BLASTX nr result

ID: Papaver23_contig00003319 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003319
         (1503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Viti...   357   5e-96
ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata sub...   346   8e-93
ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thalia...   346   8e-93
ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|2...   344   3e-92
ref|XP_002307489.1| f-box family protein [Populus trichocarpa] g...   333   9e-89

>ref|XP_002266510.1| PREDICTED: SKP1-interacting partner 15 [Vitis vinifera]
          Length = 374

 Score =  357 bits (916), Expect = 5e-96
 Identities = 178/269 (66%), Positives = 212/269 (78%), Gaps = 4/269 (1%)
 Frame = -2

Query: 1307 IHHLPQDSLHQIFSSLSIREILICRSLSKFFNQILTSPSFINLLSLKPPLNLIALRPSXX 1128
            I+ LPQD+LH IFS+L +R+I+ICRS+ KFF Q LT+P+F+ L+S +PPLNLIALRP   
Sbjct: 6    IYRLPQDTLHYIFSTLPLRQIIICRSVCKFFYQTLTAPAFMELISTQPPLNLIALRPPHH 65

Query: 1127 XXXXXXHRIVVS-SPHSYLHVYDSDLNQWMKFAFDFIPFRSPIPVASSGGIVYLWVDSP- 954
                  H      S H+ LHV+D   NQW++F   F+PFRSP PVASS G+VYLW DS  
Sbjct: 66   HHHHHHHHHNRDVSSHNALHVFDPSSNQWVRFPLSFLPFRSPTPVASSLGLVYLWADSLN 125

Query: 953  --DSGKSLVLCNPLTRRFQVLPALGSAWSRHGTVLVGPVNRVLVLTELACLYFNGVGESW 780
              +S KSL++CNPLTR FQVLP LGSAWSRHG+VLVG  NRVLVLTELA LYF+G  + W
Sbjct: 126  SLESNKSLIVCNPLTRSFQVLPQLGSAWSRHGSVLVGSPNRVLVLTELATLYFSG-SDQW 184

Query: 779  QKFSSNLVSKPRSPILVFDSLFALCDVGSPWRSQWKLFSCTLTELEKSQGWKRLEKHEWG 600
             KFSSNL SKPRSPILV DS+ ALCDVGSPWRSQWKLF+CTL  L+KSQ W RL++HEWG
Sbjct: 185  LKFSSNLPSKPRSPILVSDSVLALCDVGSPWRSQWKLFACTLNHLQKSQPWTRLDRHEWG 244

Query: 599  DIFDILKRPRLIRGNGRRILMVGGLKSSF 513
            D+FDIL+RPRL++G G +ILMVGGLKSSF
Sbjct: 245  DVFDILRRPRLVKGLGNQILMVGGLKSSF 273



 Score = 88.6 bits (218), Expect = 4e-15
 Identities = 34/52 (65%), Positives = 45/52 (86%)
 Frame = -1

Query: 360 VCFSGKRIGRLAMWNYSIKAGKGEWRWVDGIHGNGDGLYRGFEYDARFTSLP 205
           VCFS KR+GRLA+W+YS + GKG+WRW++G+ GNGDGL+RGF + AR T+LP
Sbjct: 323 VCFSAKRVGRLALWDYSTETGKGDWRWINGVPGNGDGLFRGFVFQARLTALP 374


>ref|XP_002887662.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333503|gb|EFH63921.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 374

 Score =  346 bits (888), Expect = 8e-93
 Identities = 175/273 (64%), Positives = 209/273 (76%), Gaps = 8/273 (2%)
 Frame = -2

Query: 1307 IHHLPQDSLHQIFSSLSIREILICRSLSKFFNQILTSPSFINLLSLKPPLNLIALRPSXX 1128
            I+ LP DSLHQIFSSL +R+I++CRS+ KFFNQ+LTS  FI ++S +PPLNL+ALRP   
Sbjct: 6    INRLPPDSLHQIFSSLPLRDIMVCRSVCKFFNQLLTSQCFIEIISTRPPLNLLALRPPHH 65

Query: 1127 XXXXXXH-RIVVSSPHSYLHVYDSDLNQWMKFAFDFIPFRSPIPVASSGGIVYLWVDSPD 951
                        ++   Y+HVYD + NQW +F  DF+PFRSP PVASS G++YLW DS D
Sbjct: 66   HHSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYLWGDSID 125

Query: 950  ---SGKSLVLCNPLTRRFQVLPALGSAWSRHGTVLVGPVNRVLVLTELACLYFNG--VGE 786
               S KSLV CNPLTR+F+VLP LGSAWSRHGTVLV  VNRV+VLTELA LY++G  V  
Sbjct: 126  LAESSKSLVACNPLTRQFKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGTVVAN 185

