BLASTX nr result

ID: Papaver23_contig00002871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002871
         (1445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]   104   5e-20
emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]    99   2e-18
ref|NP_174520.1| putative F-box protein [Arabidopsis thaliana] g...    84   7e-14
ref|NP_201386.1| F-box protein [Arabidopsis thaliana] gi|7517065...    84   9e-14
ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-12

>emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]
          Length = 862

 Score =  104 bits (260), Expect = 5e-20
 Identities = 99/345 (28%), Positives = 154/345 (44%), Gaps = 18/345 (5%)
 Frame = +2

Query: 2    LPVKSLMQLKCLSKHWCSVIQKDRHFIDLHFHQSKARTSLLLTVPRERNGYTESWFGNNK 181
            +PVKSL+Q + + K W S+I  D  FI+ H  +S++ T+LL++ P       +     + 
Sbjct: 493  IPVKSLLQCRGVCKRWRSMIS-DPSFIEAH--RSRSATTLLISFPDTHRPRRK-----HH 544

Query: 182  LYPFRVFLATADLFSEGGEVASVIHTTTREIDTGSYSISKPVNGLICLFDSEE------N 343
            L+  R          E  +++   H  T          S+ VNGLICL++  +      +
Sbjct: 545  LFSIRD--------GEARQLSGSRHWNT----------SQSVNGLICLYEQHDRSFPKLS 586

Query: 344  HGVQVCNLSTREVTTWIKSTFLSNLNLEDKGAHYLKSSRCNLGFDPATKEHKVICIWTVR 523
              V +CN STRE  T +  T  SN +L     H       +LGFDP+TK +K++ +W  R
Sbjct: 587  FRVTLCNPSTRERVT-LPPTRFSNPDLCFDHQHI------SLGFDPSTKTYKILKVWFER 639

Query: 524  GRQV-CEVLTLGDHTWRIIDEVLPAYNFRNSHTYGDSVYVNGSIYWCSCKRNGD------ 682
               + CE+LTLG   WRII + L  Y           + +NG+IYW   +   +      
Sbjct: 640  FNSIMCEILTLGXRAWRIIKDGL-EYTLE-----AKGICLNGTIYWADARHISEDYPHFV 693

Query: 683  --ADFIVAFDLGSEKFREIRVPDFILDQPQDNDKYVHKCV-NILELSGRVALLGRVNGYT 853
               + ++AFD+G EKFR + VP  +            KC+ +I+++ G +A+        
Sbjct: 694  VMQNRVIAFDVGEEKFRSVPVPPEV--------PIWDKCMSSIIQIGGHMAIAD------ 739

Query: 854  VKLWLFDDVYVKKENNTSTAPLDGKETDNQN--WEEITIRLPYFW 982
                     Y       ST  L  K  D+ N  W +  I LP  W
Sbjct: 740  ---------YQHVATGISTVMLIWKLEDSVNGIWSQKRILLPESW 775


>emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]
          Length = 289

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 88/293 (30%), Positives = 139/293 (47%), Gaps = 15/293 (5%)
 Frame = +2

Query: 2   LPVKSLMQLKCLSKHWCSVIQKDRHFIDLHFHQSKARTSLLLTVPRERNGYTESWFGNNK 181
           +PVKSL+Q + + K W S+I  D  F++ H  QS++ T+LL++ P  R        G   
Sbjct: 33  IPVKSLLQFRSVCKSWRSMIS-DPSFVEAH--QSRSATTLLISFPDTRRPS-----GRRH 84

Query: 182 LYPFRVFLATADLFSEGGEVASVIHTTTREIDTGSYSISKPVNGLICLFDS------EEN 343
           L+      + +D   E  +++   H          ++ S+ VNGLIC+++       + +
Sbjct: 85  LF------SISD--GEARQLSGFSH----------WNNSQSVNGLICIYEQLVPSSPKLS 126

Query: 344 HGVQVCNLSTREVTTWIKSTFLSNLNLEDKGAHYLKSSRCNLGFDPATKEHKVICIWTVR 523
             V VCN ST E  T   + F        K          +LGFDP+TK +K++  W  R
Sbjct: 127 FRVIVCNPSTGERVTLPPTHF-------SKADFSFCHQNISLGFDPSTKTYKILRAWWGR 179

Query: 524 -GRQVCEVLTLGDHTWRIIDEVLPAYNFRNSHTYGDSVYVNGSIYWCS----CKRNGD-- 682
            G  + E+ TLG H WRII +  P Y           + +NG+IYW +     K N    
Sbjct: 180 YGGPIHEIFTLGSHAWRIIKDD-PEYALETK-----GICLNGTIYWAATFDLSKDNSSFV 233

