BLASTX nr result

ID: Papaver23_contig00003511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003511
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510207.1| fms interacting protein, putative [Ricinus c...   137   7e-31
emb|CBI19511.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002284804.1| PREDICTED: THO complex subunit 5 homolog [Vi...   132   3e-29
ref|XP_002327149.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003603050.1| THO complex subunit-like protein [Medicago t...   125   3e-27

>ref|XP_002510207.1| fms interacting protein, putative [Ricinus communis]
           gi|223550908|gb|EEF52394.1| fms interacting protein,
           putative [Ricinus communis]
          Length = 808

 Score =  137 bits (346), Expect = 7e-31
 Identities = 75/124 (60%), Positives = 83/124 (66%), Gaps = 8/124 (6%)
 Frame = -3

Query: 374 PHQSAKLCAGDVVAYN-------YKWAQHLAGIDFLPEVSPLLTALEGQSSSAVKSAAIT 216
           PHQSAKL  GD  A++       YKWAQHLAGIDFLPEV+PLL+  E  SS   K+  ++
Sbjct: 392 PHQSAKLFVGDAPAFDETRTSRPYKWAQHLAGIDFLPEVAPLLSGHETASSETAKNDVVS 451

Query: 215 SV-LSRQQNRVLTVFQRIRSSKRDQLALAEQLDSFTKLMWPSLNNADVPWALHTRSFNLK 39
            + L RQQNRV TV QRIRS KR QLAL EQLDS  KL WPSLN   VPWALH    NL 
Sbjct: 452 GLSLYRQQNRVQTVVQRIRSRKRAQLALVEQLDSLVKLKWPSLNCESVPWALHAPLCNLD 511

Query: 38  SWLR 27
            W R
Sbjct: 512 GWSR 515


>emb|CBI19511.3| unnamed protein product [Vitis vinifera]
          Length = 780

 Score =  132 bits (332), Expect = 3e-29
 Identities = 72/123 (58%), Positives = 82/123 (66%), Gaps = 9/123 (7%)
 Frame = -3

Query: 374 PHQSAKLCAGDVVAYN-------YKWAQHLAGIDFLPEVSPLLTALEGQSSSAVKSAAIT 216
           P QSAKL  G+  A++       YKWAQHLAGIDFLPEVSPLLT  E  SS   K+A + 
Sbjct: 357 PRQSAKLFIGNARAFDERRTSRPYKWAQHLAGIDFLPEVSPLLTCSETPSSETAKNATVV 416

Query: 215 SVLS--RQQNRVLTVFQRIRSSKRDQLALAEQLDSFTKLMWPSLNNADVPWALHTRSFNL 42
           S LS  RQQNRV TV QRIRS K+ QLAL EQLDS  KL WP+++   +PWALHT   N 
Sbjct: 417 SGLSLYRQQNRVQTVVQRIRSRKKAQLALVEQLDSLMKLKWPTVSCKSIPWALHTPLCNF 476

Query: 41  KSW 33
             W
Sbjct: 477 NGW 479


>ref|XP_002284804.1| PREDICTED: THO complex subunit 5 homolog [Vitis vinifera]
          Length = 816

 Score =  132 bits (332), Expect = 3e-29
 Identities = 72/123 (58%), Positives = 82/123 (66%), Gaps = 9/123 (7%)
 Frame = -3

Query: 374 PHQSAKLCAGDVVAYN-------YKWAQHLAGIDFLPEVSPLLTALEGQSSSAVKSAAIT 216
           P QSAKL  G+  A++       YKWAQHLAGIDFLPEVSPLLT  E  SS   K+A + 
Sbjct: 393 PRQSAKLFIGNARAFDERRTSRPYKWAQHLAGIDFLPEVSPLLTCSETPSSETAKNATVV 452

Query: 215 SVLS--RQQNRVLTVFQRIRSSKRDQLALAEQLDSFTKLMWPSLNNADVPWALHTRSFNL 42
           S LS  RQQNRV TV QRIRS K+ QLAL EQLDS  KL WP+++   +PWALHT   N 
Sbjct: 453 SGLSLYRQQNRVQTVVQRIRSRKKAQLALVEQLDSLMKLKWPTVSCKSIPWALHTPLCNF 512

Query: 41  KSW 33
             W
Sbjct: 513 NGW 515


>ref|XP_002327149.1| predicted protein [Populus trichocarpa] gi|222835464|gb|EEE73899.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score =  130 bits (326), Expect = 1e-28
 Identities = 72/123 (58%), Positives = 80/123 (65%), Gaps = 9/123 (7%)
 Frame = -3

Query: 374 PHQSAKLCAGDVVAYN-------YKWAQHLAGIDFLPEVSPLLTALEGQSSSAVKSAAIT 216
           P QSAKL  GD +A++       YKW QHLAGIDFLPE +PLL+ LE  SS   K+  + 
Sbjct: 287 PQQSAKLIVGDNLAFDERRTSRPYKWVQHLAGIDFLPETAPLLSDLETASSETAKNEIVL 346

Query: 215 SVLS--RQQNRVLTVFQRIRSSKRDQLALAEQLDSFTKLMWPSLNNADVPWALHTRSFNL 42
           S LS  RQQNRV TV QRIRS KR QLAL EQL+S  KL WP LN   VPW LHT   NL
Sbjct: 347 SGLSLYRQQNRVQTVVQRIRSRKRAQLALVEQLESLMKLEWPPLNCESVPWVLHTPLCNL 406

Query: 41  KSW 33
             W
Sbjct: 407 HGW 409


>ref|XP_003603050.1| THO complex subunit-like protein [Medicago truncatula]
           gi|355492098|gb|AES73301.1| THO complex subunit-like
           protein [Medicago truncatula]
          Length = 807

 Score =  125 bits (315), Expect = 3e-27
 Identities = 72/123 (58%), Positives = 82/123 (66%), Gaps = 9/123 (7%)
 Frame = -3

Query: 374 PHQSAKLCAGDVVAYN-------YKWAQHLAGIDFLPEVSPLLTALEGQSSSAVKSAAIT 216
           PHQSAKL   + +A+N       YKWAQHLAGIDFLPEVSPLL A    +S A KS  + 
Sbjct: 402 PHQSAKLFVQNAMAFNTQRTSRPYKWAQHLAGIDFLPEVSPLLPA---DNSEAAKSEDVV 458

Query: 215 SVLS--RQQNRVLTVFQRIRSSKRDQLALAEQLDSFTKLMWPSLNNADVPWALHTRSFNL 42
           S L+  RQQNRV TV QRIRS ++ QLAL EQL+S TKL WP L+   VPWALHT    L
Sbjct: 459 SGLTLYRQQNRVHTVLQRIRSRRKAQLALLEQLESLTKLEWPLLSCKSVPWALHTPLCKL 518

Query: 41  KSW 33
             W
Sbjct: 519 DGW 521


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