Query: 785  SWQKFSSNLVSKPRSPILVFDSLFALCDVGSPWRSQWKLFSCTLTELEKSQ-GWKRLEKH 609
             W KFSSNL SKPRSP+L+  S+FALCDVGSPWRSQWKLFSC LT L  +   W  LEKH
Sbjct: 186  QWFKFSSNLPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKH 245

Query: 608  EWGDIFDILKRPRLIRGNG-RRILMVGGLKSSF 513
            EWGDIFDI+KRPRL+RGNG  ++LM+GGLKS+F
Sbjct: 246  EWGDIFDIIKRPRLLRGNGDSKLLMIGGLKSTF 278



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = -1

Query: 360 VCFSGKRIGRLAMWNYSIKAGKGEWRWVDGIHGNGDGLYRGFEYDARFTSLP 205
           V FS KR+G+LAMW+      +G WRW+DG+ G  DGL RGF +DA+ T +P
Sbjct: 328 VYFSAKRMGKLAMWD----CWEG-WRWIDGVPGYADGLCRGFVFDAKLTMMP 374


>ref|NP_565142.1| SKP1-interacting partner 15 [Arabidopsis thaliana]
            gi|75098682|sp|O49279.1|SKI15_ARATH RecName:
            Full=SKP1-interacting partner 15; AltName: Full=F-box
            only protein 3 gi|2829924|gb|AAC00632.1| Unknown protein
            [Arabidopsis thaliana] gi|17473630|gb|AAL38278.1| unknown
            protein [Arabidopsis thaliana] gi|21553606|gb|AAM62699.1|
            F-box protein AtFBX3 [Arabidopsis thaliana]
            gi|30725584|gb|AAP37814.1| At1g76920 [Arabidopsis
            thaliana] gi|332197782|gb|AEE35903.1| SKP1-interacting
            partner 15 [Arabidopsis thaliana]
          Length = 374

 Score =  346 bits (888), Expect = 8e-93
 Identities = 176/273 (64%), Positives = 209/273 (76%), Gaps = 8/273 (2%)
 Frame = -2

Query: 1307 IHHLPQDSLHQIFSSLSIREILICRSLSKFFNQILTSPSFINLLSLKPPLNLIALRPSXX 1128
            ++ LP DSLHQIFSSL IR+I+ICRS+ KFFNQ+LTS  FI ++S +PPLNL+ALRP   
Sbjct: 6    VNCLPPDSLHQIFSSLPIRDIMICRSVCKFFNQLLTSQCFIEIISTRPPLNLLALRPPHH 65

Query: 1127 XXXXXXH-RIVVSSPHSYLHVYDSDLNQWMKFAFDFIPFRSPIPVASSGGIVYLWVDSPD 951
                        ++   Y+HVYD + NQW +F  DF+PFRSP PVASS G++YLW DS D
Sbjct: 66   HHSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSPQPVASSSGLIYLWGDSID 125

Query: 950  ---SGKSLVLCNPLTRRFQVLPALGSAWSRHGTVLVGPVNRVLVLTELACLYFNG--VGE 786
               S KSLV CNPLTR+F+VLP LGSAWSRHGTVLV  VNRV+VLTELA LY++G  V  
Sbjct: 126  LAESSKSLVACNPLTRQFKVLPQLGSAWSRHGTVLVDSVNRVMVLTELAALYYSGTVVAN 185

Query: 785  SWQKFSSNLVSKPRSPILVFDSLFALCDVGSPWRSQWKLFSCTLTELEKSQ-GWKRLEKH 609
             W KFSSNL SKPRSP+L+  S+FALCDVGSPWRSQWKLFSC LT L  +   W  LEKH
Sbjct: 186  QWLKFSSNLPSKPRSPVLMSSSVFALCDVGSPWRSQWKLFSCKLTNLTITHTNWVCLEKH 245

Query: 608  EWGDIFDILKRPRLIRGNG-RRILMVGGLKSSF 513
            EWGDIFDI+KRPRL+RGNG  ++LM+GGLKS+F
Sbjct: 246  EWGDIFDIIKRPRLLRGNGDSKLLMIGGLKSTF 278


>ref|XP_002300927.1| predicted protein [Populus trichocarpa] gi|222842653|gb|EEE80200.1|
            predicted protein [Populus trichocarpa]
          Length = 376

 Score =  344 bits (883), Expect = 3e-92
 Identities = 172/275 (62%), Positives = 215/275 (78%), Gaps = 10/275 (3%)
 Frame = -2

