BLASTX nr result

ID: Papaver23_contig00002583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002583
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...   110   8e-22
ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|2...   105   2e-20
gb|AFK38022.1| unknown [Medicago truncatula]                          105   3e-20
ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatu...   105   3e-20
emb|CBI28691.3| unnamed protein product [Vitis vinifera]              104   3e-20

>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  110 bits (274), Expect = 8e-22
 Identities = 62/108 (57%), Positives = 72/108 (66%)
 Frame = -2

Query: 746 IEKAIVNSNLDLNPSNDGEVIRLTVPQLTSXXXXXXXXXXXXXXXXXKVAIRNIRRDAIX 567
           IEKAIVNS+L + P+NDGEVIRLT+PQLTS                 KVA+RNIRRDA+ 
Sbjct: 171 IEKAIVNSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALK 230

Query: 566 XXXXXXXXXXXXEDIVKDLSGDLQKVTDDYMKKIEALFKLKEKEMLKV 423
                       ED VKDLS DLQK+TDDYMKKI+ L+K KEKE+LKV
Sbjct: 231 AYEKLEKEKKLSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV 278


>ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|222843838|gb|EEE81385.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  105 bits (262), Expect = 2e-20
 Identities = 59/108 (54%), Positives = 72/108 (66%)
 Frame = -2

Query: 746 IEKAIVNSNLDLNPSNDGEVIRLTVPQLTSXXXXXXXXXXXXXXXXXKVAIRNIRRDAIX 567
           IEKAIV+S+L L P+NDGEVIR+++PQLTS                 KVA+RNIRRDA+ 
Sbjct: 179 IEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALK 238

Query: 566 XXXXXXXXXXXXEDIVKDLSGDLQKVTDDYMKKIEALFKLKEKEMLKV 423
                       ED VKDLS DLQK+TD+YMKK+E +FK KEKE+LKV
Sbjct: 239 AYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLENIFKQKEKELLKV 286


>gb|AFK38022.1| unknown [Medicago truncatula]
          Length = 262

 Score =  105 bits (261), Expect = 3e-20
 Identities = 58/108 (53%), Positives = 72/108 (66%)
 Frame = -2

Query: 746 IEKAIVNSNLDLNPSNDGEVIRLTVPQLTSXXXXXXXXXXXXXXXXXKVAIRNIRRDAIX 567
           IEKAIVNS++ + P+NDGEVIRL++PQLTS                 KVA+RNIRRDA+ 
Sbjct: 155 IEKAIVNSDVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKVALRNIRRDALK 214

Query: 566 XXXXXXXXXXXXEDIVKDLSGDLQKVTDDYMKKIEALFKLKEKEMLKV 423
                       ED VKDLS DLQK+TDDY+KK++AL+K KEKE+L V
Sbjct: 215 AYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLTV 262


>ref|XP_003590639.1| Ribosome-recycling factor [Medicago truncatula]
           gi|217072182|gb|ACJ84451.1| unknown [Medicago
           truncatula] gi|217072782|gb|ACJ84751.1| unknown
           [Medicago truncatula] gi|355479687|gb|AES60890.1|
           Ribosome-recycling factor [Medicago truncatula]
          Length = 262

 Score =  105 bits (261), Expect = 3e-20
 Identities = 58/108 (53%), Positives = 72/108 (66%)
 Frame = -2

Query: 746 IEKAIVNSNLDLNPSNDGEVIRLTVPQLTSXXXXXXXXXXXXXXXXXKVAIRNIRRDAIX 567
           IEKAIVNS++ + P+NDGEVIRL++PQLTS                 KVA+RNIRRDA+ 
Sbjct: 155 IEKAIVNSDVGMTPNNDGEVIRLSIPQLTSDRRKELTKIVSKQVEEGKVALRNIRRDALK 214

Query: 566 XXXXXXXXXXXXEDIVKDLSGDLQKVTDDYMKKIEALFKLKEKEMLKV 423
                       ED VKDLS DLQK+TDDY+KK++AL+K KEKE+L V
Sbjct: 215 AYEKLEKDKKLSEDNVKDLSSDLQKLTDDYIKKVDALYKQKEKELLTV 262


>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  104 bits (260), Expect = 3e-20
 Identities = 59/109 (54%), Positives = 72/109 (66%)
 Frame = -2

Query: 749 IIEKAIVNSNLDLNPSNDGEVIRLTVPQLTSXXXXXXXXXXXXXXXXXKVAIRNIRRDAI 570
           +IEKAIV+S+L L P+NDGEVIRL++PQLTS                 KVA+RNIRRDA+
Sbjct: 166 VIEKAIVSSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDAL 225

Query: 569 XXXXXXXXXXXXXEDIVKDLSGDLQKVTDDYMKKIEALFKLKEKEMLKV 423
                        ED VKDLS DLQK+ D+YMKKIE ++K KEKE+LKV
Sbjct: 226 KAYEKLEKDKKLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 274


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