BLASTX nr result

ID: Papaver23_contig00003878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003878
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...   283   6e-74
ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...   283   6e-74
emb|CBI22679.3| unnamed protein product [Vitis vinifera]              283   6e-74
ref|NP_567724.1| rRNA 2'-O-methyltransferase fibrillarin 2 [Arab...   283   6e-74
gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsi...   283   8e-74

>ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 2
           [Vitis vinifera]
          Length = 316

 Score =  283 bits (725), Expect = 6e-74
 Identities = 141/150 (94%), Positives = 144/150 (96%)
 Frame = -1

Query: 592 GATVSHVSDLVGPTGVVYVVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 413
           G TVSHVSD+VGPTGVVY VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV
Sbjct: 164 GTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 223

Query: 412 DVIFSDVAQPDQARILALNASFFLKNGGHFVISIKANCIDSTVPAEAVFAQEVKKLQQDQ 233
           DVIFSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTVPAEAVFAQEVKKLQ D 
Sbjct: 224 DVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQADM 283

Query: 232 FKPSEQVTLEPFERDHACVVGGYRVPKKPK 143
           FKPSEQVTLEPFERDHACVVGGYR+PKK K
Sbjct: 284 FKPSEQVTLEPFERDHACVVGGYRMPKKQK 313


>ref|XP_002271480.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 1
           [Vitis vinifera]
          Length = 311

 Score =  283 bits (725), Expect = 6e-74
 Identities = 141/150 (94%), Positives = 144/150 (96%)
 Frame = -1

Query: 592 GATVSHVSDLVGPTGVVYVVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 413
           G TVSHVSD+VGPTGVVY VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV
Sbjct: 159 GTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 218

Query: 412 DVIFSDVAQPDQARILALNASFFLKNGGHFVISIKANCIDSTVPAEAVFAQEVKKLQQDQ 233
           DVIFSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTVPAEAVFAQEVKKLQ D 
Sbjct: 219 DVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQADM 278

Query: 232 FKPSEQVTLEPFERDHACVVGGYRVPKKPK 143
           FKPSEQVTLEPFERDHACVVGGYR+PKK K
Sbjct: 279 FKPSEQVTLEPFERDHACVVGGYRMPKKQK 308


>emb|CBI22679.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  283 bits (725), Expect = 6e-74
 Identities = 141/150 (94%), Positives = 144/150 (96%)
 Frame = -1

Query: 592 GATVSHVSDLVGPTGVVYVVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 413
           G TVSHVSD+VGPTGVVY VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV
Sbjct: 93  GTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 152

Query: 412 DVIFSDVAQPDQARILALNASFFLKNGGHFVISIKANCIDSTVPAEAVFAQEVKKLQQDQ 233
           DVIFSDVAQPDQARILALNAS+FLK GGHFVISIKANCIDSTVPAEAVFAQEVKKLQ D 
Sbjct: 153 DVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQEVKKLQADM 212

Query: 232 FKPSEQVTLEPFERDHACVVGGYRVPKKPK 143
           FKPSEQVTLEPFERDHACVVGGYR+PKK K
Sbjct: 213 FKPSEQVTLEPFERDHACVVGGYRMPKKQK 242


>ref|NP_567724.1| rRNA 2'-O-methyltransferase fibrillarin 2 [Arabidopsis thaliana]
           gi|67461067|sp|Q94AH9.2|MD36A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           36a; AltName: Full=Fibrillarin-like protein 2; AltName:
           Full=rRNA 2'-O-methyltransferase fibrillarin 2
           gi|9965655|gb|AAG10104.1|AF233444_1 fibrillarin 2
           [Arabidopsis thaliana] gi|4914455|emb|CAB43694.1|
           fibrillarin-like protein [Arabidopsis thaliana]
           gi|7269413|emb|CAB81373.1| fibrillarin-like protein
           [Arabidopsis thaliana] gi|9965796|gb|AAG10153.1|
           fibrillarin 2 [Arabidopsis thaliana]
           gi|21536840|gb|AAM61172.1| fibrillarin 2 (AtFib2)
           [Arabidopsis thaliana] gi|23297150|gb|AAN13105.1|
           fibrillarin 2 (AtFib2) [Arabidopsis thaliana]
           gi|332659685|gb|AEE85085.1| rRNA 2'-O-methyltransferase
           fibrillarin 2 [Arabidopsis thaliana]
          Length = 320

 Score =  283 bits (725), Expect = 6e-74
 Identities = 140/151 (92%), Positives = 145/151 (96%)
 Frame = -1

Query: 592 GATVSHVSDLVGPTGVVYVVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 413
           G TVSHVSDLVGP G VY VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV
Sbjct: 166 GTTVSHVSDLVGPEGCVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 225

Query: 412 DVIFSDVAQPDQARILALNASFFLKNGGHFVISIKANCIDSTVPAEAVFAQEVKKLQQDQ 233
           DVIFSDVAQPDQARILALNAS+FLK+GGHFVISIKANCIDSTVPAEAVF  EVKKLQQ+Q
Sbjct: 226 DVIFSDVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQ 285

Query: 232 FKPSEQVTLEPFERDHACVVGGYRVPKKPKA 140
           FKP+EQVTLEPFERDHACVVGGYR+PKKPKA
Sbjct: 286 FKPAEQVTLEPFERDHACVVGGYRMPKKPKA 316


>gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsis thaliana]
          Length = 320

 Score =  283 bits (724), Expect = 8e-74
 Identities = 140/151 (92%), Positives = 145/151 (96%)
 Frame = -1

Query: 592 GATVSHVSDLVGPTGVVYVVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 413
           G TVSHVSDLVGP G VY VEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV
Sbjct: 166 GTTVSHVSDLVGPEGSVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMV 225

Query: 412 DVIFSDVAQPDQARILALNASFFLKNGGHFVISIKANCIDSTVPAEAVFAQEVKKLQQDQ 233
           DVIFSDVAQPDQARILALNAS+FLK+GGHFVISIKANCIDSTVPAEAVF  EVKKLQQ+Q
Sbjct: 226 DVIFSDVAQPDQARILALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQ 285

Query: 232 FKPSEQVTLEPFERDHACVVGGYRVPKKPKA 140
           FKP+EQVTLEPFERDHACVVGGYR+PKKPKA
Sbjct: 286 FKPAEQVTLEPFERDHACVVGGYRMPKKPKA 316


Top