BLASTX nr result

ID: Papaver23_contig00003490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003490
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein o...   473   e-131
ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [P...   467   e-129
ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycin...   461   e-127
ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein o...   459   e-127
ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein o...   457   e-126

>ref|XP_002276647.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
            chloroplastic [Vitis vinifera]
            gi|297745621|emb|CBI40786.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  473 bits (1218), Expect = e-131
 Identities = 218/280 (77%), Positives = 251/280 (89%)
 Frame = +1

Query: 172  CRSSWKEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMLITKNASLQNSSYFKDLADKAR 351
            C++SW+E+AGV+IFSAIPFTAVKAIANS +G++LQSRM   K A+++NSS FK LA+KA+
Sbjct: 45   CKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQSRMEENKKAAVKNSSKFKALAEKAK 104

Query: 352  QASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 531
              S WYGE+RPRWLGPIP++YP+YL+GELPGDYGFDIAGL KDPVAFQKYFNFEILHARW
Sbjct: 105  NESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILHARW 164

Query: 532  AMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVIS 711
            AML ALGAL+PELLDL G  HFVEP+WW+VGY+KL+GDTLDYLGIPG H AGSQGV+VI+
Sbjct: 165  AMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVIVIA 224

Query: 712  ICQALLMVGPEYARYCGIEALEPLGIYLPGDSNYPGGGLFDPLGLSKDPEAFAELKVKEI 891
            ICQALLMVGPEYARYCGIEALEPLGIYLPGD NYPGG LFDPL LSKDP AF ELKVKEI
Sbjct: 225  ICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEI 284

Query: 892  KNGRLAMFSMFGFFVQAIVTGKGPIQNLLEHISDPLHINI 1011
            KNGRLAM +  GF++QA  TGKGP+QNLL+H++DP H N+
Sbjct: 285  KNGRLAMVAWLGFYIQAAATGKGPVQNLLDHLADPFHNNL 324


>ref|XP_002307004.1| light-harvesting complex II protein Lhcb7 [Populus trichocarpa]
            gi|222856453|gb|EEE94000.1| light-harvesting complex II
            protein Lhcb7 [Populus trichocarpa]
          Length = 338

 Score =  467 bits (1201), Expect = e-129
 Identities = 215/280 (76%), Positives = 251/280 (89%)
 Frame = +1

Query: 172  CRSSWKEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMLITKNASLQNSSYFKDLADKAR 351
            C++SW+E+AGVVIFSAIPFTAVKAIANS +G++LQ R+   K  ++Q SS FK LA KAR
Sbjct: 52   CKASWQELAGVVIFSAIPFTAVKAIANSPLGESLQRRLEERKKLAVQQSSKFKALAQKAR 111

Query: 352  QASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARW 531
            + SFWYGE+RPRWLGPI ++YP+YLSGELPGDYGFD+AGL++DPVAFQ+YFNFEILHARW
Sbjct: 112  KESFWYGEERPRWLGPISYQYPTYLSGELPGDYGFDVAGLAEDPVAFQRYFNFEILHARW 171

Query: 532  AMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVIS 711
            AML ALGALIPE+LDLSG  HF+EP+WW+VGY+KL+GDTLDYLGIPGLH AG QGVLVI+
Sbjct: 172  AMLAALGALIPEVLDLSGAFHFIEPVWWRVGYSKLKGDTLDYLGIPGLHFAGGQGVLVIA 231

Query: 712  ICQALLMVGPEYARYCGIEALEPLGIYLPGDSNYPGGGLFDPLGLSKDPEAFAELKVKEI 891
             CQA+LMVGPEYARYCGIEALEPLGIYLPGD NYPGG LFDPL LSKDP +F ELKVKEI
Sbjct: 232  FCQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGILFDPLNLSKDPVSFEELKVKEI 291

Query: 892  KNGRLAMFSMFGFFVQAIVTGKGPIQNLLEHISDPLHINI 1011
            KNGRLAM +  GF++QA +TGKGP++NL+EHISDPLH N+
Sbjct: 292  KNGRLAMVAWLGFYIQAALTGKGPVENLVEHISDPLHNNL 331


>ref|NP_001240088.1| uncharacterized protein LOC100786260 [Glycine max]
            gi|255636882|gb|ACU18774.1| unknown [Glycine max]
          Length = 331

 Score =  461 bits (1186), Expect = e-127
 Identities = 215/278 (77%), Positives = 247/278 (88%)
 Frame = +1

Query: 178  SSWKEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMLITKNASLQNSSYFKDLADKARQA 357
            +SW+E+AGV++FSAIPFTAVKAIANS +G++LQ +M   K  +++NSS FK LA KAR+ 
Sbjct: 43   ASWQELAGVLLFSAIPFTAVKAIANSPLGESLQRKMEERKTFAVENSSTFKALAGKARKE 102

Query: 358  SFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHARWAM 537
            SFWYGEDRPRWLGPI +EYPSYL+GELPGDYGFDIAGL +DPVA QKYFNFEILHARWAM
Sbjct: 103  SFWYGEDRPRWLGPISYEYPSYLTGELPGDYGFDIAGLGQDPVALQKYFNFEILHARWAM 162

