BLASTX nr result

ID: Papaver23_contig00003013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00003013
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE74631.1| unknown [Vitis vinifera]                               202   8e-50
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...   201   2e-49
ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containin...   185   1e-44
ref|XP_002526718.1| nucleic acid binding protein, putative [Rici...   184   2e-44
ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|2...   181   3e-43

>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score =  202 bits (515), Expect = 8e-50
 Identities = 111/199 (55%), Positives = 135/199 (67%), Gaps = 2/199 (1%)
 Frame = +1

Query: 328 MCGGPDXXXXXXXXXXXXXXXEETKLPTNSMNQLTIDTXXXXXXXXXXXXXXX--GFKQL 501
           MC GP+                E+K  T  MN LT++T                 GFK+ 
Sbjct: 1   MCSGPEQSKTKSSSSPSST---ESKTNTIDMNHLTVETEDSFSSLHELAANNDVDGFKRS 57

Query: 502 VERDASAVNQIGLWYGRKKGSKQMVLEHRTPLMVAATYGNVDVLKFILSFSEADVNRSCG 681
           +ERDASA+N++GLWYGR+KGSKQMVLEHRTP+MVAATYG+V+VLK ILS S+ADVN SCG
Sbjct: 58  LERDASAINEVGLWYGRQKGSKQMVLEHRTPMMVAATYGSVEVLKLILSRSDADVNISCG 117

Query: 682 PDKSTALHCAASGGSVNADEVVNXXXXSGANASSFDASGCRPADVIVVSPKLPNLKASLE 861
           PDKSTALHCAASGGSVNA +VV     +GA+ +S DA+G  P DVIVV PKLP+++ +LE
Sbjct: 118 PDKSTALHCAASGGSVNAVDVVKLLLSAGADPNSMDANGHFPVDVIVVPPKLPSMRVALE 177

Query: 862 TLLSINGSDVSATERNLQI 918
            LL    SD S  ERNL+I
Sbjct: 178 ELLVNGASDGSVGERNLRI 196


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
           vinifera]
          Length = 740

 Score =  201 bits (512), Expect = 2e-49
 Identities = 110/199 (55%), Positives = 136/199 (68%), Gaps = 2/199 (1%)
 Frame = +1

Query: 328 MCGGPDXXXXXXXXXXXXXXXEETKLPTNSMNQLTIDTXXXXXXXXXXXXXXX--GFKQL 501
           MC GP+                E+K  T  MN LT++T                 GFK+ 
Sbjct: 1   MCSGPEQSKTKSSSSPSST---ESKTNTIDMNHLTVETEDSFSSLHELAANNDVDGFKRS 57

Query: 502 VERDASAVNQIGLWYGRKKGSKQMVLEHRTPLMVAATYGNVDVLKFILSFSEADVNRSCG 681
           +ERDASA+N++GLWYGR+KGSKQMVL+HRTP+MVAATYG+V+VLK ILS S+ADVN SCG
Sbjct: 58  LERDASAINEVGLWYGRQKGSKQMVLKHRTPMMVAATYGSVEVLKLILSRSDADVNISCG 117

Query: 682 PDKSTALHCAASGGSVNADEVVNXXXXSGANASSFDASGCRPADVIVVSPKLPNLKASLE 861
           PDKSTALHCAASGGSVNA +VV     +GA+ +S DA+G  P DVIVV PKLP+++ +LE
Sbjct: 118 PDKSTALHCAASGGSVNAVDVVKLLLSAGADPNSMDANGHFPVDVIVVPPKLPSMRVALE 177

Query: 862 TLLSINGSDVSATERNLQI 918
            LL  + SD S  ERNL+I
Sbjct: 178 ELLVNSASDGSVGERNLRI 196


>ref|XP_002277747.2| PREDICTED: zinc finger CCCH domain-containing protein 30-like
           [Vitis vinifera]
          Length = 703

 Score =  185 bits (470), Expect = 1e-44
 Identities = 95/143 (66%), Positives = 115/143 (80%)
 Frame = +1

Query: 490 FKQLVERDASAVNQIGLWYGRKKGSKQMVLEHRTPLMVAATYGNVDVLKFILSFSEADVN 669
           FKQ +ER+ S V++IG WYGR+KGSKQMVLE+RTPLMVAATYG++DV+K ILS S++DVN
Sbjct: 27  FKQSIEREPSGVDEIGQWYGRQKGSKQMVLEYRTPLMVAATYGSIDVMKLILSLSDSDVN 86

