BLASTX nr result

ID: Papaver23_contig00002024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00002024
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...    49   3e-07
ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [...    48   7e-06

>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
            vinifera] gi|147833478|emb|CAN75185.1| hypothetical
            protein VITISV_001912 [Vitis vinifera]
            gi|298205231|emb|CBI17290.3| unnamed protein product
            [Vitis vinifera]
          Length = 152

 Score = 49.3 bits (116), Expect(2) = 3e-07
 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 26/87 (29%)
 Frame = -1

Query: 1231 SKLGSLARQNLS---ASNGQGSLASMYNAVRCXXXXXXXXXXXSKLFVG----------- 1094
            ++ G+L RQ++S   AS GQGS+ ++ N++RC            KLF+G           
Sbjct: 5    NRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSA--------KLFIGGLSYGTDDQSL 56

Query: 1093 ------------ARVITDRDTGRSRGF 1049
                        ARVITDRDTGRSRGF
Sbjct: 57   KDAFSSFGDVVEARVITDRDTGRSRGF 83



 Score = 32.7 bits (73), Expect(2) = 3e-07
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -3

Query: 926 DLGGRNIRVSYANERPP 876
           +L GRNIRVSYANER P
Sbjct: 105 ELNGRNIRVSYANERTP 121


>ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
            gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding
            protein, putative [Ricinus communis]
          Length = 134

 Score = 47.8 bits (112), Expect(2) = 7e-06
 Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 23/84 (27%)
 Frame = -1

Query: 1231 SKLGSLARQNLSASNGQGSLASMYNAVRCXXXXXXXXXXXSKLFVG-------------- 1094
            +K+GSL RQ++ A NG+  ++SM N++RC            KLF+G              
Sbjct: 5    NKIGSLVRQSV-AQNGKVPVSSMLNSIRCMSSS--------KLFIGGLSYGTNDDSLKDA 55

Query: 1093 ---------ARVITDRDTGRSRGF 1049
                     ARVITDRDTGRSRGF
Sbjct: 56   FSGFGDVVTARVITDRDTGRSRGF 79



 Score = 29.6 bits (65), Expect(2) = 7e-06
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -3

Query: 926 DLGGRNIRVSYANERPP 876
           +L GRNIRVSYA ER P
Sbjct: 101 ELHGRNIRVSYATERAP 117


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