BLASTX nr result

ID: Papaver23_contig00002541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002541
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|1...   114   1e-23
emb|CBI17057.3| unnamed protein product [Vitis vinifera]              112   6e-23
ref|XP_002266030.1| PREDICTED: 60S acidic ribosomal protein P2B ...   111   7e-23
gb|AAL91663.1| 60s acidic ribosomal protein [Prunus dulcis] gi|1...   110   2e-22
gb|ABK93470.1| unknown [Populus trichocarpa]                          108   5e-22

>ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|118484510|gb|ABK94130.1|
           unknown [Populus trichocarpa]
           gi|118485202|gb|ABK94462.1| unknown [Populus
           trichocarpa] gi|118487376|gb|ABK95516.1| unknown
           [Populus trichocarpa] gi|118488119|gb|ABK95879.1|
           unknown [Populus trichocarpa]
           gi|222850071|gb|EEE87618.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score =  114 bits (285), Expect = 1e-23
 Identities = 65/113 (57%), Positives = 69/113 (61%)
 Frame = -2

Query: 532 MKVIAAYLLLVLGGNTAPTAEDIKGVLGSVGADCDDSRIELLLTQVKGKDITELIASGRE 353
           MKV+AAYLL VLGGNT PTAED+K +LGSVGAD DD RIELLL+ VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKNILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 352 KLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 194
           KLAS                                      SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVSAGAAPAAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 113


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  112 bits (279), Expect = 6e-23
 Identities = 64/114 (56%), Positives = 70/114 (61%)
 Frame = -2

Query: 535 EMKVIAAYLLLVLGGNTAPTAEDIKGVLGSVGADCDDSRIELLLTQVKGKDITELIASGR 356
           +MKVIAAYLL VLGGNT P+AED+K +LGSVGA+ DD RIELLL +VKGKDITELIASGR
Sbjct: 32  KMKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGR 91

Query: 355 EKLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 194
           EKLAS                                      SDDDMGFSLFD
Sbjct: 92  EKLASVPSGGGAAVAVAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 145


>ref|XP_002266030.1| PREDICTED: 60S acidic ribosomal protein P2B isoform 1 [Vitis
           vinifera] gi|147767214|emb|CAN73396.1| hypothetical
           protein VITISV_003816 [Vitis vinifera]
           gi|147782772|emb|CAN65595.1| hypothetical protein
           VITISV_030546 [Vitis vinifera]
          Length = 113

 Score =  111 bits (278), Expect = 7e-23
 Identities = 64/113 (56%), Positives = 69/113 (61%)
 Frame = -2

Query: 532 MKVIAAYLLLVLGGNTAPTAEDIKGVLGSVGADCDDSRIELLLTQVKGKDITELIASGRE 353
           MKVIAAYLL VLGGNT P+AED+K +LGSVGA+ DD RIELLL +VKGKDITELIASGRE
Sbjct: 1   MKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGRE 60

Query: 352 KLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 194
           KLAS                                      SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGAAVAVAAPGGGGAAAPAAAEPKKEEKVEEKEESDDDMGFSLFD 113


>gb|AAL91663.1| 60s acidic ribosomal protein [Prunus dulcis]
           gi|111013714|gb|ABH03379.1| 60S acidic ribosomal protein
           [Prunus dulcis]
          Length = 113

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/113 (53%), Positives = 70/113 (61%)
 Frame = -2

Query: 532 MKVIAAYLLLVLGGNTAPTAEDIKGVLGSVGADCDDSRIELLLTQVKGKDITELIASGRE 353
           MKV+AAYLL VLGGNT P+AED+K +LGSVGA+ DD RI+LLL++VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTTPSAEDLKDILGSVGAETDDDRIQLLLSEVKGKDITELIASGRE 60

Query: 352 KLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 194
           KLAS                                      +DDDMGFSLFD
Sbjct: 61  KLASVPSGGGAVAVAAPGAGAGAAAPAAAEPKKEEKVEEKEDTDDDMGFSLFD 113


>gb|ABK93470.1| unknown [Populus trichocarpa]
          Length = 114

 Score =  108 bits (271), Expect = 5e-22
 Identities = 65/114 (57%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
 Frame = -2

Query: 532 MKVIAAYLLLVLGGNTAPTAEDIKGVLGSVGADCDDSRIELLLTQVKGKDITELIASGRE 353
           MKV+AAYLL VLGGNT PTAED+K +LGSVGAD DD RIELLL+ VKGKDITELIASGRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPTAEDLKHILGSVGADADDDRIELLLSSVKGKDITELIASGRE 60

Query: 352 KLAS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFSLFD 194
           KLAS                                       SDDDMGFSLFD
Sbjct: 61  KLASVPSGGGVAVASGGAPAAASGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114


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