Query: 670 RSCGPDKSTALHCAASGGSVNADEVVNXXXXSGANASSFDASGCRPADVIVVSPKLPNLK 849
           R CG DKSTALHCAASGGSVNA +VV      GA+ +S DA+G RP DV+VV PKL ++K
Sbjct: 87  RFCGLDKSTALHCAASGGSVNAVDVVKLLLLVGADPNSLDANGHRPVDVLVVPPKLQDVK 146

Query: 850 ASLETLLSINGSDVSATERNLQI 918
           A+LE LL+ NGS V   ERNL I
Sbjct: 147 ATLEELLATNGSSV---ERNLSI 166


>ref|XP_002526718.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533907|gb|EEF35632.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 728

 Score =  184 bits (468), Expect = 2e-44
 Identities = 102/199 (51%), Positives = 130/199 (65%), Gaps = 2/199 (1%)
 Frame = +1

Query: 328 MCGGPDXXXXXXXXXXXXXXXEETKLPTNSMNQLTIDTXXXXXXXXXXXXXXX--GFKQL 501
           MC G +               E+++     MN LT++T                 GFK+ 
Sbjct: 1   MCCGLERLKPTPFPTLLLISSEDSRSTNIDMNHLTVETEDTFASLLELAANNDIEGFKRT 60

Query: 502 VERDASAVNQIGLWYGRKKGSKQMVLEHRTPLMVAATYGNVDVLKFILSFSEADVNRSCG 681
           +ERD S V++IGLWYGR+KGSKQMV EHRTPLMVAATYG++DV+K ILS S+ADVNRSCG
Sbjct: 61  IERDPSCVDEIGLWYGRRKGSKQMVNEHRTPLMVAATYGSIDVIKLILSSSDADVNRSCG 120

Query: 682 PDKSTALHCAASGGSVNADEVVNXXXXSGANASSFDASGCRPADVIVVSPKLPNLKASLE 861
            DKSTALHC ASGG+VNA +VV     +GA+ +S DA+G RP DVIVV PKL  +K +LE
Sbjct: 121 LDKSTALHCVASGGAVNAVDVVKLLLAAGADPNSIDANGHRPIDVIVVPPKLDGVKFALE 180

Query: 862 TLLSINGSDVSATERNLQI 918
            LL  +GS +   ER+L++
Sbjct: 181 ELLVNDGSVI---ERDLRV 196


>ref|XP_002308038.1| predicted protein [Populus trichocarpa] gi|222854014|gb|EEE91561.1|
           predicted protein [Populus trichocarpa]
          Length = 735

 Score =  181 bits (459), Expect = 3e-43
 Identities = 99/178 (55%), Positives = 126/178 (70%), Gaps = 3/178 (1%)
 Frame = +1

Query: 394 ETKLPTNS-MNQLTIDTXXXXXXXXXXXXXXX--GFKQLVERDASAVNQIGLWYGRKKGS 564
           +  LP+N  MN LT++T                 GFKQ +ERD S V++IGLWYGRKKGS
Sbjct: 22  DENLPSNIVMNHLTVETEDTFASLLELAANNDVEGFKQSIERDLSCVDEIGLWYGRKKGS 81

Query: 565 KQMVLEHRTPLMVAATYGNVDVLKFILSFSEADVNRSCGPDKSTALHCAASGGSVNADEV 744
           KQMV EHRTPLMVA+TYG++DV+K ILS S  DVNRSCG +KSTALHCAASGG+VNA +V
Sbjct: 82  KQMVNEHRTPLMVASTYGSIDVIKVILSLSYVDVNRSCGVEKSTALHCAASGGAVNAVDV 141

Query: 745 VNXXXXSGANASSFDASGCRPADVIVVSPKLPNLKASLETLLSINGSDVSATERNLQI 918
           V     +GA+ +  DA+G RP DVIVV PKL +++  L+ LL+ +GS V   E+NL++
Sbjct: 142 VKLLLAAGADCNLADANGHRPIDVIVVPPKLQDVRLVLKDLLAADGSHV---EQNLRV 196


Top