BLASTX nr result

ID: Papaver23_contig00002033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002033
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor...   235   4e-60
emb|CBI36976.3| unnamed protein product [Vitis vinifera]              233   1e-59
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor...   233   1e-59
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor...   233   2e-59
ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Med...   233   2e-59

>ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Cucumis sativus]
           gi|449515243|ref|XP_004164659.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           [Cucumis sativus]
          Length = 732

 Score =  235 bits (599), Expect = 4e-60
 Identities = 107/116 (92%), Positives = 114/116 (98%)
 Frame = +3

Query: 3   RDYYINIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 182
           R+YY+NIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT
Sbjct: 617 REYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 676

Query: 183 SRNFIRTVTDVRGEWLVDIAPHYYDLENFPQCEAKRVLERLYQKREKDKENSKNKK 350
           SRNFIRTVTD+RGEWLVDIA HYYDLENFPQCEAKRVLERLY+KREKD+E S+N+K
Sbjct: 677 SRNFIRTVTDIRGEWLVDIASHYYDLENFPQCEAKRVLERLYKKREKDREESRNRK 732


>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  233 bits (595), Expect = 1e-59
 Identities = 106/116 (91%), Positives = 113/116 (97%)
 Frame = +3

Query: 3   RDYYINIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 182
           RDYYINIRKAML+GYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT
Sbjct: 572 RDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 631

Query: 183 SRNFIRTVTDVRGEWLVDIAPHYYDLENFPQCEAKRVLERLYQKREKDKENSKNKK 350
           SRNFIRTVTDVRGEWLVD+APHYYDL NFP CEAKRVLE+LY+KREKD+E S+N+K
Sbjct: 632 SRNFIRTVTDVRGEWLVDVAPHYYDLANFPNCEAKRVLEKLYKKREKDREESRNRK 687


>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
           hypothetical protein VITISV_036050 [Vitis vinifera]
          Length = 728

 Score =  233 bits (595), Expect = 1e-59
 Identities = 106/116 (91%), Positives = 113/116 (97%)
 Frame = +3

Query: 3   RDYYINIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 182
           RDYYINIRKAML+GYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT
Sbjct: 613 RDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 672

Query: 183 SRNFIRTVTDVRGEWLVDIAPHYYDLENFPQCEAKRVLERLYQKREKDKENSKNKK 350
           SRNFIRTVTDVRGEWLVD+APHYYDL NFP CEAKRVLE+LY+KREKD+E S+N+K
Sbjct: 673 SRNFIRTVTDVRGEWLVDVAPHYYDLANFPNCEAKRVLEKLYKKREKDREESRNRK 728


>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Glycine max]
          Length = 722

 Score =  233 bits (593), Expect = 2e-59
 Identities = 104/116 (89%), Positives = 114/116 (98%)
 Frame = +3

Query: 3   RDYYINIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 182
           RDYY+NIRKAML+GYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT
Sbjct: 607 RDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 666

Query: 183 SRNFIRTVTDVRGEWLVDIAPHYYDLENFPQCEAKRVLERLYQKREKDKENSKNKK 350
           SRNFIRTVTD+RGEWLVD+APHYYDL NFPQCEAKRVLERLY+KREK+KE ++++K
Sbjct: 667 SRNFIRTVTDIRGEWLVDVAPHYYDLSNFPQCEAKRVLERLYKKREKEKEEARSRK 722


>ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Medicago truncatula]
           gi|355480419|gb|AES61622.1| ATP-dependent RNA
           helicase-like protein [Medicago truncatula]
          Length = 721

 Score =  233 bits (593), Expect = 2e-59
 Identities = 104/116 (89%), Positives = 114/116 (98%)
 Frame = +3

Query: 3   RDYYINIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 182
           RDYY+NIRKAML+GYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT
Sbjct: 606 RDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLT 665

Query: 183 SRNFIRTVTDVRGEWLVDIAPHYYDLENFPQCEAKRVLERLYQKREKDKENSKNKK 350
           SRNFIRTVTD+RGEWLVDIAPHYYDL NFPQCEAKRVLE+LY+KREK+K+ ++N+K
Sbjct: 666 SRNFIRTVTDIRGEWLVDIAPHYYDLSNFPQCEAKRVLEKLYKKREKEKDEARNRK 721


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