BLASTX nr result

ID: Papaver23_contig00002832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002832
         (1661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623988.1| F-box/kelch-repeat protein [Medicago truncat...    71   1e-09
ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-09
ref|NP_201386.1| F-box protein [Arabidopsis thaliana] gi|7517065...    67   1e-08
ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273 [Arab...    66   3e-08
ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group] g...    66   3e-08

>ref|XP_003623988.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355499003|gb|AES80206.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 458

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 79/285 (27%), Positives = 123/285 (43%), Gaps = 25/285 (8%)
 Frame = +3

Query: 225  DILSREVLSWLPVKSLMRFKSVSKYWCSLIQEDTTFITLHLERSKSRP---CLLVANLID 395
            D L  EV S+LPVKSL+RFK V+KYW + I  D TF+ LHL RS +R     L+ +++ +
Sbjct: 33   DDLIAEVFSFLPVKSLVRFKCVNKYWKTRI-SDNTFVKLHLNRSATRNPLFTLVTSHITN 91

Query: 396  NRTKYQIMTGDLLLGDKDRGAISAANFHTIRDTDFA------------GCDLMLRPVFGL 539
            + T +    G       D   I  +    I+++ F             GC  ++    GL
Sbjct: 92   DCTDFDGGYG------MDCSVIPYSFNRLIQNSSFTLSVDPYYHLSYQGCSSIVGNCNGL 145

Query: 540  TAFF-GERRDEPGVCICNLSTREVTPWIVSNLLRDVRREDLEASNKFPMATCTLGYNPTS 716
                 G+       C+ N +TR VT     +  R  R       +   + + T G + ++
Sbjct: 146  ILLAGGDDCQVVNFCLWNPATR-VTSQNFGDFCRSPRGHPF--PDDLDLYSFTFGCDIST 202

Query: 717  KEHKVVGIWRSSQPSYVVCEVLTVGDNEWRRIDEVP--PHALELHXXXXXXXXXXXXTTE 890
              +K+V  + +    +    +L++GDN WR+I   P  P    L             T  
Sbjct: 203  GTYKIVASYYNLDGQH-TSRILSIGDNVWRQIQSFPVVPLHFYLGGKAVHDSVYLSGTLN 261

Query: 891  LLRV---FEAGEK----EKKFIVGFDVGSEKFRAIRVPSYVFEQP 1004
             L +   F+   K    E+  IV FD+G+E F   R+PS   E P
Sbjct: 262  WLAIRNEFDYDIKNLRVEQFVIVSFDLGTETFSQYRLPSDFDEMP 306


>ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|222846263|gb|EEE83810.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 68/258 (26%), Positives = 113/258 (43%), Gaps = 4/258 (1%)
 Frame = +3

Query: 222 EDILSREVLSWLPVKSLMRFKSVSKYWCSLIQEDTTFITLHLERSKSRPC---LLVANLI 392
           +DI++ E+L+ LP KSLMRF+ V K W SLI+ D  F+ LH  +S ++PC   LL++   
Sbjct: 35  QDIVA-EILAKLPAKSLMRFRCVCKTWSSLIR-DPFFVKLHQNQSLNKPCKTGLLMS--- 89

Query: 393 DNRTKYQIMTGDLLLGDKD-RGAISAANFHTIRDTDFAGCDLMLRPVFGLTAFFGERRDE 569
              TK+Q+     +  D + + A+        + ++  G         GL        D+
Sbjct: 90  ---TKHQLFNSHFVFADHEGKQALEEDTISIPKSSNVLGI------ANGLACIV---NDK 137

Query: 570 PGVCICNLSTREVTPWIVSNLLRDVRREDLEASNKFPMATCTLGYNPTSKEHKVVGIWRS 749
             + + NLSTRE T   +    +++R +D            + G++P + E+K+V     
Sbjct: 138 HRISVYNLSTREST--TIPPPPQEIRIQD----------RLSFGFDPLANEYKIVKFCAH 185

