BLASTX nr result

ID: Papaver23_contig00003822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003822
         (570 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Gl...    59   3e-10
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Gl...    59   3e-10
emb|CBI34367.3| unnamed protein product [Vitis vinifera]               58   7e-10
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...    58   7e-10
ref|XP_002299520.1| predicted protein [Populus trichocarpa] gi|2...    51   8e-08

>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
          Length = 768

 Score = 58.9 bits (141), Expect(2) = 3e-10
 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = +2

Query: 5   GEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142
           GE+EGT DELL+  E+AAV EE E  +F +DPSQVEN + RCLP+ L
Sbjct: 205 GEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNAL 251



 Score = 30.8 bits (68), Expect(2) = 3e-10
 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192
           L    NYPMLE YDFRN+TV  D
Sbjct: 247 LPNALNYPMLEEYDFRNDTVNPD 269


>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
          Length = 768

 Score = 58.9 bits (141), Expect(2) = 3e-10
 Identities = 29/47 (61%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
 Frame = +2

Query: 5   GEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142
           GE+EGT DELL+  E+AAV EE E  +F +DPSQVEN + RCLP+ L
Sbjct: 205 GEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNAL 251



 Score = 30.8 bits (68), Expect(2) = 3e-10
 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192
           L    NYPMLE YDFRN+TV  D
Sbjct: 247 LPNALNYPMLEEYDFRNDTVNPD 269


>emb|CBI34367.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score = 57.8 bits (138), Expect(2) = 7e-10
 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 2   IGEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142
           +GE+EG  DEL++  ELAA  EE ET +F VDP+QVEN + RCLP+ L
Sbjct: 286 VGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNAL 333



 Score = 30.8 bits (68), Expect(2) = 7e-10
 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192
           L    NYPMLE YDFRN+TV  D
Sbjct: 329 LPNALNYPMLEEYDFRNDTVNPD 351


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score = 57.8 bits (138), Expect(2) = 7e-10
 Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +2

Query: 2   IGEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142
           +GE+EG  DEL++  ELAA  EE ET +F VDP+QVEN + RCLP+ L
Sbjct: 207 VGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNAL 254



 Score = 30.8 bits (68), Expect(2) = 7e-10
 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192
           L    NYPMLE YDFRN+TV  D
Sbjct: 250 LPNALNYPMLEEYDFRNDTVNPD 272


>ref|XP_002299520.1| predicted protein [Populus trichocarpa] gi|222846778|gb|EEE84325.1|
           predicted protein [Populus trichocarpa]
          Length = 803

 Score = 50.8 bits (120), Expect(2) = 8e-08
 Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
 Frame = +2

Query: 5   GEVEGTRDELLSAVELAAV-EENETPAFAVDPSQVENAQ*RCLPSTL 142
           GE+  + D LL+  ELAA  EE ET +F VDPSQVEN + RCLP+ L
Sbjct: 222 GEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNAL 268



 Score = 30.8 bits (68), Expect(2) = 8e-08
 Identities = 15/23 (65%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = +1

Query: 127 LAKYFNYPMLE-YDFRNNTVEQD 192
           L    NYPMLE YDFRN+TV  D
Sbjct: 264 LPNALNYPMLEEYDFRNDTVNPD 286


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