BLASTX nr result

ID: Papaver23_contig00003389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003389
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265472.1| PREDICTED: proteasomal ubiquitin receptor AD...   124   2e-26
ref|XP_002522941.1| adhesion regulating molecule, putative [Rici...   121   1e-25
ref|XP_003525320.1| PREDICTED: proteasomal ubiquitin receptor AD...   119   4e-25
ref|XP_002308128.1| predicted protein [Populus trichocarpa] gi|2...   118   1e-24
gb|AFK39491.1| unknown [Lotus japonicus]                              118   1e-24

>ref|XP_002265472.1| PREDICTED: proteasomal ubiquitin receptor ADRM1 [Vitis vinifera]
           gi|297736028|emb|CBI24066.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  124 bits (311), Expect = 2e-26
 Identities = 64/98 (65%), Positives = 78/98 (79%), Gaps = 3/98 (3%)
 Frame = +1

Query: 1   SHLPEGKLSPSDLIELLQCPQFRQQVESFTYVLRTGQIDLTQFGIDPAKYNFSVQSFLEA 180
           S+LPEG+ +P DL+ELLQ P FRQQV+SFTYVLRTGQIDL+QFGIDP+KY F+V SFLEA
Sbjct: 227 SYLPEGQWNPEDLLELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEA 286

Query: 181 LDDSVAKVSDSGETGSRQDENKDSTSQT---QNDPMDE 285
           L+D+V K S SG+      ++KDS SQT    N+PMDE
Sbjct: 287 LEDTVCKASQSGQ------DDKDSRSQTSCNDNEPMDE 318


>ref|XP_002522941.1| adhesion regulating molecule, putative [Ricinus communis]
           gi|223537835|gb|EEF39452.1| adhesion regulating
           molecule, putative [Ricinus communis]
          Length = 557

 Score =  121 bits (303), Expect = 1e-25
 Identities = 64/97 (65%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   SHLPEGKLSPSDLIELLQCPQFRQQVESFTYVLRTGQIDLTQFGIDPAKYNFSVQSFLEA 180
           S+LPEG+ +P D++ELLQ P FRQQ++SFTYVLRTGQIDL+QFGIDP+KY F+V SFLEA
Sbjct: 464 SYLPEGQWTPEDILELLQSPPFRQQMDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEA 523

Query: 181 LDDSVAKVSDSGETGSRQDENKDSTSQT--QNDPMDE 285
           L+DS + VS+     SRQ E+KD TSQ+  +NDPMDE
Sbjct: 524 LEDSASPVSEE----SRQ-EDKDLTSQSCDRNDPMDE 555


>ref|XP_003525320.1| PREDICTED: proteasomal ubiquitin receptor ADRM1-like [Glycine max]
          Length = 321

 Score =  119 bits (299), Expect = 4e-25
 Identities = 60/94 (63%), Positives = 76/94 (80%)
 Frame = +1

Query: 4   HLPEGKLSPSDLIELLQCPQFRQQVESFTYVLRTGQIDLTQFGIDPAKYNFSVQSFLEAL 183
           +LPEGK SP +++ELLQ P FRQQV+SFTYVLRTGQIDL+QFGIDP+KY F+V SFLEAL
Sbjct: 227 YLPEGKWSPEEILELLQSPPFRQQVDSFTYVLRTGQIDLSQFGIDPSKYKFTVLSFLEAL 286

Query: 184 DDSVAKVSDSGETGSRQDENKDSTSQTQNDPMDE 285
           +DSV+K  +S E   + D++  S S  ++DPMDE
Sbjct: 287 EDSVSKSVES-EEARQDDQDLRSQSCNRHDPMDE 319


>ref|XP_002308128.1| predicted protein [Populus trichocarpa] gi|222854104|gb|EEE91651.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  118 bits (296), Expect = 1e-24
 Identities = 60/97 (61%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
 Frame = +1

Query: 1   SHLPEGKLSPSDLIELLQCPQFRQQVESFTYVLRTGQIDLTQFGIDPAKYNFSVQSFLEA 180
           SHLPEG  +P D+++LLQ P FRQQV+SFTYVLRTGQIDL+QFG+DP+KY F+V SFLEA
Sbjct: 220 SHLPEGHWTPEDILDLLQSPPFRQQVDSFTYVLRTGQIDLSQFGVDPSKYKFTVLSFLEA 279

Query: 181 LDDSVAKVSDSGETGSRQDENKDSTSQTQN--DPMDE 285
           L+DSV+K+S+         E KD   Q+ N  DPMDE
Sbjct: 280 LEDSVSKMSEES-----TQEGKDLRPQSHNRDDPMDE 311


>gb|AFK39491.1| unknown [Lotus japonicus]
          Length = 318

 Score =  118 bits (295), Expect = 1e-24
 Identities = 62/94 (65%), Positives = 76/94 (80%)
 Frame = +1

Query: 4   HLPEGKLSPSDLIELLQCPQFRQQVESFTYVLRTGQIDLTQFGIDPAKYNFSVQSFLEAL 183
           +LPEGK SP D++ELLQ P FRQQV+SFTYVL+TGQIDL+QFGIDP+KY F+V SFLEAL
Sbjct: 226 YLPEGKWSPEDILELLQSPPFRQQVDSFTYVLKTGQIDLSQFGIDPSKYKFTVLSFLEAL 285

Query: 184 DDSVAKVSDSGETGSRQDENKDSTSQTQNDPMDE 285
           +DSV K  +  E  SRQD+ + S S  ++DPMDE
Sbjct: 286 EDSVLKSVEPEE--SRQDDLR-SQSCNRHDPMDE 316


Top