BLASTX nr result

ID: Papaver23_contig00001978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001978
         (1435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifo...   161   5e-37
gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifo...   160   1e-36
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...   159   1e-36
ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...   159   2e-36
ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-36

>gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
          Length = 411

 Score =  161 bits (407), Expect = 5e-37
 Identities = 77/102 (75%), Positives = 84/102 (82%)
 Frame = +3

Query: 1098 RFPAYGLLSGRKPEDNRAGGGGRAQDSLTSRKRNQNDFALWKAAKPGEISWESPWGPGRP 1277
            +F  YGLLS RK EDNRAG     + S+  RKRN  DFALWK+AKPGEISW SPWG GRP
Sbjct: 54   KFERYGLLSNRKLEDNRAG----ERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRP 109

Query: 1278 GWHIECSAMSDRYLTSSFDIHGGGMDLIFPYHENELAQSCAA 1403
            GWHIECSAMS +YLT SFDIHGGG+DLIFP+HENELAQSCAA
Sbjct: 110  GWHIECSAMSAKYLTYSFDIHGGGIDLIFPHHENELAQSCAA 151



 Score = 94.0 bits (232), Expect = 9e-17
 Identities = 60/136 (44%), Positives = 80/136 (58%), Gaps = 7/136 (5%)
 Frame = +2

Query: 2   FVNTNNEKMSKSCGNFSTIREITNLYHPLVWRYLMMSMHYLSVSPVNYSQEQLEFASEYV 181
           FVN N EKMSKS GN+ TIR++T+ YHPL  RY ++SM+Y   SPVN+S  Q + AS+ V
Sbjct: 165 FVNINGEKMSKSTGNYFTIRQVTDRYHPLAVRYFLLSMNY--GSPVNFSLYQTDLASDAV 222

Query: 182 FYLYKTSLDCEKALFSFREKNPVIAKCKNIR----LTLEAQKCIDKLMNDFYAKMSDDFR 349
           + +Y+T LDC  AL  F+E     AK  + +    LTL       +L+     +MSDD  
Sbjct: 223 YRIYQTLLDCSDALKPFQENVNENAKASSKKPVNLLTL-------RLLMILRKRMSDDLH 275

Query: 350 TPDILNAA---ALKDI 388
             DIL  +   ALK I
Sbjct: 276 IADILKGSLQEALKSI 291



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 45/92 (48%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
 Frame = +1

Query: 658 SLAEMEKEVKLVLDTLGLMSSSSYSEVLEQLKAKALTRANLTEEDVLQQIELRIQATKDQ 837
           SL E+E E++ VL+ LGL+S + YSEVL QLK KAL RA +TE+DV Q IE R  A K++
Sbjct: 312 SLTELEAEIRYVLEVLGLLSPAPYSEVLHQLKEKALLRAEMTEDDVSQLIEERAMARKNK 371

Query: 838 GIFKV*P--NQARLEGIFLVDLDHETQWRRCI 927
              K      Q   +GI L+DL   T WR C+
Sbjct: 372 EFLKSDEIRRQLTAKGISLMDLPTGTTWRPCV 403


>gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
          Length = 411

 Score =  160 bits (404), Expect = 1e-36
 Identities = 76/102 (74%), Positives = 84/102 (82%)
 Frame = +3

Query: 1098 RFPAYGLLSGRKPEDNRAGGGGRAQDSLTSRKRNQNDFALWKAAKPGEISWESPWGPGRP 1277
            +F  YGLLS RK EDNRAG     + S+  RKRN  DFALWK+AKPGEISW SPWG GRP
Sbjct: 54   KFERYGLLSNRKLEDNRAG----ERVSVDHRKRNPADFALWKSAKPGEISWPSPWGNGRP 109

Query: 1278 GWHIECSAMSDRYLTSSFDIHGGGMDLIFPYHENELAQSCAA 1403
            GWHIECSAMS +YLT +FDIHGGG+DLIFP+HENELAQSCAA
Sbjct: 110  GWHIECSAMSAKYLTYAFDIHGGGIDLIFPHHENELAQSCAA 151