Query: 683 --ADFIVAFDLGSEKFREIRVPDFILDQPQDNDKYVHKCVNILELSGRVALLG 835
              + ++AFD+G EKFR + VP     +    +KY     NI+++ G +A+ G
Sbjct: 234 VMKNRVIAFDVGEEKFRSVPVP----PEAPIWEKYKS---NIIQIGGHMAIAG 279


>ref|NP_174520.1| putative F-box protein [Arabidopsis thaliana]
           gi|75264179|sp|Q9LQL5.1|FB30_ARATH RecName:
           Full=Putative F-box protein At1g32420
           gi|8920618|gb|AAF81340.1|AC007767_20 Contains similarity
           to a hypothetical protein F6D8.29 gi|5903056 from
           Arabidopsis thaliana BAC F6D8 gb|AC008016 [Arabidopsis
           thaliana] gi|332193364|gb|AEE31485.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 302

 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 81/302 (26%), Positives = 133/302 (44%), Gaps = 4/302 (1%)
 Frame = +2

Query: 2   LPVKSLMQLKCLSKHWCSVIQKDRHFIDLHFHQSKARTSLLLTVPRERNGYTESWFGNNK 181
           LP KSL++ +C+SK W S+I   R FID     S    SL    PR+     +  F +  
Sbjct: 49  LPAKSLLRFQCVSKQWLSIISSRRDFID-----SIVTRSLTQPPPRD----IKLIFHHQV 99

Query: 182 LYPFRVFLATADLFSEGGEVASVIHTTTREIDTGSYSISKPVNGLICLFDSEENHGVQVC 361
           LYP   F   +  + +  +  S+   TTR     SY     V GLIC + S     V + 
Sbjct: 100 LYPGPHFFIFSSTYPQNTDKESL---TTR---ASSYHY---VRGLICCW-SHCPTTVDIY 149

Query: 362 NLSTREVTTWIKSTFLSNLNLEDKGAHYLKSSRCNLGFDPATKEHKVICIWTVRGRQV-C 538
           N +TR+  T      + + N       Y     C  G+DP   ++KV+ +      +  C
Sbjct: 150 NPTTRQYYT------VPDTN------RYQYIETCFFGYDPVENQYKVMVLPKYYMEESPC 197

Query: 539 EVLTLGD---HTWRIIDEVLPAYNFRNSHTYGDSVYVNGSIYWCSCKRNGDADFIVAFDL 709
           +V T+GD     WR I  +   +  +      D+V +NG IY+ +    G   F+V+FD+
Sbjct: 198 QVFTVGDPIEKPWRDIQGIGVHFLLK------DAVCINGVIYYQATNEYGSTYFLVSFDV 251

Query: 710 GSEKFREIRVPDFILDQPQDNDKYVHKCVNILELSGRVALLGRVNGYTVKLWLFDDVYVK 889
            SEKF  ++ P  + D P            ++   G++ L+       +++W+ +D   K
Sbjct: 252 RSEKFNHVKAPKILTDHP----------CTLINYQGKLGLI-MCCKKGLEIWVMEDAEKK 300

Query: 890 KE 895
           ++
Sbjct: 301 QD 302


>ref|NP_201386.1| F-box protein [Arabidopsis thaliana]
            gi|75170652|sp|Q9FHP3.1|FB300_ARATH RecName: Full=F-box
            protein At5g65850 gi|9759569|dbj|BAB11132.1| unnamed
            protein product [Arabidopsis thaliana]
            gi|50253490|gb|AAT71947.1| At5g65850 [Arabidopsis
            thaliana] gi|51972136|gb|AAU15172.1| At5g65850
            [Arabidopsis thaliana] gi|332010731|gb|AED98114.1| F-box
            protein [Arabidopsis thaliana]
          Length = 392

 Score = 84.0 bits (206), Expect = 9e-14
 Identities = 97/363 (26%), Positives = 149/363 (41%), Gaps = 14/363 (3%)
 Frame = +2

Query: 2    LPVKSLMQLKCLSKHWCSVIQKDRHFIDLHFHQSKARTSLLLTVPRERNGYTESWFGNNK 181
            LP KS+   +C+SK W SVI + + F +L   +S  R  LL    ++ N           
Sbjct: 47   LPAKSIATCRCVSKLWISVICR-QDFTELFLTRSLHRPQLLFCCKKDGN----------- 94

