BLASTX nr result
ID: Papaver23_contig00002768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00002768
(424 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g... 164 7e-39
ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g... 119 2e-25
ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g... 119 2e-25
ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [... 110 2e-22
ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g... 110 2e-22
>ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product
[Vitis vinifera]
Length = 704
Score = 164 bits (415), Expect = 7e-39
Identities = 83/113 (73%), Positives = 90/113 (79%)
Frame = -3
Query: 353 SVVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGNY 174
+V CRLLAPSNQVGCVLGRGGKIVEKIRQ SGAQ+RVLPKDHIP CA PGDELIQITG +
Sbjct: 182 AVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQITGTF 241
Query: 173 SAVRKALLAVSSCLQDNFRTDAAASTPNKTPASVLRGSAVPGGQVDQFPSRGY 15
AVRKALL VSSCLQDN R DA S K +L G+ +P GQ+D FP RGY
Sbjct: 242 PAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMP-GQLDSFPQRGY 293
Score = 73.9 bits (180), Expect = 1e-11
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = -3
Query: 353 SVVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGNY 174
+VV RLL S Q+GC+LG+GG I+ ++R+ +GA +R+ K+ +P C DEL+Q+ G+
Sbjct: 411 AVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSL 470
Query: 173 SAVRKALLAVSSCLQDN-FRTDAAASTPNKTP 81
+V+ AL ++S +++ F + S N P
Sbjct: 471 QSVQDALFRITSRIRETIFPLKPSISNVNGPP 502
>ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 119 bits (299), Expect = 2e-25
Identities = 64/112 (57%), Positives = 78/112 (69%)
Frame = -3
Query: 350 VVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGNYS 171
VVCRLLAPS+QVG VLGRGGK VEKIRQ S A V++ PKD P CA P DELIQI+GN+S
Sbjct: 199 VVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIFPKDQNPACASPQDELIQISGNFS 258
Query: 170 AVRKALLAVSSCLQDNFRTDAAASTPNKTPASVLRGSAVPGGQVDQFPSRGY 15
AV KAL +VSSCLQD+ R D++ S+ K+ S++ + P R Y
Sbjct: 259 AVMKALSSVSSCLQDSPRVDSSNSSSTKSLGPTSHASSMSVQDEEPSPRRRY 310
Score = 64.7 bits (156), Expect = 8e-09
Identities = 28/78 (35%), Positives = 50/78 (64%)
Frame = -3
Query: 353 SVVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGNY 174
+VV RLL Q+G ++GRGG I+ +R+G+G +++ P+D I DE++Q+ GN
Sbjct: 426 AVVARLLVHGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNL 485
Query: 173 SAVRKALLAVSSCLQDNF 120
+V+ AL +++ ++D F
Sbjct: 486 PSVQDALFHITNRIRDTF 503
>ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 119 bits (299), Expect = 2e-25
Identities = 64/112 (57%), Positives = 78/112 (69%)
Frame = -3
Query: 350 VVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGNYS 171
VVCRLLAPS+QVG VLGRGGK VEKIRQ S A V++ PKD P CA P DELIQI+GN+S
Sbjct: 199 VVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIFPKDQNPACASPQDELIQISGNFS 258
Query: 170 AVRKALLAVSSCLQDNFRTDAAASTPNKTPASVLRGSAVPGGQVDQFPSRGY 15
AV KAL +VSSCLQD+ R D++ S+ K+ S++ + P R Y
Sbjct: 259 AVMKALSSVSSCLQDSPRVDSSNSSSTKSLGPTSHASSMSVQDEEPSPRRRY 310
Score = 64.7 bits (156), Expect = 8e-09
Identities = 28/78 (35%), Positives = 50/78 (64%)
Frame = -3
Query: 353 SVVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGNY 174
+VV RLL Q+G ++GRGG I+ +R+G+G +++ P+D I DE++Q+ GN
Sbjct: 426 AVVARLLVHGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNL 485
Query: 173 SAVRKALLAVSSCLQDNF 120
+V+ AL +++ ++D F
Sbjct: 486 PSVQDALFHITNRIRDTF 503
>ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 110 bits (274), Expect = 2e-22
Identities = 60/115 (52%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
Frame = -3
Query: 350 VVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLP-KDHIPVCAIPGDELIQITGNY 174
V CR+LA QVGCVLG+GGK VE++RQ SGAQ+RV KD +P CA+ GDELI I+G++
Sbjct: 112 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNKDQVPPCALQGDELIHISGSF 171
Query: 173 SAVRKALLAVSSCLQDNFRTDAAASTPNKTPASVLRGSAVPGGQVDQFPSRGYPP 9
SA RKALL VS+CLQDN R + + + ++ G P G VD R Y P
Sbjct: 172 SAARKALLLVSTCLQDNPRLETSNFSTGRSFGPPGSGVGCPPG-VDSHSQRSYLP 225
Score = 79.3 bits (194), Expect = 3e-13
Identities = 41/115 (35%), Positives = 63/115 (54%)
Frame = -3
Query: 356 NSVVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGN 177
++V RLL PS +GC+LG+GG I+ ++R +GA +R+ + IP CA DEL+Q+TGN
Sbjct: 335 SAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIPRCAQRNDELVQVTGN 394
Query: 176 YSAVRKALLAVSSCLQDNFRTDAAASTPNKTPASVLRGSAVPGGQVDQFPSRGYP 12
+ +++ ALL ++ ++D P K S P G PSR P
Sbjct: 395 FQSIQDALLHITGRIRD-------VIIPPKPHPSGGMSPYPPAGSTPHHPSRQDP 442
>ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 110 bits (274), Expect = 2e-22
Identities = 52/78 (66%), Positives = 65/78 (83%)
Frame = -3
Query: 356 NSVVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGN 177
++V C+L+APS QVGCVLGRGGKIVEKIRQ +GA +RVLPKD P+ PG+E IQITGN
Sbjct: 84 STVSCKLVAPSYQVGCVLGRGGKIVEKIRQDTGAHIRVLPKDQPPLPPPPGEEFIQITGN 143
Query: 176 YSAVRKALLAVSSCLQDN 123
+ AV+KA+L+VS+C DN
Sbjct: 144 FGAVKKAVLSVSACFYDN 161
Score = 59.7 bits (143), Expect = 2e-07
Identities = 31/94 (32%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Frame = -3
Query: 353 SVVCRLLAPSNQVGCVLGRGGKIVEKIRQGSGAQVRVLPKDHIPVCAIPGDELIQITGNY 174
+VV +LL S QVGC+LG+GG ++ ++R+ +GA +R+ K+ I + +E++Q+ G+
Sbjct: 277 AVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSKEQIKYIS-QNEEVVQVIGSL 335
Query: 173 SAVRKALLAVSSCLQDN---FRTDAAASTPNKTP 81
+V+ AL ++S +++ RT S P P
Sbjct: 336 QSVQDALFHITSRIRETIFPIRTPPNFSAPPHLP 369