BLASTX nr result

ID: Papaver23_contig00003486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003486
         (1363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   239   2e-60
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-60
ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   236   8e-60
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   234   3e-59
ref|XP_002533227.1| translation initiation factor if-3, putative...   230   7e-58

>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis
           sativus]
          Length = 299

 Score =  239 bits (609), Expect = 2e-60
 Identities = 116/171 (67%), Positives = 146/171 (85%)
 Frame = -1

Query: 904 DTRVIGVVSKSEAIQMAEDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSA 725
           +  ++GVVSK++AIQMAEDAELDLV+VSP+ADPPV+++MDYNK+RY           KSA
Sbjct: 126 EQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 185

Query: 724 ATRMDMKELKMGCNIDSHDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKR 545
           ATRMD+KELKMG NID HDYSVRL+AA+KFLKDGDKVK++VN+KGR++EF+N AIELI+R
Sbjct: 186 ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 245

Query: 544 FQTDIGELATEESKSFREKNIFIVLLPNKTILQKALEQPKKKEKTVEIGTS 392
           FQ ++GELATEE+K+FR++NIFIVL+PNK +LQKA E PKKK+K    G S
Sbjct: 246 FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVS 296


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
            predicted protein [Populus trichocarpa]
          Length = 278

 Score =  239 bits (609), Expect = 2e-60
 Identities = 136/273 (49%), Positives = 177/273 (64%), Gaps = 5/273 (1%)
 Frame = -1

Query: 1213 TCKPLLSRTTKPPT----YSLSSIESAIAGVRICNPDFLKIDSTHVHSIYLPSASVTAXX 1046
            +C PL++RTT   T      LSS++S + G+R+ NP+  K DS    S   PS   TA  
Sbjct: 11   SCFPLVTRTTTTKTTHYALCLSSLDSKLFGLRLHNPNLSKPDSLPCSS---PSPVTTARF 67

Query: 1045 XXXXXXXXXXXXXXXXRDMRQVEEADPCXXXXXXXXXXXXXXDARSNDTR-VIGVVSKSE 869
                             D R+  ++D                    +  + ++GVV+  +
Sbjct: 68   GGPRSY-----------DSRRPRKSDSDDDQALNISSIRSATVRLIDQQQNMVGVVTVRD 116

Query: 868  AIQMAEDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSAATRMDMKELKMG 689
            AIQMAED EL+LVIVSP+ADPPV+++MDYNK RY           KSAA+RMD+KELKMG
Sbjct: 117  AIQMAEDTELNLVIVSPDADPPVVRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMG 176

Query: 688  CNIDSHDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKRFQTDIGELATEE 509
             NID HDY VRLRAA KFLKDGDKVK++VN+KGR++EF+NNAIEL++RFQ D+GELATEE
Sbjct: 177  YNIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEE 236

Query: 508  SKSFREKNIFIVLLPNKTILQKALEQPKKKEKT 410
            SK+FR++N FI L+PNK +LQKA E PKKK+K+
Sbjct: 237  SKNFRDRNAFITLVPNKALLQKAQEPPKKKDKS 269


>ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
           IF-3-like [Cucumis sativus]
          Length = 299

 Score =  236 bits (603), Expect = 8e-60
 Identities = 115/171 (67%), Positives = 145/171 (84%)
 Frame = -1

Query: 904 DTRVIGVVSKSEAIQMAEDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSA 725
           +  ++GVVSK++AIQMAEDAELDLV+VSP+ADPPV+++MDYNK+RY           KSA
Sbjct: 126 EQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 185

Query: 724 ATRMDMKELKMGCNIDSHDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKR 545
           ATRMD+KELKMG NID HDYSVRL+AA+KFLKDGDKVK++VN+KGR++EF+N AIELI+R
Sbjct: 186 ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 245

Query: 544 FQTDIGELATEESKSFREKNIFIVLLPNKTILQKALEQPKKKEKTVEIGTS 392
           FQ ++GELATEE+K+FR++NIFIVL+PNK +LQKA E PKK +K    G S
Sbjct: 246 FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKXDKPAVNGVS 296


