BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003394
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...    64   1e-08
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   2e-08
gb|ABN07997.1| contains similarity to reverse trancriptase , rel...    63   3e-08
ref|XP_003622120.1| Pentatricopeptide repeat-containing protein ...    62   6e-08
gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japo...    59   3e-07

>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
 Frame = +1

Query: 31  WLPTRTETLANSSHRSNTNITLVSGLINSDNKKWNL*LLQSTFDNGLV*EIVNINLYTDR 210
           WL    +    +   S  +   V+ L+  + K+WN   +   FD G   +I    L    
Sbjct: 114 WLGNHEQLTPVTELHSMWSELRVANLLQVNAKQWNKSFINYVFDTGTAEQIYKTPLLPS- 172

Query: 211 NGHLKKDKLRWTLTKNGEFSVKSLYAKLMNPNYLVS-HASKRFWKGLWSMDTSQRIKFFI 387
              +++D   W   K+G +S++S Y  ++N N  ++ H     W  +W++    ++K F+
Sbjct: 173 ---VQQDIATWRFEKDGNYSIRSAYCDILNNNTALNQHRVNGSWNSIWNLKLPPKVKNFM 229

Query: 388 WKCLQDALPTKMKL 429
           W+  ++ LPT++KL
Sbjct: 230 WRACRNCLPTRVKL 243


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/141 (29%), Positives = 67/141 (47%)
 Frame = +1

Query: 7    N*TIIESRWLPTRTETLANSSHRSNTNITLVSGLINSDNKKWNL*LLQSTFDNGLV*EIV 186
            N  I E  W+         S    N N  +VS LI+ D  +W + L+++ F+   +  I+
Sbjct: 935  NVRIWEDPWVLDELGRFITSEKHGNLN--MVSELIDFDRMEWKVSLIETVFNERDIKCIL 992

Query: 187  NINLYTDRNGHLKKDKLRWTLTKNGEFSVKSLYAKLMNPNYLVSHASKRFWKGLWSMDTS 366
            +I L    +    KD+L W  TKN  +SVK+ Y      N    H +   W  +WSM+ S
Sbjct: 993  SIPL----SSLPLKDELTWAFTKNAHYSVKTAYMLGKGGNLDSFHQA---WIDIWSMEVS 1045

Query: 367  QRIKFFIWKCLQDALPTKMKL 429
             ++K F+W+   + LP +  L
Sbjct: 1046 PKVKHFLWRLGTNTLPVRSLL 1066


>gb|ABN07997.1| contains similarity to reverse trancriptase , related [Medicago
           truncatula]
          Length = 407

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 6/144 (4%)
 Frame = +1

Query: 16  IIESRWLPTRTETLANSSHRSNTNITLVSGLINSDNKKWNL*LLQSTFDNGLV*EIVNIN 195
           I E  W+PT       ++   N  +  V  LIN+    WN  +L+  F +  + +I +I 
Sbjct: 214 IWEDNWVPTYKGLKVMTTKGPNHFVNRVKDLINNQESLWNKVILEDQFISINIDQISHIP 273

Query: 196 LYTDRNGHLKKDKLRWTLTKNGEFSVKSLYAKLMN------PNYLVSHASKRFWKGLWSM 357
           L    N     D L W     G +SVKS Y  L         N   S      WK +WS+
Sbjct: 274 LVNTTN----PDSLMWMHNPTGIYSVKSGYNTLRTWQTQQINNTSTSSDETLIWKKIWSL 329

Query: 358 DTSQRIKFFIWKCLQDALPTKMKL 429
            T  R K  +W+ L D+LP +  L
Sbjct: 330 HTIPRHKVLLWRILNDSLPVRSSL 353


>ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497135|gb|AES78338.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 894

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
 Frame = +1

Query: 97  VSGLINSDNKKWNL*LLQSTF-DNGLV*EIVNINLYTDRNGHLKKDKLRWTLTKNGEFSV 273
           VS L+ +  K+WN+ L++  F DN     I N  L+      +  D   W   ++G +SV
Sbjct: 178 VSDLLVTPQKQWNMELIKLFFFDNATARNIFNTPLFPS----VAHDVPVWMFERDGAYSV 233

Query: 274 KSLYAKLMNPNY-LVSHASKRFWKGLWSMDTSQRIKFFIWKCLQDALPTKMKL 429
           KS Y  ++N +  +V H  +  W  +WS+    ++K F+W+  ++ LPT+++L
Sbjct: 234 KSAYKDILNHDVTVVHHRVEGNWNCIWSLKLPPKVKNFLWRACRNCLPTRIRL 286


>gb|EEE55133.1| hypothetical protein OsJ_02920 [Oryza sativa Japonica Group]
          Length = 1049

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/150 (22%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
 Frame = +1

Query: 16   IIESRWLPTRTETLANSSHRSNTNITLVSGLINSDNKKWNL*LLQSTFDNGLV*EIVNIN 195
            I + +W+P     + N+      ++T V  L+N +   W+  ++++ F++ +  E++ + 
Sbjct: 657  ITKDKWIPGVQAGMVNTRFPIPDDVT-VDWLMNPERNAWDEEIVKAVFNDDIAREVLQVP 715

Query: 196  LYTDRNGHLKKDKLRWTLTKNGEFSVKSLYAKLMNPNYLVSHASK------------RFW 339
            +    + H  +D + W   K G F+V+S Y  + +  ++V+ +S             +FW
Sbjct: 716  I----SRHGGEDFVSWPHDKRGLFTVRSAYNLVRSNLFVVAQSSNGRGQHSGANVDSQFW 771

Query: 340  KGLWSMDTSQRIKFFIWKCLQDALPTKMKL 429
            K LW+++   ++   +W+ + D LPT  +L
Sbjct: 772  KALWTINAPGKMLIHLWRSVHDCLPTGFQL 801