BLASTX nr result

ID: Papaver23_contig00003658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003658
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop...   326   4e-87
ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|2...   316   4e-84
ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chlorop...   312   6e-83
ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop...   309   6e-82
ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chlorop...   303   4e-80

>ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis
           vinifera] gi|297739290|emb|CBI28941.3| unnamed protein
           product [Vitis vinifera]
          Length = 226

 Score =  326 bits (836), Expect = 4e-87
 Identities = 163/215 (75%), Positives = 181/215 (84%), Gaps = 1/215 (0%)
 Frame = +2

Query: 26  MASYLTGSFQTCNFRSVFLGETSGMHVCSTPTTRIGFLRKAIECKDSRIGKNPIEVPSTV 205
           MAS +T SFQT N RS FLGE +G++V S P TR+GFLRK IECK+SRIGK PIEVPS V
Sbjct: 1   MASSITPSFQTSNLRSAFLGERNGIYVSSVPVTRVGFLRKTIECKESRIGKKPIEVPSNV 60

Query: 206 TILLEGQDLKVKGPLGELSRTYPREVKVERVDS-VLKVTKAMDTRRANQMHGLFRTLTDN 382
           TI LEGQDLKVKGPLGELSRTYPREVKV++ +S +L V KA +TRRANQMHGLFRTLTDN
Sbjct: 61  TITLEGQDLKVKGPLGELSRTYPREVKVQKDESGILTVKKAFETRRANQMHGLFRTLTDN 120

Query: 383 MVVGVSKGFDKKLQLVGVGYRAXXXXXXXXXXXXFSHPVKMPIPDGIQVKVEENTRITVS 562
           MVVGVSKGF+K+LQLVGVGYRA            FSHPV+MPIP  ++VKVE+NTRI VS
Sbjct: 121 MVVGVSKGFEKRLQLVGVGYRATVEGKDLVLNLGFSHPVRMPIPGDLKVKVEDNTRIIVS 180

Query: 563 GYDKCAIGQFAASIRKWRPPEPYKGKGVKYADEIV 667
           GYDKC IGQFAAS+RKWRPPEPYKGKGVKYADEIV
Sbjct: 181 GYDKCNIGQFAASVRKWRPPEPYKGKGVKYADEIV 215


>ref|XP_002320459.1| predicted protein [Populus trichocarpa] gi|222861232|gb|EEE98774.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  316 bits (810), Expect = 4e-84
 Identities = 158/214 (73%), Positives = 181/214 (84%), Gaps = 1/214 (0%)
 Frame = +2

Query: 29  ASYLTGSFQTCNFRSVFLGETSGMHVCSTPTTRIGFLRKAIECKDSRIGKNPIEVPSTVT 208
           +S +T SFQT N RSVFLGE + + V S P TRIGFLRKAIECK+SRIGK PI+VPS VT
Sbjct: 3   SSSITSSFQTSNLRSVFLGERNRICVPSVPVTRIGFLRKAIECKESRIGKQPIQVPSNVT 62

Query: 209 ILLEGQDLKVKGPLGELSRTYPREVKVER-VDSVLKVTKAMDTRRANQMHGLFRTLTDNM 385
           I LEGQDLKVKGPLGELSRTYPREVK+ER  D +++V KA++TRRANQMHGLFRTLTDNM
Sbjct: 63  IKLEGQDLKVKGPLGELSRTYPREVKLERDEDGIIRVKKALETRRANQMHGLFRTLTDNM 122

Query: 386 VVGVSKGFDKKLQLVGVGYRAXXXXXXXXXXXXFSHPVKMPIPDGIQVKVEENTRITVSG 565
           VVGVSKGF+K+LQLVGVGYRA            FSHPV+M IP  +QVKVEENTRI VSG
Sbjct: 123 VVGVSKGFEKRLQLVGVGYRANVEGKDLVLSLGFSHPVRMAIPATLQVKVEENTRIVVSG 182

Query: 566 YDKCAIGQFAASIRKWRPPEPYKGKGVKYADEIV 667
           +DKC+IG+FAASIR+WRPPEPYKGKGV+YA+EI+
Sbjct: 183 FDKCSIGEFAASIRRWRPPEPYKGKGVRYANEII 216


>ref|XP_004144493.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cucumis
           sativus] gi|449515641|ref|XP_004164857.1| PREDICTED: 50S
           ribosomal protein L6, chloroplastic-like [Cucumis
           sativus]
          Length = 233

 Score =  312 bits (800), Expect = 6e-83
 Identities = 155/203 (76%), Positives = 172/203 (84%), Gaps = 1/203 (0%)
 Frame = +2