Query: 538  LGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVISIC 717
            L ++GALIPE+LDL G  HFVEP+WW+VGY+KL+GDTLDYLGI GLH AGSQGV+VI+IC
Sbjct: 163  LASVGALIPEILDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIQGLHFAGSQGVVVIAIC 222

Query: 718  QALLMVGPEYARYCGIEALEPLGIYLPGDSNYPGGGLFDPLGLSKDPEAFAELKVKEIKN 897
            QALLMVGPEYARYCGIEALEPLGIYLPGD NYPGG LFDPL LS DPEAF ELKVKEIKN
Sbjct: 223  QALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSNDPEAFEELKVKEIKN 282

Query: 898  GRLAMFSMFGFFVQAIVTGKGPIQNLLEHISDPLHINI 1011
            GRLAM +  GF+VQA +TGKGP+QNL++HISDP H N+
Sbjct: 283  GRLAMVAWLGFYVQAALTGKGPVQNLIDHISDPFHNNL 320


>ref|XP_004169873.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
            chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  459 bits (1181), Expect = e-127
 Identities = 212/280 (75%), Positives = 250/280 (89%)
 Frame = +1

Query: 169  SCRSSWKEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMLITKNASLQNSSYFKDLADKA 348
            +CR+SW+E+AGV+IFSAIPFTAVKAIANS +G +LQ ++   KN+++ NSS FK LA++A
Sbjct: 48   TCRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEA 107

Query: 349  RQASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHAR 528
            R+ S WYGE+RPRWLGP+P++YP YL+GELPGDYGFDIAGLS+DPVAFQK+FNFEILHAR
Sbjct: 108  RKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHAR 167

Query: 529  WAMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVI 708
            WAML +LGAL+PE+LD+ G  HF EPIWW+VGY+KL+GDTLDYLGIPGLH+AGSQGV+VI
Sbjct: 168  WAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVI 227

Query: 709  SICQALLMVGPEYARYCGIEALEPLGIYLPGDSNYPGGGLFDPLGLSKDPEAFAELKVKE 888
            +ICQA+LMVGPEYARYCGIEALEPLGIYLPGD NYPGG LFDPL LSKD EAF ELKVKE
Sbjct: 228  AICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAEAFEELKVKE 287

Query: 889  IKNGRLAMFSMFGFFVQAIVTGKGPIQNLLEHISDPLHIN 1008
            IKNGRLAM +  GF+ QA +TGKGP+QNLL HI+DP H N
Sbjct: 288  IKNGRLAMVAWLGFYSQAALTGKGPVQNLLNHIADPFHNN 327


>ref|XP_004145567.1| PREDICTED: chlorophyll a-b binding protein of LHCII type I,
            chloroplastic-like [Cucumis sativus]
          Length = 338

 Score =  457 bits (1177), Expect = e-126
 Identities = 211/280 (75%), Positives = 250/280 (89%)
 Frame = +1

Query: 169  SCRSSWKEIAGVVIFSAIPFTAVKAIANSSIGQTLQSRMLITKNASLQNSSYFKDLADKA 348
            +CR+SW+E+AGV+IFSAIPFTAVKAIANS +G +LQ ++   KN+++ NSS FK LA++A
Sbjct: 48   TCRASWQELAGVLIFSAIPFTAVKAIANSPLGGSLQRQLEKKKNSAVANSSKFKALAEEA 107

Query: 349  RQASFWYGEDRPRWLGPIPFEYPSYLSGELPGDYGFDIAGLSKDPVAFQKYFNFEILHAR 528
            R+ S WYGE+RPRWLGP+P++YP YL+GELPGDYGFDIAGLS+DPVAFQK+FNFEILHAR
Sbjct: 108  RKDSSWYGEERPRWLGPLPYDYPKYLTGELPGDYGFDIAGLSEDPVAFQKFFNFEILHAR 167

Query: 529  WAMLGALGALIPELLDLSGVIHFVEPIWWKVGYAKLQGDTLDYLGIPGLHIAGSQGVLVI 708
            WAML +LGAL+PE+LD+ G  HF EPIWW+VGY+KL+GDTLDYLGIPGLH+AGSQGV+VI
Sbjct: 168  WAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVI 227

Query: 709  SICQALLMVGPEYARYCGIEALEPLGIYLPGDSNYPGGGLFDPLGLSKDPEAFAELKVKE 888
            +ICQA+LMVGPEYARYCGIEALEPLGIYLPGD NYPGG LFDPL LSKD  AF ELKVKE
Sbjct: 228  AICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKE 287

Query: 889  IKNGRLAMFSMFGFFVQAIVTGKGPIQNLLEHISDPLHIN 1008
            IKNGRLAM +  GF+ QA +TGKGP+QNLL+HI+DP H N
Sbjct: 288  IKNGRLAMVAWLGFYSQAALTGKGPVQNLLDHIADPFHNN 327


Top