BLASTX nr result
ID: Papaver23_contig00002024
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00002024 (1234 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ... 49 3e-07 ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [... 48 7e-06 >ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis vinifera] gi|147833478|emb|CAN75185.1| hypothetical protein VITISV_001912 [Vitis vinifera] gi|298205231|emb|CBI17290.3| unnamed protein product [Vitis vinifera] Length = 152 Score = 49.3 bits (116), Expect(2) = 3e-07 Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 26/87 (29%) Frame = -1 Query: 1231 SKLGSLARQNLS---ASNGQGSLASMYNAVRCXXXXXXXXXXXSKLFVG----------- 1094 ++ G+L RQ++S AS GQGS+ ++ N++RC KLF+G Sbjct: 5 NRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSA--------KLFIGGLSYGTDDQSL 56 Query: 1093 ------------ARVITDRDTGRSRGF 1049 ARVITDRDTGRSRGF Sbjct: 57 KDAFSSFGDVVEARVITDRDTGRSRGF 83 Score = 32.7 bits (73), Expect(2) = 3e-07 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -3 Query: 926 DLGGRNIRVSYANERPP 876 +L GRNIRVSYANER P Sbjct: 105 ELNGRNIRVSYANERTP 121 >ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis] gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis] Length = 134 Score = 47.8 bits (112), Expect(2) = 7e-06 Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 23/84 (27%) Frame = -1 Query: 1231 SKLGSLARQNLSASNGQGSLASMYNAVRCXXXXXXXXXXXSKLFVG-------------- 1094 +K+GSL RQ++ A NG+ ++SM N++RC KLF+G Sbjct: 5 NKIGSLVRQSV-AQNGKVPVSSMLNSIRCMSSS--------KLFIGGLSYGTNDDSLKDA 55 Query: 1093 ---------ARVITDRDTGRSRGF 1049 ARVITDRDTGRSRGF Sbjct: 56 FSGFGDVVTARVITDRDTGRSRGF 79 Score = 29.6 bits (65), Expect(2) = 7e-06 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = -3 Query: 926 DLGGRNIRVSYANERPP 876 +L GRNIRVSYA ER P Sbjct: 101 ELHGRNIRVSYATERAP 117