 Score = 93.6 bits (231), Expect = 1e-16
 Identities = 59/136 (43%), Positives = 80/136 (58%), Gaps = 7/136 (5%)
 Frame = +2

Query: 2   FVNTNNEKMSKSCGNFSTIREITNLYHPLVWRYLMMSMHYLSVSPVNYSQEQLEFASEYV 181
           FVN N EKMSKS GN+ TIR++T+ YHPL  RY ++SM+Y   SPVN+S  Q + AS+ +
Sbjct: 165 FVNINGEKMSKSTGNYFTIRQVTDRYHPLAVRYFLLSMNY--GSPVNFSLYQTDLASDAI 222

Query: 182 FYLYKTSLDCEKALFSFREKNPVIAKCKNIR----LTLEAQKCIDKLMNDFYAKMSDDFR 349
           + +Y+T LDC  AL  F+E     AK  + +    LTL       +L+     +MSDD  
Sbjct: 223 YRIYQTLLDCSDALKPFQENVNENAKASSKKPVNLLTL-------RLLMILRKRMSDDLH 275

Query: 350 TPDILNAA---ALKDI 388
             DIL  +   ALK I
Sbjct: 276 IADILKGSLQEALKSI 291



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 45/92 (48%), Positives = 59/92 (64%), Gaps = 2/92 (2%)
 Frame = +1

Query: 658 SLAEMEKEVKLVLDTLGLMSSSSYSEVLEQLKAKALTRANLTEEDVLQQIELRIQATKDQ 837
           SL E+E E++ VL+ LGL+S + YSEVL+QLK KAL RA +TE+DV Q IE R  A K++
Sbjct: 312 SLTELEAEIRYVLEVLGLLSPAPYSEVLDQLKEKALLRAEMTEDDVSQLIEERAMARKNK 371

Query: 838 GIFKV*P--NQARLEGIFLVDLDHETQWRRCI 927
              K      Q   +GI L+DL   T WR C+
Sbjct: 372 EFLKSDEIRRQLTAKGISLMDLPTGTTWRPCV 403


>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
            gi|297735988|emb|CBI23962.3| unnamed protein product
            [Vitis vinifera]
          Length = 513

 Score =  159 bits (403), Expect = 1e-36
 Identities = 75/100 (75%), Positives = 83/100 (83%)
 Frame = +3

Query: 1104 PAYGLLSGRKPEDNRAGGGGRAQDSLTSRKRNQNDFALWKAAKPGEISWESPWGPGRPGW 1283
            P YG LSGRK E+NRAG     + ++ SRKRN  DFALWKAAKPGE SW+SPWGPGRPGW
Sbjct: 154  PNYGRLSGRKLENNRAG----ERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGW 209

Query: 1284 HIECSAMSDRYLTSSFDIHGGGMDLIFPYHENELAQSCAA 1403
            HIECSAMS  YLT  FDIHGGG+DLIFP+HENE+AQSCAA
Sbjct: 210  HIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQSCAA 249



 Score =  127 bits (320), Expect = 6e-27
 Identities = 69/123 (56%), Positives = 80/123 (65%)
 Frame = +2

Query: 5   VNTNNEKMSKSCGNFSTIREITNLYHPLVWRYLMMSMHYLSVSPVNYSQEQLEFASEYVF 184
           V  NNEKMSKS GNF TIR+IT+LYHPL  RY ++  HY   SPVNYS  QLE ASE VF
Sbjct: 264 VTNNNEKMSKSLGNFFTIRQITDLYHPLALRYFLLGTHYR--SPVNYSIAQLEIASEAVF 321

Query: 185 YLYKTSLDCEKALFSFREKNPVIAKCKNIRLTLEAQKCIDKLMNDFYAKMSDDFRTPDIL 364
           Y+Y+T  DCE  L  F+E N      +N+ +   AQ CI  L  DF  KMSDD  TP IL
Sbjct: 322 YIYQTLRDCEDTLSLFQEVNG-----RNVCIAPAAQDCIRTLQTDFQTKMSDDLSTPHIL 376

