BLASTX nr result

ID: Papaver23_contig00003184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003184
         (880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264233.2| PREDICTED: photosystem I reaction center sub...   213   5e-53
emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]   211   2e-52
gb|AFS88925.1| chloroplast photosystem I reaction center subunit...   206   6e-51
gb|AFW90564.1| photosystem I reaction center V (chloroplast) [So...   205   1e-50
gb|AFS88924.1| chloroplast photosystem I reaction center subunit...   204   2e-50

>ref|XP_002264233.2| PREDICTED: photosystem I reaction center subunit V, chloroplastic
           [Vitis vinifera] gi|296090036|emb|CBI39855.3| unnamed
           protein product [Vitis vinifera]
          Length = 194

 Score =  213 bits (542), Expect = 5e-53
 Identities = 117/163 (71%), Positives = 125/163 (76%), Gaps = 9/163 (5%)
 Frame = -2

Query: 747 ASALFSTPA------TIQK--TPQSFQGLRPF-KPTDSFXXXXXXXXXXXXXXKPASRVG 595
           +SA FS P       T+QK    QSFQGLRP  KPTD                 P    G
Sbjct: 36  SSAFFSAPTFSSAATTLQKHLPHQSFQGLRPLSKPTD----LSLTIPRMSTRPIPKRSAG 91

Query: 594 VIKSELSPSLVISLSTGLSLFLGRFVFFNFQRENSAKQVPEQNGMTHFEAGDSRAKEYVS 415
           V+++EL+ SLVISLSTGLSLFLGRFVFFNFQREN AKQVP+QNG+THFEAGDSRAKEYVS
Sbjct: 92  VVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSRAKEYVS 151

Query: 414 LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 286
           LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG
Sbjct: 152 LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 194


>emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera]
          Length = 161

 Score =  211 bits (536), Expect = 2e-52
 Identities = 116/163 (71%), Positives = 124/163 (76%), Gaps = 9/163 (5%)
 Frame = -2

Query: 747 ASALFSTPA------TIQK--TPQSFQGLRPF-KPTDSFXXXXXXXXXXXXXXKPASRVG 595
           +SA FS P       T+QK    Q FQGLRP  KPTD                 P    G
Sbjct: 3   SSAFFSAPTFSSAATTLQKHLPHQYFQGLRPLSKPTD----LSLTIPRMSTRPIPKRSAG 58

Query: 594 VIKSELSPSLVISLSTGLSLFLGRFVFFNFQRENSAKQVPEQNGMTHFEAGDSRAKEYVS 415
           V+++EL+ SLVISLSTGLSLFLGRFVFFNFQREN AKQVP+QNG+THFEAGDSRAKEYVS
Sbjct: 59  VVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGDSRAKEYVS 118

Query: 414 LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 286
           LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG
Sbjct: 119 LLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 161


>gb|AFS88925.1| chloroplast photosystem I reaction center subunit V-2 [Musa AB
           Group] gi|421958217|gb|AFX72947.1| photosystem I
           reaction center subunit V-2 [Musa AB Group]
          Length = 160

 Score =  206 bits (524), Expect = 6e-51
 Identities = 114/161 (70%), Positives = 126/161 (78%), Gaps = 8/161 (4%)
 Frame = -2

Query: 744 SALFSTP----ATIQKTPQSFQGLRPFKPTDSFXXXXXXXXXXXXXXKPASRV---GVIK 586
           S+LF+ P    + +  +  SF+GLRP KPTDS               KP  RV   G I+
Sbjct: 4   SSLFTYPMQKGSILTPSSTSFRGLRPLKPTDS----SQFPQTRAISIKPVRRVRKPGGIR 59

Query: 585 SELSPSLVISLSTGLSLFLGRFVFFNFQRENSAKQ-VPEQNGMTHFEAGDSRAKEYVSLL 409
           +EL+PSLVISLSTGLSLFLGRFVFFNFQREN AKQ +PEQNG+THFEAGD+RAKEYV LL
Sbjct: 60  AELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVGLL 119

Query: 408 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 286
           KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG
Sbjct: 120 KSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 160


>gb|AFW90564.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum]
          Length = 146

 Score =  205 bits (521), Expect = 1e-50
 Identities = 111/156 (71%), Positives = 120/156 (76%), Gaps = 1/156 (0%)
 Frame = -2

Query: 750 MASALFSTPATIQKTPQSFQGLRPF-KPTDSFXXXXXXXXXXXXXXKPASRVGVIKSELS 574
           MASALFS P        +FQGLRP  KPTDS                  +R   +K+EL+
Sbjct: 1   MASALFSAP--------TFQGLRPLNKPTDS--SLFLNKPIAFKPITKKTRNLAVKAELN 50

Query: 573 PSLVISLSTGLSLFLGRFVFFNFQRENSAKQVPEQNGMTHFEAGDSRAKEYVSLLKSNDP 394
           PS+VISLSTGLSLFLGRFVFFNFQREN AKQVP QNG++HFEAGD RAKEY+SLLKSNDP
Sbjct: 51  PSIVISLSTGLSLFLGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDP 110

Query: 393 VGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFFG 286
           VGFNIVDVLAWGSIGHIVAYYILATSSNGYDP FFG
Sbjct: 111 VGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG 146


>gb|AFS88924.1| chloroplast photosystem I reaction center subunit V-1 [Musa AB
           Group] gi|421958219|gb|AFX72948.1| photosystem I
           reaction center subunit V-1 [Musa AB Group]
          Length = 150

 Score =  204 bits (519), Expect = 2e-50
 Identities = 110/142 (77%), Positives = 117/142 (82%), Gaps = 4/142 (2%)
 Frame = -2

Query: 699 SFQGLRPFKPTDSFXXXXXXXXXXXXXXKPASRV---GVIKSELSPSLVISLSTGLSLFL 529
           SF+GLRP KPTDS               KP  RV   G I++EL+PSLVISLSTGLSLFL
Sbjct: 13  SFRGLRPLKPTDS----SQFPQTRAISIKPVRRVRKPGGIRAELNPSLVISLSTGLSLFL 68

Query: 528 GRFVFFNFQRENSAKQ-VPEQNGMTHFEAGDSRAKEYVSLLKSNDPVGFNIVDVLAWGSI 352
           GRFVFFNFQREN AKQ +PEQNG+THFEAGD+RAKEYV LLKSNDPVGFNIVDVLAWGSI
Sbjct: 69  GRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVGLLKSNDPVGFNIVDVLAWGSI 128

Query: 351 GHIVAYYILATSSNGYDPKFFG 286
           GHIVAYYILATSSNGYDPKFFG
Sbjct: 129 GHIVAYYILATSSNGYDPKFFG 150


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