BLASTX nr result

ID: Papaver23_contig00003201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003201
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537629.1| PREDICTED: 60S ribosomal protein L8-3-like [...    50   1e-06
gb|ACU24202.1| unknown [Glycine max]                                   50   1e-06
ref|XP_003547944.1| PREDICTED: 60S ribosomal protein L8-3-like [...    50   1e-06
gb|ACU19917.1| unknown [Glycine max]                                   50   1e-06
ref|NP_001236274.1| ribosomal protein L2 [Glycine max] gi|120545...    50   1e-06

>ref|XP_003537629.1| PREDICTED: 60S ribosomal protein L8-3-like [Glycine max]
          Length = 261

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 30/63 (47%), Positives = 33/63 (52%), Gaps = 15/63 (23%)
 Frame = +1

Query: 1099 SWSYKIVPSRCRVMSVQVA---------------YDKCRVKRSC*PKFGNIIVNPVELPH 1233
            S S KIVPS CR M  QVA               Y K RVKR+C PK   + +NPVE PH
Sbjct: 152  SGSKKIVPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPH 211

Query: 1234 RGG 1242
             GG
Sbjct: 212  GGG 214



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2

Query: 1244 NNQQIRHAMNVLRDAPPGQ 1300
            N+Q I HA  V RDAPPGQ
Sbjct: 215  NHQHIGHASTVRRDAPPGQ 233


>gb|ACU24202.1| unknown [Glycine max]
          Length = 261

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 30/63 (47%), Positives = 33/63 (52%), Gaps = 15/63 (23%)
 Frame = +1

Query: 1099 SWSYKIVPSRCRVMSVQVA---------------YDKCRVKRSC*PKFGNIIVNPVELPH 1233
            S S KIVPS CR M  QVA               Y K RVKR+C PK   + +NPVE PH
Sbjct: 152  SGSKKIVPSGCRAMIGQVAGGGRTEKPFLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPH 211

Query: 1234 RGG 1242
             GG
Sbjct: 212  GGG 214



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2

Query: 1244 NNQQIRHAMNVLRDAPPGQ 1300
            N+Q I HA  V RDAPPGQ
Sbjct: 215  NHQHIGHASTVRRDAPPGQ 233


>ref|XP_003547944.1| PREDICTED: 60S ribosomal protein L8-3-like [Glycine max]
          Length = 260

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 30/63 (47%), Positives = 33/63 (52%), Gaps = 15/63 (23%)
 Frame = +1

Query: 1099 SWSYKIVPSRCRVMSVQVA---------------YDKCRVKRSC*PKFGNIIVNPVELPH 1233
            S S KIVPS CR M  QVA               Y K RVKR+C PK   + +NPVE PH
Sbjct: 152  SGSKKIVPSDCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPH 211

Query: 1234 RGG 1242
             GG
Sbjct: 212  GGG 214



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2

Query: 1244 NNQQIRHAMNVLRDAPPGQ 1300
            N+Q I HA  V RDAPPGQ
Sbjct: 215  NHQHIGHASTVRRDAPPGQ 233


>gb|ACU19917.1| unknown [Glycine max]
          Length = 260

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 30/63 (47%), Positives = 33/63 (52%), Gaps = 15/63 (23%)
 Frame = +1

Query: 1099 SWSYKIVPSRCRVMSVQVA---------------YDKCRVKRSC*PKFGNIIVNPVELPH 1233
            S S KIVPS CR M  QVA               Y K RVKR+C PK   + +NPVE PH
Sbjct: 152  SGSKKIVPSDCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPH 211

Query: 1234 RGG 1242
             GG
Sbjct: 212  GGG 214



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2

Query: 1244 NNQQIRHAMNVLRDAPPGQ 1300
            N+Q I HA  V RDAPPGQ
Sbjct: 215  NHQHIGHASTVRRDAPPGQ 233


>ref|NP_001236274.1| ribosomal protein L2 [Glycine max] gi|12054507|emb|CAC20221.1|
            ribosomal protein L2 [Glycine max]
          Length = 260

 Score = 49.7 bits (117), Expect(2) = 1e-06
 Identities = 30/63 (47%), Positives = 33/63 (52%), Gaps = 15/63 (23%)
 Frame = +1

Query: 1099 SWSYKIVPSRCRVMSVQVA---------------YDKCRVKRSC*PKFGNIIVNPVELPH 1233
            S S KIVPS CR M  QVA               Y K RVKR+C PK   + +NPVE PH
Sbjct: 152  SGSKKIVPSDCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPH 211

Query: 1234 RGG 1242
             GG
Sbjct: 212  GGG 214



 Score = 30.4 bits (67), Expect(2) = 1e-06
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2

Query: 1244 NNQQIRHAMNVLRDAPPGQ 1300
            N+Q I HA  V RDAPPGQ
Sbjct: 215  NHQHIGHASTVSRDAPPGQ 233


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