BLASTX nr result

ID: Papaver23_contig00003289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003289
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512958.1| RNA-binding protein, putative [Ricinus commu...   256   2e-66
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              255   5e-66
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   255   5e-66
ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|2...   251   7e-65
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...   248   5e-64

>ref|XP_002512958.1| RNA-binding protein, putative [Ricinus communis]
            gi|223547969|gb|EEF49461.1| RNA-binding protein, putative
            [Ricinus communis]
          Length = 916

 Score =  256 bits (654), Expect = 2e-66
 Identities = 129/202 (63%), Positives = 156/202 (77%)
 Frame = +3

Query: 3    LHKVTRRPTGTGFLKFSTPXXXXXXXXXXXTTGDSEILLKGRQLTVFKAQHKKSAHDSKL 182
            LH+VT+RP GTGFLKF T                  ILLKGRQLTV KA  K SAH+ ++
Sbjct: 476  LHQVTKRPRGTGFLKFKTEDAAIAAVSAANLASGLGILLKGRQLTVLKALDKNSAHNKEM 535

Query: 183  DKAKSEHVDQRNLYLAKEGIILEGSPAAEDVSSYDMSKRHVLEKTKNIKLQSPNFHVSRT 362
            +KAK+E  D RNLYLAKEG+ILEG+PA+E VS+ DM KR  L + K  KL+SPNFHVSR 
Sbjct: 536  EKAKNEDNDHRNLYLAKEGVILEGTPASEGVSASDMDKRKALHEKKMTKLRSPNFHVSRN 595

Query: 363  RLIVYNLPNAISQKQLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAKATKNYSRRVAFI 542
            RL+VYNLP+++++K+LKK+ +DAV+SRA+KQ PVI+QIKFL  TK  K TKN+SR VAFI
Sbjct: 596  RLVVYNLPHSVTEKKLKKLCIDAVISRATKQKPVIRQIKFLQSTKTGKVTKNHSRGVAFI 655

Query: 543  QFTEHQHALVALRVLNNNPETF 608
            +FTEHQHALVALRVLNNNPETF
Sbjct: 656  EFTEHQHALVALRVLNNNPETF 677


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  255 bits (651), Expect = 5e-66
 Identities = 130/203 (64%), Positives = 158/203 (77%), Gaps = 1/203 (0%)
 Frame = +3

Query: 3    LHKVTRRPTGTGFLKFSTPXXXXXXXXXXXTTGDSEILLKGRQLTVFKAQHKKSAHDSKL 182
            LH+VT+RP GTGFLKF+T             T    I LKGRQLT  KA  KKSAHD +L
Sbjct: 525  LHQVTKRPKGTGFLKFNTVAAADAAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKEL 584

Query: 183  DKAKSEHVDQRNLYLAKEGIILEGSPAAEDVSSYDMSKRHVLEKTKNIKLQSPNFHVSRT 362
             K+K E  D RNLYLAKEG+I+EG+PAAE VS+ DMSKRH+L + K+ KL+SPNFHVSRT
Sbjct: 585  KKSKPEERDHRNLYLAKEGLIVEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRT 644

Query: 363  RLIVYNLPNAISQKQLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAF 539
            RLI+YNLP ++++K++KK+ +DAV SRA+KQ P+I+QIKFL + K  K  TKN+SR VAF
Sbjct: 645  RLIIYNLPKSMTEKEVKKLCIDAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAF 704

Query: 540  IQFTEHQHALVALRVLNNNPETF 608
            I+FTEHQHALVALRVLNNNPETF
Sbjct: 705  IEFTEHQHALVALRVLNNNPETF 727


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  255 bits (651), Expect = 5e-66
 Identities = 130/203 (64%), Positives = 158/203 (77%), Gaps = 1/203 (0%)
 Frame = +3

Query: 3    LHKVTRRPTGTGFLKFSTPXXXXXXXXXXXTTGDSEILLKGRQLTVFKAQHKKSAHDSKL 182
            LH+VT+RP GTGFLKF+T             T    I LKGRQLT  KA  KKSAHD +L
Sbjct: 544  LHQVTKRPKGTGFLKFNTVAAADAAVSAANPTSSLGIFLKGRQLTALKALDKKSAHDKEL 603

Query: 183  DKAKSEHVDQRNLYLAKEGIILEGSPAAEDVSSYDMSKRHVLEKTKNIKLQSPNFHVSRT 362
             K+K E  D RNLYLAKEG+I+EG+PAAE VS+ DMSKRH+L + K+ KL+SPNFHVSRT
Sbjct: 604  KKSKPEERDHRNLYLAKEGLIVEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRT 663

Query: 363  RLIVYNLPNAISQKQLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAF 539
            RLI+YNLP ++++K++KK+ +DAV SRA+KQ P+I+QIKFL + K  K  TKN+SR VAF
Sbjct: 664  RLIIYNLPKSMTEKEVKKLCIDAVTSRATKQKPMIKQIKFLKDMKKGKVVTKNHSRGVAF 723

Query: 540  IQFTEHQHALVALRVLNNNPETF 608
            I+FTEHQHALVALRVLNNNPETF
Sbjct: 724  IEFTEHQHALVALRVLNNNPETF 746


>ref|XP_002313773.1| predicted protein [Populus trichocarpa] gi|222850181|gb|EEE87728.1|
            predicted protein [Populus trichocarpa]
          Length = 974

 Score =  251 bits (641), Expect = 7e-65
 Identities = 130/203 (64%), Positives = 155/203 (76%), Gaps = 1/203 (0%)
 Frame = +3

Query: 3    LHKVTRRPTGTGFLKFSTPXXXXXXXXXXXTTGDSEILLKGRQLTVFKAQHKKSAHDSKL 182
            LH+VT+RP GTGFLKF T                  I LKGRQLTVFKA  KKSAHD + 
Sbjct: 539  LHQVTKRPRGTGFLKFKTADGATAAVSAANVASGLGIFLKGRQLTVFKALDKKSAHDKEK 598

Query: 183  DKAKSEHVDQRNLYLAKEGIILEGSPAAEDVSSYDMSKRHVLEKTKNIKLQSPNFHVSRT 362
            +K K E  D RNLYLAKEG+ILEG+PAAE VS  DM+KR+ L++ K  KL+SPNFHVSRT
Sbjct: 599  EKTKIEDRDHRNLYLAKEGLILEGTPAAEGVSISDMAKRNRLQEEKMTKLRSPNFHVSRT 658

Query: 363  RLIVYNLPNAISQKQLKKIFVDAVLSRASKQTPVIQQIKFLNETKAAK-ATKNYSRRVAF 539
            RL+VYNLP ++++KQLKK+F+DAV SRA+KQ PVI+Q+KFL   K  K  TK++SR VAF
Sbjct: 659  RLVVYNLPKSMTEKQLKKLFIDAVTSRATKQKPVIRQMKFLKNVKKGKVVTKDHSRGVAF 718

Query: 540  IQFTEHQHALVALRVLNNNPETF 608
            ++FTEHQHALVALRVLNNNPETF
Sbjct: 719  VEFTEHQHALVALRVLNNNPETF 741


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score =  248 bits (634), Expect = 5e-64
 Identities = 131/203 (64%), Positives = 154/203 (75%), Gaps = 1/203 (0%)
 Frame = +3

Query: 3    LHKVTRRPTGTGFLKFSTPXXXXXXXXXXXTTGDSEILLKGRQLTVFKAQHKKSAHDSKL 182
            LH+VT+RP GTGFLKF T                  ILLKGR L V KA  KKSAHD +L
Sbjct: 530  LHQVTKRPRGTGFLKFKTVEAANTAISTASAASGMGILLKGRPLKVLKALDKKSAHDKEL 589

Query: 183  DKAKSEHVDQRNLYLAKEGIILEGSPAAEDVSSYDMSKRHVLEKTKNIKLQSPNFHVSRT 362
            +KAK+E  D RNLYLAKEG+ILEG+ AAE VS+ DM KR  LEK K  KLQSPNFHVSRT
Sbjct: 590  EKAKNEVHDHRNLYLAKEGLILEGTTAAEGVSASDMLKRQELEKKKKTKLQSPNFHVSRT 649

Query: 363  RLIVYNLPNAISQKQLKKIFVDAVLSRASKQTPVIQQIKFL-NETKAAKATKNYSRRVAF 539
            RLI+YNLP ++++K+LKK+ +DAV+SRA+KQ PVI+QIKFL NE K   A + YSR VAF
Sbjct: 650  RLIIYNLPKSMNEKELKKLCIDAVISRATKQKPVIRQIKFLKNEKKGNVAQERYSRGVAF 709

Query: 540  IQFTEHQHALVALRVLNNNPETF 608
            ++F+EHQHALVALRVLNNNPETF
Sbjct: 710  VEFSEHQHALVALRVLNNNPETF 732


Top