Query: 1307 IHHLPQDSLHQIFSSLSIREILICRSLSKFFNQILTSPSFINLLSLKPPLNLIALRPSXX 1128
            I+ LPQD+LHQIFSSL +R+I+ICRS+ KFFNQ+LTSPSF++L+S +PPL  +ALRP   
Sbjct: 6    INRLPQDTLHQIFSSLPLRQIMICRSVCKFFNQMLTSPSFVDLISTQPPLRFLALRPPHH 65

Query: 1127 XXXXXXHR---IVVSSPHSYLHVYDSDLNQWMKFAFDFIPFRSPIPVASSGGIVYLWVDS 957
                   R    V S P  YLHV+D D NQW++F+  F+PFRSP PVAS+ G++YLW +S
Sbjct: 66   HHHLHHQRQNSHVSSVP--YLHVFDPDQNQWLRFSLSFLPFRSPHPVASASGLIYLWGES 123

Query: 956  P---DSGKSLVLCNPLTRRFQVLPALGSAWSRHGTVLVGPVN-RVLVLTELACLYFNGVG 789
            P   +S +SLV+CNPLTR+FQVLP LGSAWSRHG+VLV  VN RV+VLTELA LYF+   
Sbjct: 124  PTSIESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFSNTN 183

Query: 788  E--SWQKFSSNLVSKPRSPILVFDSLFALCDVGSPWRSQWKLFSCTLTELEKS-QGWKRL 618
            +  SW  FS+NL SKPRSPIL+ DS+FALCDVGSPWRSQWKLF+C L++L  +   W  L
Sbjct: 184  KTNSWLTFSANLPSKPRSPILISDSVFALCDVGSPWRSQWKLFTCILSKLNNNYNNWVCL 243

Query: 617  EKHEWGDIFDILKRPRLIRGNGRRILMVGGLKSSF 513
            E+ EWGDIFDI+KRPRL+RG G ++LM+GGLKS+F
Sbjct: 244  ERQEWGDIFDIIKRPRLVRGKGNKLLMIGGLKSNF 278


>ref|XP_002307489.1| f-box family protein [Populus trichocarpa]
            gi|222856938|gb|EEE94485.1| f-box family protein [Populus
            trichocarpa]
          Length = 374

 Score =  333 bits (853), Expect = 9e-89
 Identities = 170/272 (62%), Positives = 211/272 (77%), Gaps = 7/272 (2%)
 Frame = -2

Query: 1307 IHHLPQDSLHQIFSSLSIREILICRSLSKFFNQILTSPSFINLLSLKPPLNLIALRPSXX 1128
            I+ LPQD+L+QIFSSL +R+I+ICRS+ KFFNQ+LTSPSF++L+S + PL  +ALRP   
Sbjct: 6    INRLPQDTLNQIFSSLPLRQIMICRSVCKFFNQMLTSPSFMDLISTQTPLRFLALRPPHH 65

Query: 1127 XXXXXXHRIVVSSPHSYLHVYDSDLNQWMKFAFDFIPFRSPIPVASSGGIVYLWVDSP-- 954
                  H   VSS   YLHV+D D NQW++F+  F+PFRSP PVAS+ G++YLW +SP  
Sbjct: 66   HHHHQRHNSHVSSL-PYLHVFDPDQNQWLRFSLSFLPFRSPQPVASASGLLYLWGESPNS 124

Query: 953  -DSGKSLVLCNPLTRRFQVLPALGSAWSRHGTVLVGPVN-RVLVLTELACLYFNGVGE-- 786
             +S +SLV+CNPLTR+FQVLP LGSAWSRHG+VLV  VN RV+VLTELA LYF+   +  
Sbjct: 125  LESNRSLVVCNPLTRQFQVLPQLGSAWSRHGSVLVDSVNHRVMVLTELAALYFSNTNKTN 184

Query: 785  SWQKFSSNLVSKPRSPILVFDSLFALCDVGSPWRSQWKLFSCTLTELEKS-QGWKRLEKH 609
            SW  FS+NL SKPRSPIL+ DS+FALCDVGS WRSQWKLF+CTLT L  S   W  L + 
Sbjct: 185  SWLTFSANLPSKPRSPILISDSVFALCDVGSRWRSQWKLFTCTLTNLNNSYNNWVCLGRL 244

Query: 608  EWGDIFDILKRPRLIRGNGRRILMVGGLKSSF 513
            EWGDIFDI+KRPRL+RG G ++LM+G LKS+F
Sbjct: 245  EWGDIFDIIKRPRLVRGKGNKLLMIGVLKSNF 276


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