Query: 750 SQPSYVVCEVLTVGDNEWRRIDEVPPHALELHXXXXXXXXXXXXTTELLRVFEAGEKEKK 929
            +  +   E+ T+G   WRRI+    +                       V    E  K 
Sbjct: 186 DKEQF---EIFTLGTERWRRINRKHYNFYGGAKWYDFKEAICVKGVIYWMVKSMAESLKI 242

Query: 930 FIVGFDVGSEKFRAIRVP 983
            +  FDV  EKF+ + VP
Sbjct: 243 NLHSFDVHGEKFQQVAVP 260


>ref|NP_201386.1| F-box protein [Arabidopsis thaliana]
            gi|75170652|sp|Q9FHP3.1|FB300_ARATH RecName: Full=F-box
            protein At5g65850 gi|9759569|dbj|BAB11132.1| unnamed
            protein product [Arabidopsis thaliana]
            gi|50253490|gb|AAT71947.1| At5g65850 [Arabidopsis
            thaliana] gi|51972136|gb|AAU15172.1| At5g65850
            [Arabidopsis thaliana] gi|332010731|gb|AED98114.1| F-box
            protein [Arabidopsis thaliana]
          Length = 392

 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 104/401 (25%), Positives = 162/401 (40%), Gaps = 2/401 (0%)
 Frame = +3

Query: 162  EKKSRGNFSKTSVFNFSDDQEDILSREVLSWLPVKSLMRFKSVSKYWCSLIQEDTTFITL 341
            EKK+  N ++ SV        DI+  E+L  LP KS+   + VSK W S+I     F  L
Sbjct: 21   EKKTSPNKTEKSV----QIPVDIII-EILLRLPAKSIATCRCVSKLWISVICRQ-DFTEL 74

Query: 342  HLERSKSRPCLLVANLIDNRTKYQIMTGDLLLGDKDRGAISAANFHTIRDTDFAGCDLML 521
             L RS  RP LL     D         G+L      +      N   I   +F+ C  + 
Sbjct: 75   FLTRSLHRPQLLFCCKKD---------GNLFFFSSPQLQNPYENSSAISLKNFSLCYKIS 125

Query: 522  RPVFGLTAFFGERRDEPGVCICNLSTREVTPWIVSNLLRDVRREDLEASNKFPMATCTLG 701
            RPV GL  F  +  +E    ICN ST           L    +  +  S  F        
Sbjct: 126  RPVNGLICFKRKEMNETVTVICNPSTGHTLS------LPKPMKTSIGPSRFFV------- 172

Query: 702  YNPTSKEHKVVGIWRSSQPSYVVCEVLTVGDNE--WRRIDEVPPHALELHXXXXXXXXXX 875
            Y P  K+ KV+  ++S +      +VLT+G  E  WR I+   PH L +           
Sbjct: 173  YEPIQKQFKVLLSYKSDEH-----QVLTLGTGELSWRIIECSMPHILGMSEICINGVLYY 227

Query: 876  XXTTELLRVFEAGEKEKKFIVGFDVGSEKFRAIRVPSYVFEQPESYHSRLFGYNIMLLEL 1055
                       +G+     IV FDV SEKFR I V     +   ++   L  YN  L  L
Sbjct: 228  PAIN-----LSSGD---YIIVCFDVRSEKFRFITVMEEFIK--AAHDGTLINYNGKLASL 277

Query: 1056 DGRLGLFILLEKSGTPKLWVLNEDRNRKNSRSTWTEVSIQLPYTLGGARCRFACDPVPGT 1235
                  F+   +S + +LWVL +   ++ S+ T+  +     + +G    RF    V  T
Sbjct: 278  VSERYCFV-DGRSKSIELWVLQDAEKKEWSKHTYV-LPAWWQHRIGTLNLRFV--GVTRT 333

Query: 1236 DQMILTSYVKASGGKISESSCHSYNWKKKTFNAIDFSGISS 1358
            ++++L+   +     +     + +N ++KT  ++   G+ +
Sbjct: 334  NEIMLSPCYQTVPFDV-----YYFNIERKTMMSVAIQGMEA 369


>ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273 [Arabidopsis lyrata subsp.
            lyrata] gi|297319926|gb|EFH50348.1| hypothetical protein
            ARALYDRAFT_910273 [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 85/331 (25%), Positives = 136/331 (41%), Gaps = 14/331 (4%)
 Frame = +3

Query: 231  LSREVLSWLPVKSLMRFKSVSKYWCSLIQEDTTFITLHLERSKSRP-CLLVANLIDNRTK 407
            L+ E+LS LP KSL+RF++VSK+W S+I+    F+   L RSK+RP  LL     D+R +
Sbjct: 26   LTLEILSRLPAKSLIRFQAVSKFWFSIIR-SKDFVDSFLTRSKTRPRFLLTFKNFDSRKR 84

Query: 408  YQIMTGDLLLGDKDRGAISAANFHTIRDTDFAGCDLMLRPVFGLTAFFGERRDEPGVCIC 587
            +     +    DK     +  +     D  +    +  RPV G       R D   + +C
Sbjct: 85   FIFSAPEHQKNDKSSTVFARHDMTISADRVY---HIRCRPVNGFVCC--TRGD--SIAVC 137

Query: 588  NLSTREVTPWIVSNLLRDVRREDLEASNKFPMATCTLGYNPTSKEHKVVGIW-------- 743
            N +TR++           V+  D+E++ +   A   LGY+P   ++KV+ +         
Sbjct: 138  NPTTRQI-----------VKLPDVESNGRHVYA--RLGYDPVEDQYKVLCVMFYDPYSAK 184

Query: 744  ---RSSQPSYVVCEVLTVGDNEWRRIDEVPPHALELHXXXXXXXXXXXXTTELLRVFEAG 914
               + +QP   V   L     EWR+I        E+               +    F  G
Sbjct: 185  CKRQGTQPEPYVF-TLQSQQKEWRKI--------EITQGVAYRSVDGGICIDGAIYFGDG 235

Query: 915  EKEKKFIVGFDVGSEKFRAIRVP--SYVFEQPESYHSRLFGYNIMLLELDGRLGLFILLE 1088
                  IV FDV SE    I+ P  S + E  +S           LL  +G+LG  +   
Sbjct: 236  RSR---IVRFDVRSETLELIQAPENSLITETSDS----------ALLNYNGKLG-GVDYN 281

Query: 1089 KSGTPKLWVLNEDRNRKNSRSTWTEVSIQLP 1181
             +    LW+L +   ++     W+E+    P
Sbjct: 282  YTRETILWILEDAEKQE-----WSELRFARP 307


>ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group]
           gi|255678938|dbj|BAF25230.2| Os09g0448100, partial
           [Oryza sativa Japonica Group]
          Length = 432

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
 Frame = +3

Query: 243 VLSWLPVKSLMRFKSVSKYWCSLIQEDTTFITLHLERSKSRPCLL-VANLIDNRTKYQIM 419
           +LSWLP KSL+RFKSV K W ++I     F   HLE SK  P +L V    + +   + +
Sbjct: 76  ILSWLPSKSLIRFKSVCKAWHAMISSPC-FTDAHLECSKRNPSILMVPGAYEKQEDGENI 134

Query: 420 TGDLLL----GDKDRGAISAANFHTIRDTDFAGCDLMLRPVF--GLTAFFGERRDEPGVC 581
              ++L    G K    +   NF         G  +  RPV   GL        +   + 
Sbjct: 135 AFMMVLYKYHGGKTMELVHMQNFPL-------GIGVWTRPVHCNGLLLIPTMNLE---MM 184

Query: 582 ICNLSTREVT--PWIVSNLLRDVRREDLEASNKFPMATCTLGYNPTSKEHKVVGIW--RS 749
           ICN STR++   P +  N+    R                 G++P S ++KV   +  R 
Sbjct: 185 ICNPSTRQIVFLPKVSGNICTGTR--------------AGFGFDPHSNKYKVARSFYQRD 230

Query: 750 SQPSYVVC--EVLTVGDNEWRRIDEVPPHALE 839
           S+   +VC  EVLT+G N WR+ ++ PP+ ++
Sbjct: 231 SETQELVCKFEVLTLGTNAWRQTED-PPYPID 261


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