BLASTX nr result

ID: Papaver23_contig00003327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003327
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...    61   8e-08
ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cu...    61   8e-08
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...    61   8e-08
emb|CBI24846.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis v...    59   5e-07

>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   SSLLKAIEGVADLKTYLAARFSLKSGMKPHELVF 104
           S+LLK+IE V+DLKTYLAARFSLK+GMKPHELVF
Sbjct: 198 SALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   SSLLKAIEGVADLKTYLAARFSLKSGMKPHELVF 104
           S+LLK+IE V+DLKTYLAARFSLK+GMKPHELVF
Sbjct: 198 SALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   SSLLKAIEGVADLKTYLAARFSLKSGMKPHELVF 104
           S+LLK+IE V+DLKTYLAARFSLK+GMKPHELVF
Sbjct: 198 SALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231


>emb|CBI24846.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +3

Query: 9   LLKAIEGVADLKTYLAARFSLKSGMKPHELVF 104
           L+K+IEGV DLKTYL ARFSLK+GMKPHELVF
Sbjct: 175 LIKSIEGVPDLKTYLGARFSLKAGMKPHELVF 206


>ref|XP_002265394.1| PREDICTED: 60S ribosomal protein L6 [Vitis vinifera]
          Length = 233

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +3

Query: 9   LLKAIEGVADLKTYLAARFSLKSGMKPHELVF 104
           L+K+IEGV DLKTYL ARFSLK+GMKPHELVF
Sbjct: 202 LIKSIEGVPDLKTYLGARFSLKAGMKPHELVF 233


Top