Query: 62  NFRSVFLGETSGMHVCSTPTTRIGFLRKAIECKDSRIGKNPIEVPSTVTILLEGQDLKVK 241
           NFRS FLGE +G  V + P   IG LRK IECK+SRIGK PI+VPS+VTI L+GQDLKVK
Sbjct: 20  NFRSTFLGEKNGFCVSAMPACHIGLLRKTIECKESRIGKQPIQVPSSVTITLQGQDLKVK 79

Query: 242 GPLGELSRTYPREVKVERVDS-VLKVTKAMDTRRANQMHGLFRTLTDNMVVGVSKGFDKK 418
           GPLGELS  YPREVK+ER DS +++V KA++TRRANQMHGLFRTLTDNMVVGVSKGF+KK
Sbjct: 80  GPLGELSILYPREVKIEREDSGIIRVKKALETRRANQMHGLFRTLTDNMVVGVSKGFEKK 139

Query: 419 LQLVGVGYRAXXXXXXXXXXXXFSHPVKMPIPDGIQVKVEENTRITVSGYDKCAIGQFAA 598
           LQL+GVGYRA            FSHPV+M IPDGIQ+KVEENTRITVSGYDKCAIGQFAA
Sbjct: 140 LQLIGVGYRAMVEGKDLVLNLGFSHPVRMAIPDGIQIKVEENTRITVSGYDKCAIGQFAA 199

Query: 599 SIRKWRPPEPYKGKGVKYADEIV 667
           SIR+WRPPEPYKGKGVKYADEIV
Sbjct: 200 SIRQWRPPEPYKGKGVKYADEIV 222


>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
           [Glycine max]
          Length = 226

 Score =  309 bits (791), Expect = 6e-82
 Identities = 154/215 (71%), Positives = 176/215 (81%), Gaps = 1/215 (0%)
 Frame = +2

Query: 26  MASYLTGSFQTCNFRSVFLGETSGMHVCSTPTTRIGFLRKAIECKDSRIGKNPIEVPSTV 205
           MAS +T SF+  N +SVF+GET+ + V S P   +GF RK +ECK+SRIGK PI VPS V
Sbjct: 1   MASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 60

Query: 206 TILLEGQDLKVKGPLGELSRTYPREVKVERVDS-VLKVTKAMDTRRANQMHGLFRTLTDN 382
           T+ LEGQD++VKGPLGEL+ TYPREV VER +S  L+V KA++TRRANQMHGLFRTLTDN
Sbjct: 61  TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 120

Query: 383 MVVGVSKGFDKKLQLVGVGYRAXXXXXXXXXXXXFSHPVKMPIPDGIQVKVEENTRITVS 562
           +V+GVSKGFDKKLQLVGVGYRA            FSHPVKM IPDG++VKVEENTRITVS
Sbjct: 121 LVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVS 180

Query: 563 GYDKCAIGQFAASIRKWRPPEPYKGKGVKYADEIV 667
           GYDK  +GQFAASIRKWRPPEPYKGKGVKYADEIV
Sbjct: 181 GYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIV 215


>ref|XP_003548188.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 2
           [Glycine max]
          Length = 223

 Score =  303 bits (776), Expect = 4e-80
 Identities = 154/215 (71%), Positives = 175/215 (81%), Gaps = 1/215 (0%)
 Frame = +2

Query: 26  MASYLTGSFQTCNFRSVFLGETSGMHVCSTPTTRIGFLRKAIECKDSRIGKNPIEVPSTV 205
           MAS +T SF+    RSVF+GET+ + V S P   +GF RK +ECK+SRIGK PI VPS V
Sbjct: 1   MASSVTSSFR---IRSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 57

Query: 206 TILLEGQDLKVKGPLGELSRTYPREVKVERVDS-VLKVTKAMDTRRANQMHGLFRTLTDN 382
           T+ LEGQD++VKGPLGEL+ TYPREV VER +S  L+V KA++TRRANQMHGLFRTLTDN
Sbjct: 58  TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFRTLTDN 117

Query: 383 MVVGVSKGFDKKLQLVGVGYRAXXXXXXXXXXXXFSHPVKMPIPDGIQVKVEENTRITVS 562
           +V+GVSKGFDKKLQLVGVGYRA            FSHPVKM IPDG++VKVEENTRITVS
Sbjct: 118 LVIGVSKGFDKKLQLVGVGYRAMVEGNEVVLNLGFSHPVKMTIPDGLKVKVEENTRITVS 177

Query: 563 GYDKCAIGQFAASIRKWRPPEPYKGKGVKYADEIV 667
           GYDK  +GQFAASIRKWRPPEPYKGKGVKYADEIV
Sbjct: 178 GYDKSEVGQFAASIRKWRPPEPYKGKGVKYADEIV 212


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