BLASTX nr result

ID: Papaver23_contig00003033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003033
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protei...   164   1e-38
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   164   1e-38
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   164   1e-38
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   163   3e-38
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   162   4e-38

>ref|XP_003606827.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507882|gb|AES89024.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 988

 Score =  164 bits (415), Expect = 1e-38
 Identities = 77/107 (71%), Positives = 95/107 (88%)
 Frame = +1

Query: 274 EEPPYVIVVHGPPKVGKSLLIRSLVKRYTKKNVNKLDMQGPVTIISGKQRRIQFVECPNN 453
           E PP+VIVV GPP+VGKSLLI+SL+K YTK+N+   +++GP+TI+SGKQRR+QFVECPN+
Sbjct: 80  EPPPFVIVVQGPPQVGKSLLIKSLIKHYTKQNLP--EVRGPITIVSGKQRRLQFVECPND 137

Query: 454 INGMLDAAKYADAVMLLIDADTGFQMETFEFVNILRVHGMPKVMGVL 594
           INGM+DAAKYAD  +LLID   GF+METFEF+NIL+VHG PKVMGVL
Sbjct: 138 INGMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVL 184



 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = +1

Query: 94  EGEGFRPGTYLRLEVRDIPFEIVENYDPYHPILVGGISPGEENIGYMQ 237
           E EGFR GTYLRLEV D+P E+VE++DPYHPILVGG+  GEEN+GYMQ
Sbjct: 767 EVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQ 814


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  164 bits (415), Expect = 1e-38
 Identities = 77/107 (71%), Positives = 95/107 (88%)
 Frame = +1

Query: 274 EEPPYVIVVHGPPKVGKSLLIRSLVKRYTKKNVNKLDMQGPVTIISGKQRRIQFVECPNN 453
           E PP+VIVV GPP+VGKSLLI+SL+K YTK+N+   +++GP+TI+SGKQRR+QFVECPN+
Sbjct: 80  EPPPFVIVVQGPPQVGKSLLIKSLIKHYTKQNLP--EVRGPITIVSGKQRRLQFVECPND 137

Query: 454 INGMLDAAKYADAVMLLIDADTGFQMETFEFVNILRVHGMPKVMGVL 594
           INGM+DAAKYAD  +LLID   GF+METFEF+NIL+VHG PKVMGVL
Sbjct: 138 INGMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVL 184



 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = +1

Query: 94  EGEGFRPGTYLRLEVRDIPFEIVENYDPYHPILVGGISPGEENIGYMQ 237
           E EGFR GTYLRLEV D+P E+VE++DPYHPILVGG+  GEEN+GYMQ
Sbjct: 767 EVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQ 814


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
           gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
           BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  164 bits (415), Expect = 1e-38
 Identities = 77/107 (71%), Positives = 95/107 (88%)
 Frame = +1

Query: 274 EEPPYVIVVHGPPKVGKSLLIRSLVKRYTKKNVNKLDMQGPVTIISGKQRRIQFVECPNN 453
           E PP+VIVV GPP+VGKSLLI+SL+K YTK+N+   +++GP+TI+SGKQRR+QFVECPN+
Sbjct: 80  EPPPFVIVVQGPPQVGKSLLIKSLIKHYTKQNLP--EVRGPITIVSGKQRRLQFVECPND 137

Query: 454 INGMLDAAKYADAVMLLIDADTGFQMETFEFVNILRVHGMPKVMGVL 594
           INGM+DAAKYAD  +LLID   GF+METFEF+NIL+VHG PKVMGVL
Sbjct: 138 INGMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVL 184



 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = +1

Query: 94  EGEGFRPGTYLRLEVRDIPFEIVENYDPYHPILVGGISPGEENIGYMQ 237
           E EGFR GTYLRLEV D+P E+VE++DPYHPILVGG+  GEEN+GYMQ
Sbjct: 767 EVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQ 814


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  163 bits (412), Expect = 3e-38
 Identities = 74/107 (69%), Positives = 94/107 (87%)
 Frame = +1

Query: 274 EEPPYVIVVHGPPKVGKSLLIRSLVKRYTKKNVNKLDMQGPVTIISGKQRRIQFVECPNN 453
           E PP+V+VVHGPP+VGKSLLI+ LVK YTK N+   +++GP+TI+SGK+RR+QFVECPN+
Sbjct: 80  EPPPFVVVVHGPPQVGKSLLIKCLVKHYTKHNIQ--EVRGPITIVSGKKRRVQFVECPND 137

Query: 454 INGMLDAAKYADAVMLLIDADTGFQMETFEFVNILRVHGMPKVMGVL 594
           INGM+DAAK+AD  +LLID   GF+METFEF+NIL+VHG PK+MGVL
Sbjct: 138 INGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKIMGVL 184



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/48 (68%), Positives = 41/48 (85%)
 Frame = +1

Query: 94  EGEGFRPGTYLRLEVRDIPFEIVENYDPYHPILVGGISPGEENIGYMQ 237
           E EGF+ GTYLRLE+ D+PFE+VE++DP  PILVGGI  GEE++GYMQ
Sbjct: 773 EIEGFQTGTYLRLELHDVPFEMVEHFDPCDPILVGGIGLGEEHVGYMQ 820


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  162 bits (411), Expect = 4e-38
 Identities = 76/107 (71%), Positives = 94/107 (87%)
 Frame = +1

Query: 274 EEPPYVIVVHGPPKVGKSLLIRSLVKRYTKKNVNKLDMQGPVTIISGKQRRIQFVECPNN 453
           E  PYV+VVHGPP+VGKSLLI+SLVK YTK N++  +++GP+TI+SGK RR+QFVECPN+
Sbjct: 83  EPAPYVVVVHGPPQVGKSLLIKSLVKHYTKHNLS--EVRGPITIVSGKNRRLQFVECPND 140

Query: 454 INGMLDAAKYADAVMLLIDADTGFQMETFEFVNILRVHGMPKVMGVL 594
           INGM+DAAK+AD  +LLID   GF+METFEF+NIL+VHG PKVMGVL
Sbjct: 141 INGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVL 187



 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 36/48 (75%), Positives = 43/48 (89%)
 Frame = +1

Query: 94  EGEGFRPGTYLRLEVRDIPFEIVENYDPYHPILVGGISPGEENIGYMQ 237
           E EGFR GTYLRLEV D+PFE+VE++DP+HP+LVGGI  GEEN+GYMQ
Sbjct: 732 EVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGIGLGEENVGYMQ 779


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