BLASTX nr result

ID: Papaver23_contig00003309 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003309
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatul...   189   4e-46
ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatul...   189   4e-46
gb|ACJ83904.1| unknown [Medicago truncatula] gi|388507820|gb|AFK...   189   4e-46
ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatul...   189   4e-46
ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [...   188   7e-46

>ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|355504208|gb|AES85411.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 239

 Score =  189 bits (479), Expect = 4e-46
 Identities = 89/110 (80%), Positives = 100/110 (90%)
 Frame = +3

Query: 3   VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 182
           VMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQGVLGIK
Sbjct: 126 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 185

Query: 183 VKIMLDWDPKGKNGPMTPLPDVVTIHQPKDEEDFVRPSMMAPTEIDMAVP 332
           VKIMLDWDPKGK GP TPLPD+VTIH PK+EE+++RP+ +   +I++ VP
Sbjct: 186 VKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVP 235


>ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|355478377|gb|AES59580.1| 40S ribosomal protein S3
           [Medicago truncatula]
          Length = 239

 Score =  189 bits (479), Expect = 4e-46
 Identities = 89/110 (80%), Positives = 100/110 (90%)
 Frame = +3

Query: 3   VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 182
           VMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQGVLGIK
Sbjct: 126 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 185

Query: 183 VKIMLDWDPKGKNGPMTPLPDVVTIHQPKDEEDFVRPSMMAPTEIDMAVP 332
           VKIMLDWDPKGK GP TPLPD+VTIH PK+EE+++RP+ +   +I++ VP
Sbjct: 186 VKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVP 235


>gb|ACJ83904.1| unknown [Medicago truncatula] gi|388507820|gb|AFK41976.1| unknown
           [Medicago truncatula]
          Length = 239

 Score =  189 bits (479), Expect = 4e-46
 Identities = 89/110 (80%), Positives = 100/110 (90%)
 Frame = +3

Query: 3   VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 182
           VMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQGVLGIK
Sbjct: 126 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 185

Query: 183 VKIMLDWDPKGKNGPMTPLPDVVTIHQPKDEEDFVRPSMMAPTEIDMAVP 332
           VKIMLDWDPKGK GP TPLPD+VTIH PK+EE+++RP+ +   +I++ VP
Sbjct: 186 VKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVP 235


>ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
           gi|217071466|gb|ACJ84093.1| unknown [Medicago
           truncatula] gi|355479171|gb|AES60374.1| 40S ribosomal
           protein S3 [Medicago truncatula]
           gi|388518095|gb|AFK47109.1| unknown [Medicago
           truncatula]
          Length = 239

 Score =  189 bits (479), Expect = 4e-46
 Identities = 89/110 (80%), Positives = 100/110 (90%)
 Frame = +3

Query: 3   VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 182
           VMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSGQPV +YIDSAVRHVLLRQGVLGIK
Sbjct: 126 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIK 185

Query: 183 VKIMLDWDPKGKNGPMTPLPDVVTIHQPKDEEDFVRPSMMAPTEIDMAVP 332
           VKIMLDWDPKGK GP TPLPD+VTIH PK+EE+++RP+ +   +I++ VP
Sbjct: 186 VKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVP 235


>ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
           gi|449521735|ref|XP_004167885.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Cucumis sativus]
          Length = 236

 Score =  188 bits (477), Expect = 7e-46
 Identities = 91/103 (88%), Positives = 95/103 (92%)
 Frame = +3

Query: 3   VMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 182
           VMESGAKGCEVIVSGKLRA RAKSMKFKDGYMISSGQPV EYIDSAVRHVLLRQGVLGIK
Sbjct: 126 VMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIK 185

Query: 183 VKIMLDWDPKGKNGPMTPLPDVVTIHQPKDEEDFVRPSMMAPT 311
           VKIMLDWDPKGK GP TPLPD+VTIH PK+EEDF+RP  + PT
Sbjct: 186 VKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPT 228


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