Query: 365 NAA 373
           NA+
Sbjct: 377 NAS 379



 Score = 78.2 bits (191), Expect(2) = 2e-14
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
 Frame = +1

Query: 643 LSLFLSLAEMEKEVKLVLDTLGLMSSSSYSEVLEQLKAKALTRANLTEEDVLQQIELRIQ 822
           LS   SL ++ KEVK VL  LGL+S+ +YSEVL+QLK KAL RA + E+DVL  IE R  
Sbjct: 404 LSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERAL 463

Query: 823 ATKDQGIFKV*PNQARL--EGIFLVDLDHETQWRRCI 927
           A K++   K    +A L  +GI L+D+  ET WR C+
Sbjct: 464 ARKNKDFSKGDQIRADLASKGIALMDVGKETIWRPCV 500



 Score = 28.5 bits (62), Expect(2) = 2e-14
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = +3

Query: 513 CIHILKNDFYATMLDDLHTQDFLNA 587
           CI  L+ DF   M DDL T   LNA
Sbjct: 354 CIRTLQTDFQTKMSDDLSTPHILNA 378


>ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 576

 Score =  159 bits (402), Expect = 2e-36
 Identities = 75/102 (73%), Positives = 83/102 (81%)
 Frame = +3

Query: 1098 RFPAYGLLSGRKPEDNRAGGGGRAQDSLTSRKRNQNDFALWKAAKPGEISWESPWGPGRP 1277
            +FP YG LSGRK EDNRAG     + S+ SRK+N  DFALWK+AK GE  WESPWGPGRP
Sbjct: 223  KFPEYGQLSGRKLEDNRAG----ERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRP 278

Query: 1278 GWHIECSAMSDRYLTSSFDIHGGGMDLIFPYHENELAQSCAA 1403
            GWHIECSAMS  YL  SFDIHGGGMDL+FP+HENE+AQSCAA
Sbjct: 279  GWHIECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQSCAA 320



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 57/131 (43%), Positives = 73/131 (55%), Gaps = 3/131 (2%)
 Frame = +2

Query: 2   FVNTNNEKMSKSCGNFSTIREITNLYHPLVWRYLMMSMHYLSVSPVNYSQEQLEFASEYV 181
           FV  ++EKMSKS GNF TIR++ +LYHPL  R  ++  HY   SP+NYS   LE AS+ +
Sbjct: 334 FVTIDSEKMSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYR--SPINYSDLLLESASDRI 391

Query: 182 FYLYKTSLDCEKALFSFRE---KNPVIAKCKNIRLTLEAQKCIDKLMNDFYAKMSDDFRT 352
           FY+Y+T  DC   +    E   K P+        L  E    I+K  N F   MSDD  T
Sbjct: 392 FYIYQTLDDCRTVISQEDESSFKGPIAPS-----LVEE----INKFSNVFLTSMSDDIHT 442

Query: 353 PDILNAAALKD 385
           P +L  AAL D
Sbjct: 443 PVVL--AALSD 451



 Score = 62.0 bits (149), Expect(2) = 1e-07
 Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
 Frame = +1

Query: 658 SLAEMEKEVKLVLDTLGLMSSSSYSEVLEQLKAKALTRANLTEEDVLQQIELRIQATKDQ 837
           SLA +EK +  VL  LGLM +S YSE L+QLK KALTRA +T + VLQ+IE R  A K++
Sbjct: 474 SLAALEKIIGNVLSILGLMPAS-YSEALQQLKEKALTRAKMTNDQVLQKIEERNAARKNK 532

Query: 838 GIFKV*PNQARLE--GIFLVDLDHETQWR 918
              K    +  L   GI L+D  + T WR
Sbjct: 533 EYEKSDSIRTDLAAVGISLMDGPNGTTWR 561



