BLASTX nr result

ID: Papaver23_contig00003055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003055
         (1185 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   117   6e-24
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   111   3e-22
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   106   1e-20
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...   105   2e-20
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...    92   3e-16

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  117 bits (293), Expect = 6e-24
 Identities = 90/285 (31%), Positives = 135/285 (47%), Gaps = 29/285 (10%)
 Frame = -2

Query: 1079 QIVGSCNGLVCIRVPHHSRLLDPVYICNPITTEYINLPR-IQHKKGFVVSGFGYHPSDNK 903
            ++VGSCNGL+C+     S   D VY+ NP T ++  LP+ +Q+    VV GFGYHP    
Sbjct: 123  EVVGSCNGLLCLA---DSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEV 179

Query: 902  YKVIRIHYPDRLYSD-----KPVTTKGSVEIYTLGSGTRWRSIGEITYAISR--RGVLAN 744
            YKV+++ Y    Y       +   ++  V++ TLGS T WRS+G+++Y + R     L N
Sbjct: 180  YKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSYQLDRWPSEALVN 238

Query: 743  GSLYWLD----YEQANIVAFDLLNEEFRVLPNVPPCLEMSDKALFKRRKTWYQMRVLGGY 576
            G L+W+     Y    IV+FDL +E+FR +P  P C  +S        +  Y + VLGG 
Sbjct: 239  GRLHWVTRPRRYVTRFIVSFDLADEQFREIPK-PDCGGLS--------RCNYHLLVLGGC 289

Query: 575  LCFIYYEFRKDLYIWAYKNKQQDIKDLKEVGGYQSCSWSLEFQIPASIVN--VEDFYEP- 405
            L    +     L +W    K+ D+K+          SW  EF I A +     +D   P 
Sbjct: 290  LSAAVHRSNGKLEVWVM--KEYDVKE----------SWIKEFNIGAHLPKGLKQDVNRPH 337

Query: 404  --------------FALTKNNEVLMWVNKRGIRCYDKKTGSLKEL 312
                            L KN E+L+    R +  Y+ + G  K+L
Sbjct: 338  RIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLVSYNPERGKFKDL 382


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  111 bits (278), Expect = 3e-22
 Identities = 88/275 (32%), Positives = 130/275 (47%), Gaps = 19/275 (6%)
 Frame = -2

Query: 1079 QIVGSCNGLVCIRVPHHSRLLDPVYICNPITTEYINLPR-IQHKKGFVVSGFGYHPSDNK 903
            ++VGSCNGL+C+     S   D +YI NP T  Y  LP+ +Q+    VV GFG++P  N+
Sbjct: 122  EVVGSCNGLLCLS---DSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNE 178

Query: 902  YKVIRIHYPDRLYSDKPVTTK-----GSVEIYTLGSGTRWRSIGEITYAISRRG--VLAN 744
            YKVIRI Y    +   P + +       V+I TLG    WRS+G+++Y + RR    L N
Sbjct: 179  YKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGC-PGWRSLGKVSYRLVRRASETLVN 237

Query: 743  GSLYWLDYEQAN-----IVAFDLLNEEFRVLPNVPPCLEMSDKALFKRRKTWYQMRVLGG 579
            G L+W+     N     +V+FDL +E+FR +P  P C  ++        +  Y + VL G
Sbjct: 238  GRLHWVSRPCRNKPARRLVSFDLTDEQFREVPK-PDCGGLN--------RCDYHLAVLRG 288

Query: 578  YLCFIYYEFRKDLYIWA---YKNKQQDIKDLKEVGGYQSCSWSLEFQIPASI---VNVED 417
             L    Y     L IW    Y  K+  +K+   +G Y           P  I    +   
Sbjct: 289  CLSVAVYCNYGRLEIWVMKEYNVKESWVKEY-NIGAYMPKGLKQNLVRPLKIWKNASNGR 347

Query: 416  FYEPFALTKNNEVLMWVNKRGIRCYDKKTGSLKEL 312
                  + KN E+L+    R +  YD K G  K++
Sbjct: 348  AVRALCVLKNGEILLEYKNRALVSYDPKKGKFKDI 382


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  106 bits (265), Expect = 1e-20
 Identities = 93/305 (30%), Positives = 142/305 (46%), Gaps = 30/305 (9%)
 Frame = -2

Query: 1079 QIVGSCNGLVCIRVPHHSRLLDPVYICNPITTEYINLPR-IQHKKGFVVSGFGYHPSDNK 903
            ++VGSCNGL+C+     S   D +YI NP T  Y  LP+ +Q+    VVSGFG++P   +
Sbjct: 123  EVVGSCNGLLCLS---DSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKE 179

Query: 902  YKVIRIHYPDRLYSDKPVTTK-----GSVEIYTLGSGTRWRSIGEITYAISRR--GVLAN 744
            YKVIRI Y    +   P + +       V+I TLG    WRS+G+++Y + RR  G L N
Sbjct: 180  YKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGC-PEWRSLGKVSYRLVRRASGALVN 238

Query: 743  GSLYWLDYEQAN-----IVAFDLLNEEFRVLPNVPPCLEMSDKALFKRRKTWYQMRVLGG 579
            G L+W+     N     +V+FDL +E+FR + + P C  ++        +  Y + VL G
Sbjct: 239  GRLHWISRPCRNKPARRLVSFDLTDEQFREV-SKPDCGGLN--------RCNYHLVVLRG 289