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
            gi|297743667|emb|CBI36550.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  234 bits (598), Expect = 3e-59
 Identities = 134/268 (50%), Positives = 169/268 (63%), Gaps = 2/268 (0%)
 Frame = -1

Query: 1207 KPLLSRTTKPPTYSLSSIESAIAGVRICNPDFLKIDS--THVHSIYLPSASVTAXXXXXX 1034
            KP + RT    +    S++S + GVR+C+P F K  S  + +H       SVTA      
Sbjct: 11   KPFIFRTKTTSSPLYFSLDSQLFGVRLCSPTFSKCRSFSSSLHR------SVTARYGGYR 64

Query: 1033 XXXXXXXXXXXXRDMRQVEEADPCXXXXXXXXXXXXXXDARSNDTRVIGVVSKSEAIQMA 854
                         D  Q  +                          ++GVVSKS+AIQMA
Sbjct: 65   SSGDAWRSRQRDSDDDQALDVSSIRSASVRLI---------DEQQNMVGVVSKSQAIQMA 115

Query: 853  EDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSAATRMDMKELKMGCNIDS 674
            EDAELDLV++SP+ADPPV+++MDYNK+RY           KSAA RMD+KELKMG NIDS
Sbjct: 116  EDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDS 175

Query: 673  HDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKRFQTDIGELATEESKSFR 494
            HDYSVRL+AA KFL+DGDKVKI+VN+KGR++EF+N AIELI+RFQ D+GELATEESK+F 
Sbjct: 176  HDYSVRLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEESKNFS 235

Query: 493  EKNIFIVLLPNKTILQKALEQPKKKEKT 410
             +NIFIVL+PNK +LQK  E  KK EK+
Sbjct: 236  VRNIFIVLVPNKALLQKGQESSKKTEKS 263


>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
            gi|223526947|gb|EEF29148.1| translation initiation factor
            if-3, putative [Ricinus communis]
          Length = 274

 Score =  230 bits (586), Expect = 7e-58
 Identities = 138/274 (50%), Positives = 171/274 (62%), Gaps = 5/274 (1%)
 Frame = -1

Query: 1216 FTCKPLLSR---TTKPPTYSLSSIESAIAGVRI--CNPDFLKIDSTHVHSIYLPSASVTA 1052
            F   PLL++    TK   + LSS+ES + G+R     PD L         I L  ASV  
Sbjct: 8    FPFNPLLTQLTTATKTTQFILSSLESKLFGLRFHCSKPDSL---------ISLSRASVVT 58

Query: 1051 XXXXXXXXXXXXXXXXXXRDMRQVEEADPCXXXXXXXXXXXXXXDARSNDTRVIGVVSKS 872
                               D     E D                D + N   ++GVV KS
Sbjct: 59   SARFGGGFRSSGDRRSRQSD----SEDDHALDISTIRSATVRLIDEQQN---MVGVVPKS 111

Query: 871  EAIQMAEDAELDLVIVSPEADPPVLKMMDYNKHRYXXXXXXXXXXXKSAATRMDMKELKM 692
            EAIQMAE+A LDLVI+SP+ADPPV+++MDYNK+RY           KSAATRMD+KELKM
Sbjct: 112  EAIQMAENAALDLVILSPDADPPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKM 171

Query: 691  GCNIDSHDYSVRLRAAEKFLKDGDKVKIVVNMKGRQHEFKNNAIELIKRFQTDIGELATE 512
            G NID HDY VRLRAA KFLKDGDKVK++VN+KGR++EF+N AIELI+RFQ D+GELATE
Sbjct: 172  GYNIDQHDYDVRLRAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATE 231

Query: 511  ESKSFREKNIFIVLLPNKTILQKALEQPKKKEKT 410
            E+K+FR++NIFI L PNK ILQK+ E PKK++K+
Sbjct: 232  ETKNFRDRNIFITLAPNKAILQKSQEPPKKRDKS 265


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