 Score = 21.2 bits (43), Expect(2) = 1e-07
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 516 IHILKNDFYATMLDDLHTQDFLNAV 590
           I+   N F  +M DD+HT   L A+
Sbjct: 425 INKFSNVFLTSMSDDIHTPVVLAAL 449


>ref|XP_002315932.1| predicted protein [Populus trichocarpa] gi|222864972|gb|EEF02103.1|
            predicted protein [Populus trichocarpa]
          Length = 532

 Score =  159 bits (401), Expect = 2e-36
 Identities = 74/104 (71%), Positives = 86/104 (82%)
 Frame = +3

Query: 1092 LGRFPAYGLLSGRKPEDNRAGGGGRAQDSLTSRKRNQNDFALWKAAKPGEISWESPWGPG 1271
            + + P YG LSG++ E+NRAG     + ++ SRKRN  DFALWKAAKPGE SWESPWGPG
Sbjct: 150  VNKSPNYGQLSGQRLENNRAG----ERVAVDSRKRNPADFALWKAAKPGEPSWESPWGPG 205

Query: 1272 RPGWHIECSAMSDRYLTSSFDIHGGGMDLIFPYHENELAQSCAA 1403
            RPGWHIECSAMS +YLT  FDIHGGG+DLIFP+HENE+AQSCAA
Sbjct: 206  RPGWHIECSAMSAQYLTFKFDIHGGGIDLIFPHHENEIAQSCAA 249



 Score =  120 bits (300), Expect = 1e-24
 Identities = 64/126 (50%), Positives = 79/126 (62%), Gaps = 3/126 (2%)
 Frame = +2

Query: 5   VNTNNEKMSKSCGNFSTIREITNLYHPLVWRYLMMSMHYLSVSPVNYSQEQLEFASEYVF 184
           V  NNEKMSKS GNF TIR+IT  YHPL  R+ ++S HY   SP+NYS  QLE +S+ VF
Sbjct: 264 VTNNNEKMSKSLGNFFTIRQITERYHPLALRHFLISAHYR--SPLNYSVSQLESSSDAVF 321

Query: 185 YLYKTSLDCEKALFSFRE---KNPVIAKCKNIRLTLEAQKCIDKLMNDFYAKMSDDFRTP 355
           Y+Y+T  DCE AL  F+E   K         + +T +AQKCI +L  DF  KMSDD  T 
Sbjct: 322 YIYQTLQDCEDALLPFQEGSLKEGAGQNANLVAITADAQKCISRLHEDFETKMSDDLNTS 381

Query: 356 DILNAA 373
            +L  A
Sbjct: 382 PLLTGA 387



 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 66/183 (36%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
 Frame = +1

Query: 427 CEEALIPFRE---KNPLVPKCITVRLTPEAQSASIY*RMISTLQC*MISTLKTS*ML--- 588
           CE+AL+PF+E   K         V +T +AQ      R+    +  M   L TS +L   
Sbjct: 330 CEDALLPFQEGSLKEGAGQNANLVAITADAQKCIS--RLHEDFETKMSDDLNTSPLLTGA 387

Query: 589 ------LLQGNYXXXXXXXXXXXXLSLFLSLAEMEKEVKLVLDTLGLMSSSSYSEVLEQL 750
                 ++ G+             LSL  S+ E++KEV  VL  LGL    + +EVL+QL
Sbjct: 388 FQEALKVVNGSLGMLKKKQQKKQQLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQL 447

Query: 751 KAKALTRANLTEEDVLQQIELRIQATKDQGIFKV*PNQARLE----GIFLVDLDHETQWR 918
           K KAL RA LTE+DV+  IE R  A K Q   K   +Q R +    GI L+D+  ET WR
Sbjct: 448 KGKALKRAGLTEDDVMSLIEDRAVARKSQDFKK--SDQIRTDLSARGIALMDVGKETVWR 505

Query: 919 RCI 927
            C+
Sbjct: 506 PCV 508


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