BLASTX nr result

ID: Papaver23_contig00003489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003489
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloro...   144   2e-32
ref|XP_002317427.1| predicted protein [Populus trichocarpa] gi|2...   144   2e-32
sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, ...   143   3e-32
ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloro...   135   9e-30
ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precu...   134   1e-29

>ref|XP_002274637.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Vitis
           vinifera]
          Length = 148

 Score =  144 bits (363), Expect = 2e-32
 Identities = 76/134 (56%), Positives = 95/134 (70%)
 Frame = -1

Query: 628 VPSASLTFLAGGRRTTTSSINVTKPYTHSGLLHCXXXXXXXXXXXXXXXXXXSLGVNLDM 449
           VPSASL+ LAG +R + +S+N+    T   LLHC                   LG++L+ 
Sbjct: 15  VPSASLSLLAGSKRRSLASLNMRNNPTSPALLHCSFTPTVSLSFPSSFSGLS-LGLDLNS 73

Query: 448 NKGLIRDRSRGLVVRAGKAALCLTKRSRSRKSLARTHGFRLRMRTTGGRAILKRRRAKGR 269
           + G+ ++R  GLVVRAGKAALC TKR+RSRKSLARTHGFR RMRTT GRA+LKRRRAKGR
Sbjct: 74  SVGVRKERGHGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKGR 133

Query: 268 HILCTKTNPNTGKR 227
            +LCTK+NP++GKR
Sbjct: 134 KVLCTKSNPSSGKR 147


>ref|XP_002317427.1| predicted protein [Populus trichocarpa] gi|222860492|gb|EEE98039.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score =  144 bits (362), Expect = 2e-32
 Identities = 80/132 (60%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
 Frame = -1

Query: 622 SASLTFLAGGRRTTTSSINV-TKPYTHSGLLHCXXXXXXXXXXXXXXXXXXSLGVNLDMN 446
           SASL+ ++G R     S+NV T   T SGLLHC                   LG++L+ N
Sbjct: 1   SASLSLISGSRTKRGFSMNVATNSTTRSGLLHCSFLPSSSLSLPSSFSGLS-LGLDLNSN 59

Query: 445 KGLIRDRSRGLVVRAGKAALCLTKRSRSRKSLARTHGFRLRMRTTGGRAILKRRRAKGRH 266
            G+ +D  RGLVVRAGKAALCLTKRSRSRKSLARTHGFR RMRTT GRA+LKRRRAKGR 
Sbjct: 60  IGVRKDIGRGLVVRAGKAALCLTKRSRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKGRK 119

Query: 265 ILCTKTNPNTGK 230
           +LCTK+NPN+GK
Sbjct: 120 VLCTKSNPNSGK 131


>sp|P82244.1|RK34_SPIOL RecName: Full=50S ribosomal protein L34, chloroplastic; AltName:
           Full=CL34; Flags: Precursor gi|189096152|pdb|3BBO|4
           Chain 4, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|7578860|gb|AAF64157.1|AF238221_1
           plastid ribosomal protein L34 precursor [Spinacia
           oleracea]
          Length = 152

 Score =  143 bits (361), Expect = 3e-32
 Identities = 80/135 (59%), Positives = 90/135 (66%)
 Frame = -1

Query: 631 QVPSASLTFLAGGRRTTTSSINVTKPYTHSGLLHCXXXXXXXXXXXXXXXXXXSLGVNLD 452
           + PSASLTF+ G R TT   ++       SG LHC                   LG++L 
Sbjct: 18  RTPSASLTFITGSR-TTNKRVSFNGGSARSGSLHCSFLAPSSSLSSNFSGLS--LGLDLT 74

Query: 451 MNKGLIRDRSRGLVVRAGKAALCLTKRSRSRKSLARTHGFRLRMRTTGGRAILKRRRAKG 272
            N G+  DR R  VVRAGKAALCLTKRSRSRKSLARTHGFRLRM TT GRA+LKRRRAKG
Sbjct: 75  SNTGVSTDRCRRFVVRAGKAALCLTKRSRSRKSLARTHGFRLRMSTTSGRALLKRRRAKG 134

Query: 271 RHILCTKTNPNTGKR 227
           R ILCTKTNP++GKR
Sbjct: 135 RKILCTKTNPSSGKR 149


>ref|XP_004134668.1| PREDICTED: 50S ribosomal protein L34, chloroplastic-like [Cucumis
           sativus] gi|449479241|ref|XP_004155546.1| PREDICTED: 50S
           ribosomal protein L34, chloroplastic-like [Cucumis
           sativus]
          Length = 155

 Score =  135 bits (340), Expect = 9e-30
 Identities = 76/136 (55%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
 Frame = -1

Query: 631 QVPSASLTFLAGGRRTTTSSIN-VTKPYTHSGLLHCXXXXXXXXXXXXXXXXXXSLGVNL 455
           +VPSASL F  G R   + S+N V      SGLLHC                   LG++ 
Sbjct: 20  RVPSASLVFSTGSRGYCSVSLNTVNNNSARSGLLHCSFLPSSSLSCSSSFSGLS-LGLDW 78

Query: 454 DMNKGLIRDRSRGLVVRAGKAALCLTKRSRSRKSLARTHGFRLRMRTTGGRAILKRRRAK 275
               G+ + + RGLVVRAGKAALC TKR+RSRKSLARTHGFR RMRTT GRA+LKRRRAK
Sbjct: 79  SSKVGVGQGKGRGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTNGRAVLKRRRAK 138

Query: 274 GRHILCTKTNPNTGKR 227
           GR +LCTK+NP++GKR
Sbjct: 139 GRKVLCTKSNPSSGKR 154


>ref|XP_002522558.1| 50S ribosomal protein L34, chloroplast precursor, putative [Ricinus
           communis] gi|223538249|gb|EEF39858.1| 50S ribosomal
           protein L34, chloroplast precursor, putative [Ricinus
           communis]
          Length = 161

 Score =  134 bits (338), Expect = 1e-29
 Identities = 76/133 (57%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
 Frame = -1

Query: 625 PSASLTFLAGGRRTTTSSINVTKPYT-HSGLLHCXXXXXXXXXXXXXXXXXXSLGVNLDM 449
           PSASL+   G R     S+NV    T  SGLLHC                   LG++L+ 
Sbjct: 28  PSASLSLSTGTRPRNKFSMNVISNSTSRSGLLHCSFLSTSSLSLSSSFSGLS-LGLDLNS 86

Query: 448 NKGLIRDRSRGLVVRAGKAALCLTKRSRSRKSLARTHGFRLRMRTTGGRAILKRRRAKGR 269
           + G+ + R  GLVVRAGKAALC TKR+RSRKSLARTHGFR RMRTT GRA+LKRRRAKGR
Sbjct: 87  STGVRKGRGYGLVVRAGKAALCQTKRNRSRKSLARTHGFRRRMRTTSGRAVLKRRRAKGR 146

Query: 268 HILCTKTNPNTGK 230
            +LCTK+NPN+GK
Sbjct: 147 KVLCTKSNPNSGK 159


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