Query: 578  YLCFIYYEFRKDLYIWAYKNKQQDIKDLKEVGGYQSCSWSLEFQI----PASIVNVED-- 417
             L    Y     L IW    K+ ++K+          SW  E+ I    P  +   +D  
Sbjct: 290  CLSAAVYCNYGRLEIWVM--KEYNVKE----------SWVKEYNIGAYMPKGLKQNQDRQ 337

Query: 416  -----------FYEPFALTKNNEVLMWVNKRGIRCYDKKTGSLKELVEDDFSMGYCQGIP 270
                             + KN E+L+    R +  YD K G  K+ +E   +  + Q + 
Sbjct: 338  LKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPKNGKFKD-IELQGAPNWFQTVV 396

Query: 269  HMNCL 255
            H+  L
Sbjct: 397  HVGSL 401


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
            gi|223528011|gb|EEF30092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 410

 Score =  105 bits (262), Expect = 2e-20
 Identities = 89/297 (29%), Positives = 141/297 (47%), Gaps = 41/297 (13%)
 Frame = -2

Query: 1076 IVGSCNGLVCIRVPHHSRLLDPVYICNPITTEYINLPRI-----QHKKGFVVSGFGYHPS 912
            ++GSCNGL+ +      R     YI NP T++Y+ LP       QH+   V +GFG+H +
Sbjct: 119  VIGSCNGLLYLLDSLQQRAN---YIYNPFTSDYLELPEPGQVLNQHR---VATGFGFHST 172

Query: 911  DNKYKVIRI-----------HYPDRLYSDKPVTTKGSVEIYTLGSGT-RWRSIGEITYAI 768
              +YKV+R+           ++  R YS      +  V++ T+G+G+  WRS GE +Y +
Sbjct: 173  TKEYKVVRVVYYRNNKEEGTNFQKRRYS----LPRSEVQVLTVGNGSLTWRSKGETSYQL 228

Query: 767  --SRRGVLANGSLYWLDYEQAN-----IVAFDLLNEEFRVLPNVPPCLEMSDKALFKRRK 609
              +   V+ NG L+WL     N     +++FDL +E+FR +P           A F R  
Sbjct: 229  LGNPSHVVVNGRLHWLSCRYRNQSLRRLISFDLADEQFREVP-------CPVGASFGRHC 281

Query: 608  TWYQMRVLGGYLCFIYYEFRKDLYIWAYKNKQQDIKDLKEVGGYQSCSWSLEFQI----- 444
            +   +  L G L  +   FR+ LYIW    K+  +K+          SW  EF I     
Sbjct: 282  S--HLATLRGCLSGVVQGFRR-LYIWVM--KEYGVKE----------SWVKEFTIGVKLP 326

Query: 443  ------PASIVNVEDFYEPFALTK------NNEVLMWVNKRGIRCYDKKTGSLKELV 309
                  P   +N+++F+ P + TK      N E+L+      + CYD K+G+ KEL+
Sbjct: 327  RELEPYPNQSINLQEFHLPLSQTKVLCLLNNGEILLEFRCGTLVCYDTKSGAFKELI 383


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
            gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
            protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
            unknown protein [Arabidopsis thaliana]
            gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
            [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
            At3g07870 [Arabidopsis thaliana]
            gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
            thaliana]
          Length = 417

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 85/285 (29%), Positives = 130/285 (45%), Gaps = 29/285 (10%)
 Frame = -2

Query: 1076 IVGSCNGLVCIRVPHHSRLLDPVYICNPITTEYINLPRIQHK--KGFVVSGFGYHPSDNK 903
            +VGSCNGL+C+     S   D +Y+ NP TT  + LP   +K     +V GFG+H    +
Sbjct: 119  VVGSCNGLLCLS---DSLYNDSLYLYNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKE 175

Query: 902  YKVIRIHYPDRLYSDKPVTTKG---------SVEIYTLGSGT-----RWRSIGEITYAIS 765
            YKV++I Y     S+     +G          V+I TL S T      WRS+G+  Y   
Sbjct: 176  YKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFV 235

Query: 764  RRG--VLANGSLYWLDYEQANI-----VAFDLLNEEFRVLPNVPPCLEMSDKALFKRRKT 606
            +R    L NG L+++   + ++     V+FDL +EEF+ +P  P C  ++        +T
Sbjct: 236  KRSSEALVNGRLHFVTRPRRHVPDRKFVSFDLEDEEFKEIPK-PDCGGLN--------RT 286

Query: 605  WYQMRVLGGYLCFIYYEFRKDLYIWAYKN---KQQDIKDLKEVGGYQSCSWSLEFQIPAS 435
             +++  L G LC + Y     L IW  K    K+   K+   +G Y           P  
Sbjct: 287  NHRLVNLKGCLCAVVYGNYGKLDIWVMKTYGVKESWGKEY-SIGTYLPKGLKQNLDRPMW 345

Query: 434  I-VNVED--FYEPFALTKNNEVLMWVNKRGIRCYDKKTGSLKELV 309
            I  N E+        L +N E+L+    R +  YD K G  K+L+
Sbjct: 346  IWKNAENGKVVRVLCLLENGEILLEYKSRVLVAYDPKLGKFKDLL 390


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