BLASTX nr result

ID: Papaver23_contig00002618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002618
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra...   270   2e-70
ref|XP_002321780.1| predicted protein [Populus trichocarpa] gi|2...   260   2e-67
ref|XP_003556072.1| PREDICTED: mediator of RNA polymerase II tra...   259   3e-67
ref|NP_001235064.1| uncharacterized protein LOC100527879 [Glycin...   259   4e-67
gb|AFK35607.1| unknown [Lotus japonicus]                              259   5e-67

>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
           [Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
           protein product [Vitis vinifera]
          Length = 198

 Score =  270 bits (690), Expect = 2e-70
 Identities = 132/197 (67%), Positives = 145/197 (73%)
 Frame = -2

Query: 593 MTSDKESNDGALTSPRPGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEA 414
           M S KES+  A T   P NVYKDPDDGRQRFLLELEF+QCLANPTYIHYLAQNRYFEDEA
Sbjct: 1   MDSGKESDSAADTPTSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEA 60

Query: 413 FIGYLKYLKYWQQPEYLKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKN 234
           FIGYLKYL+YWQQPEY+KFIMYPHCL+FLELLQNANFRNAMAHPG+KELAHRQQFF+WKN
Sbjct: 61  FIGYLKYLQYWQQPEYIKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFYWKN 120

Query: 233 YRNNRLKHIVPRXXXXXXXXXXXXXXXXXXLVQXXXXXXXXXXXXXSHTPMHYAMPPGSS 54
           YRNNRLKHI+P+                                    +PM Y +P GSS
Sbjct: 121 YRNNRLKHILPKPLPEPLAGTPAPGPPPQSAPPTTIAVTSAGSPAL--SPMQYGIPAGSS 178

Query: 53  LQKVDSRNVSVDRRKRK 3
           L K D RN ++DRRKRK
Sbjct: 179 LSKNDMRNSAIDRRKRK 195


>ref|XP_002321780.1| predicted protein [Populus trichocarpa] gi|222868776|gb|EEF05907.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score =  260 bits (664), Expect = 2e-67
 Identities = 127/187 (67%), Positives = 136/187 (72%), Gaps = 5/187 (2%)
 Frame = -2

Query: 548 RPGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDEAFIGYLKYLKYWQQPE 369
           RP  +YKDPDDGRQRFLLELEF+QCLANPTYIHYLAQNRYFEDEAFIGYLKYL YWQ+PE
Sbjct: 5   RPKKIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLLYWQRPE 64

Query: 368 YLKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHIVPRXXX 189
           Y+KFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHI+PR   
Sbjct: 65  YMKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWKNYRNNRLKHILPRPLP 124

Query: 188 XXXXXXXXXXXXXXXLVQ-----XXXXXXXXXXXXXSHTPMHYAMPPGSSLQKVDSRNVS 24
                           VQ                    +PM Y MPPGS+  K D R+  
Sbjct: 125 EPAAAPPAPAPPPPLPVQPVPPVPAATHGMLAASGAVPSPMPYGMPPGSAFGKSDIRSSG 184

Query: 23  VDRRKRK 3
            +RRKRK
Sbjct: 185 SERRKRK 191


>ref|XP_003556072.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like [Glycine max]
          Length = 206

 Score =  259 bits (663), Expect = 3e-67
 Identities = 133/206 (64%), Positives = 145/206 (70%), Gaps = 9/206 (4%)
 Frame = -2

Query: 593 MTSDKESNDGALTSPR-PGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 417
           M S  ES +   TSP  P N+YKDPDDG+QRFLLELEF+QCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKIESENSTDTSPSSPKNIYKDPDDGQQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 416 AFIGYLKYLKYWQQPEYLKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWK 237
           AFIGYLKYL+YWQ+PEY+KFIMYPHCLYFLELLQNANFRNAMAHP NKELAHRQQF+FWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWK 120

Query: 236 NYRNNRLKHIVPRXXXXXXXXXXXXXXXXXXLVQ-------XXXXXXXXXXXXXSHTPMH 78
           NYRNNRLKHI+PR                                         + +PM 
Sbjct: 121 NYRNNRLKHILPRSLPEPATPAAPAPASTPSQAPVSALPPVPATSVAVTAAPSQAPSPMP 180

Query: 77  YAMPPGSSLQKVDSRNVSVD-RRKRK 3
           Y MPPGS L K D RN +VD RRKRK
Sbjct: 181 YVMPPGSGLAKNDMRNPTVDNRRKRK 206


>ref|NP_001235064.1| uncharacterized protein LOC100527879 [Glycine max]
           gi|255633448|gb|ACU17082.1| unknown [Glycine max]
          Length = 205

 Score =  259 bits (662), Expect = 4e-67
 Identities = 130/204 (63%), Positives = 143/204 (70%), Gaps = 7/204 (3%)
 Frame = -2

Query: 593 MTSDKESNDGALTSPR-PGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 417
           M S  ES +   TSP  P N+YKDPDDG+QRFLLELEF+QCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKIESENSTDTSPSSPKNIYKDPDDGQQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 416 AFIGYLKYLKYWQQPEYLKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWK 237
           AFIGYLKYL+YWQ+PEY+KFIMYPHC YFLELLQNANFRNAMAHP NKELAHRQQF+FWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCFYFLELLQNANFRNAMAHPTNKELAHRQQFYFWK 120

Query: 236 NYRNNRLKHIVPRXXXXXXXXXXXXXXXXXXLVQXXXXXXXXXXXXXSHT------PMHY 75
           NYRNNRLKHI+PR                                  + T      PM Y
Sbjct: 121 NYRNNRLKHILPRSLPELSATPAAPASTSSQAPVSALPPVPATSVAVTATPSQAPSPMPY 180

Query: 74  AMPPGSSLQKVDSRNVSVDRRKRK 3
            MPPGS L K D RN +VD RK++
Sbjct: 181 GMPPGSGLAKNDMRNPTVDNRKKR 204


>gb|AFK35607.1| unknown [Lotus japonicus]
          Length = 206

 Score =  259 bits (661), Expect = 5e-67
 Identities = 129/206 (62%), Positives = 145/206 (70%), Gaps = 9/206 (4%)
 Frame = -2

Query: 593 MTSDKESNDGALTSPR-PGNVYKDPDDGRQRFLLELEFIQCLANPTYIHYLAQNRYFEDE 417
           MTS  +  +   T+P  P N+YKDPDDGRQRFLLELEF+QCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MTSKTDGENSTDTTPSLPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 416 AFIGYLKYLKYWQQPEYLKFIMYPHCLYFLELLQNANFRNAMAHPGNKELAHRQQFFFWK 237
           AFIGYLKYL+YWQ+PEY+KFIMYPHCLYFLE LQNANFR+AMAHP NKELAHRQQF+FWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLERLQNANFRSAMAHPNNKELAHRQQFYFWK 120

Query: 236 NYRNNRLKHIVPRXXXXXXXXXXXXXXXXXXLVQXXXXXXXXXXXXXSHT--------PM 81
           NYRNNRLKHI+PR                  +               + T        PM
Sbjct: 121 NYRNNRLKHILPRSLPEPSATPALPAPASTPIQPPVPALPPAPATNVAVTASSAQAPSPM 180

Query: 80  HYAMPPGSSLQKVDSRNVSVDRRKRK 3
            Y +PPGS L K D RN +VDRR+RK
Sbjct: 181 PYGIPPGSGLAKSDMRNPTVDRRRRK 206


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