BLASTX nr result
ID: Papaver23_contig00003822
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00003822 (570 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Gl... 59 3e-10 ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Gl... 59 3e-10 emb|CBI34367.3| unnamed protein product [Vitis vinifera] 58 7e-10 ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi... 58 7e-10 ref|XP_002299520.1| predicted protein [Populus trichocarpa] gi|2... 51 8e-08 >ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max] Length = 768 Score = 58.9 bits (141), Expect(2) = 3e-10 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%) Frame = +2 Query: 5 GEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142 GE+EGT DELL+ E+AAV EE E +F +DPSQVEN + RCLP+ L Sbjct: 205 GEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNAL 251 Score = 30.8 bits (68), Expect(2) = 3e-10 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +1 Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192 L NYPMLE YDFRN+TV D Sbjct: 247 LPNALNYPMLEEYDFRNDTVNPD 269 >ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max] Length = 768 Score = 58.9 bits (141), Expect(2) = 3e-10 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%) Frame = +2 Query: 5 GEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142 GE+EGT DELL+ E+AAV EE E +F +DPSQVEN + RCLP+ L Sbjct: 205 GEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNAL 251 Score = 30.8 bits (68), Expect(2) = 3e-10 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +1 Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192 L NYPMLE YDFRN+TV D Sbjct: 247 LPNALNYPMLEEYDFRNDTVNPD 269 >emb|CBI34367.3| unnamed protein product [Vitis vinifera] Length = 850 Score = 57.8 bits (138), Expect(2) = 7e-10 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%) Frame = +2 Query: 2 IGEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142 +GE+EG DEL++ ELAA EE ET +F VDP+QVEN + RCLP+ L Sbjct: 286 VGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNAL 333 Score = 30.8 bits (68), Expect(2) = 7e-10 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +1 Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192 L NYPMLE YDFRN+TV D Sbjct: 329 LPNALNYPMLEEYDFRNDTVNPD 351 >ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera] Length = 771 Score = 57.8 bits (138), Expect(2) = 7e-10 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%) Frame = +2 Query: 2 IGEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142 +GE+EG DEL++ ELAA EE ET +F VDP+QVEN + RCLP+ L Sbjct: 207 VGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNAL 254 Score = 30.8 bits (68), Expect(2) = 7e-10 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +1 Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192 L NYPMLE YDFRN+TV D Sbjct: 250 LPNALNYPMLEEYDFRNDTVNPD 272 >ref|XP_002299520.1| predicted protein [Populus trichocarpa] gi|222846778|gb|EEE84325.1| predicted protein [Populus trichocarpa] Length = 803 Score = 50.8 bits (120), Expect(2) = 8e-08 Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 1/47 (2%) Frame = +2 Query: 5 GEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142 GE+ + D LL+ ELAA EE ET +F VDPSQVEN + RCLP+ L Sbjct: 222 GEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNAL 268 Score = 30.8 bits (68), Expect(2) = 8e-08 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%) Frame = +1 Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192 L NYPMLE YDFRN+TV D Sbjct: 264 LPNALNYPMLEEYDFRNDTVNPD 286