Query: 182  LYPFRVFLATADLFSEGGEVASVIHTTTREIDTGSYSISKPVNGLICLFDSEENHGVQV- 358
                 +F  ++       E +S I      +    Y IS+PVNGLIC    E N  V V 
Sbjct: 95   -----LFFFSSPQLQNPYENSSAISLKNFSL---CYKISRPVNGLICFKRKEMNETVTVI 146

Query: 359  CNLSTREVTTWIKSTFLSNLNLEDKGAHYLKSSRCNLGFDPATKEHKVICIWTVRGRQVC 538
            CN ST              L+L       +  SR  + ++P  K+ KV+  +     QV 
Sbjct: 147  CNPSTGH-----------TLSLPKPMKTSIGPSRFFV-YEPIQKQFKVLLSYKSDEHQVL 194

Query: 539  EVLTLGDHTWRIIDEVLPAYNFRNSHTYGDS-VYVNGSIYWCSCKRNGDADFIVAFDLGS 715
              L  G+ +WRII+  +P       H  G S + +NG +Y+ +   +     IV FD+ S
Sbjct: 195  -TLGTGELSWRIIECSMP-------HILGMSEICINGVLYYPAINLSSGDYIIVCFDVRS 246

Query: 716  EKFREIRVPDFILDQPQDNDKYVHKCVNILELSGRVALL---------GRVNGYTVKLWL 868
            EKFR I V +  +    D          ++  +G++A L         GR    +++LW+
Sbjct: 247  EKFRFITVMEEFIKAAHDG--------TLINYNGKLASLVSERYCFVDGR--SKSIELWV 296

Query: 869  FDDVYVKKENNTSTAPLDGKETDNQNWEEITIRLPYFWG---GDRSLDFVSVVGTDLIIL 1039
              D                   + + W + T  LP +W    G  +L FV V  T+ I+L
Sbjct: 297  LQD------------------AEKKEWSKHTYVLPAWWQHRIGTLNLRFVGVTRTNEIML 338

Query: 1040 KSC 1048
              C
Sbjct: 339  SPC 341


>ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|222852324|gb|EEE89871.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 86/325 (26%), Positives = 149/325 (45%), Gaps = 33/325 (10%)
 Frame = +2

Query: 2   LPVKSLMQLKCLSKHWCSVIQKDRHFIDLHFHQSKAR---TSLLLTVPRERNGYTESWFG 172
           LP KS+++ +C+S+ WCS    D  F  LH  +S  R   ++LLL+ P   +  T   F 
Sbjct: 38  LPAKSVVRFRCVSRTWCS-FTHDPFFASLHHARSLTRDNGSALLLSYPDPSSSSTSFSFF 96

Query: 173 NNKLYPFRVFLATADLFSEGGEVASVIHTTTREIDTGSYSISKPVNGLICLFDSEENHGV 352
             K               +G     + H     +D     +S+ + G++C+ +   +H V
Sbjct: 97  ERK---------------QGFRNLQISH-----VDQQYTHLSEIIRGILCI-NYRRSHRV 135

Query: 353 QVCNLSTREVTTWIKSTFLSNLNL-EDKGAHY--LKSSRCNLGFDPATKEHKVICIWTV- 520
            +CN++T+E  T  +ST   N+ +  D G  +  +   R + GF+ +T+++KV+ I ++ 
Sbjct: 136 DICNITTQETITLPRST---NIPIRSDAGVDFDIVYEPRYSFGFNSSTRDYKVLNICSIT 192

Query: 521 ------------RGRQVC------EVLTL----GDHTWRIIDEVLPAYNFRNSHTYGDSV 634
                         R+V       E+ T+    G  +WR ID   P Y+        +SV
Sbjct: 193 RYKLQVNPNNGLSTREVSQRTVEFEIFTIGCDRGAGSWRKIDPGYP-YDQELHGLSCESV 251

Query: 635 YVNGSIYWCSCKRNGDADFIVAFDLGSEKFREIRVPDFILDQPQDNDKYVHKCVNILELS 814
             +G I+W    R  D + ++AFDL  EKF+ I+VP   L+         H    + ++ 
Sbjct: 252 CADGVIHW--RHRFFDQEILLAFDLKQEKFQIIQVPKEALE--------FHL---MKQVK 298

Query: 815 GRVALLGRV-NGYT---VKLWLFDD 877
           G + L+G V +GY    + LW+ +D
Sbjct: 299 GCLVLMGHVISGYNRNKIVLWILED 323


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