BLASTX nr result

ID: Papaver23_contig00001948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001948
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   214   1e-53
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   214   1e-53
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   214   2e-53
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              214   2e-53
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   209   6e-52

>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  214 bits (546), Expect = 1e-53
 Identities = 120/225 (53%), Positives = 151/225 (67%), Gaps = 1/225 (0%)
 Frame = +3

Query: 3    ATLKRHTWHRKLLKTRDPIIVSIGWRRYQTIPVYATEDRSKCPRMLNYTPVDMQCLAMFW 182
            A LKRH WH+K+LKTRDPIIVS+GWRRYQT PVYA ED +   RML YTP  M CLAMFW
Sbjct: 815  ARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFW 874

Query: 183  GPLASPNTGIVAVQYLPDKKAAFRILATAVVVDYD-IAKILKKCKRSRTPWKISGKTALI 359
            GPLA PNTGIVAVQ L + +A FRI ATAVVV+++  A+I+KK K    P KI  KTALI
Sbjct: 875  GPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVGYPCKIFKKTALI 934

Query: 360  KDLFRSADEFYRFKDAKLWTESGIPGKVVQATEKTFVDRPQRNVSLLLTERIAECKFKRR 539
            KD+F S  E  RF+ A + T SGI G+V +  ++   ++P+R     + E IA C F+ +
Sbjct: 935  KDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGG-QIKEGIARCTFEDK 993

Query: 540  ICMGDTIFMRVQKEVEVPRFFKPVVPMPGLSDGPEEFPKGRRTVA 674
            I M D +F+R   +VEVP+F+ P+       D   +  KG RTVA
Sbjct: 994  ILMSDIVFLRAWTQVEVPQFYNPLTTALQPRD---QTWKGMRTVA 1035


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  214 bits (546), Expect = 1e-53
 Identities = 120/225 (53%), Positives = 151/225 (67%), Gaps = 1/225 (0%)
 Frame = +3

Query: 3    ATLKRHTWHRKLLKTRDPIIVSIGWRRYQTIPVYATEDRSKCPRMLNYTPVDMQCLAMFW 182
            A LKRH WH+K+LKTRDPIIVS+GWRRYQT PVYA ED +   RML YTP  M CLAMFW
Sbjct: 815  ARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFW 874

Query: 183  GPLASPNTGIVAVQYLPDKKAAFRILATAVVVDYD-IAKILKKCKRSRTPWKISGKTALI 359
            GPLA PNTGIVAVQ L + +A FRI ATAVVV+++  A+I+KK K    P KI  KTALI
Sbjct: 875  GPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVGYPCKIFKKTALI 934

Query: 360  KDLFRSADEFYRFKDAKLWTESGIPGKVVQATEKTFVDRPQRNVSLLLTERIAECKFKRR 539
            KD+F S  E  RF+ A + T SGI G+V +  ++   ++P+R     + E IA C F+ +
Sbjct: 935  KDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGG-QIKEGIARCTFEDK 993

Query: 540  ICMGDTIFMRVQKEVEVPRFFKPVVPMPGLSDGPEEFPKGRRTVA 674
            I M D +F+R   +VEVP+F+ P+       D   +  KG RTVA
Sbjct: 994  ILMSDIVFLRAWTQVEVPQFYNPLTTALQPRD---QTWKGMRTVA 1035


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  214 bits (544), Expect = 2e-53
 Identities = 114/202 (56%), Positives = 144/202 (71%), Gaps = 1/202 (0%)
 Frame = +3

Query: 9    LKRHTWHRKLLKTRDPIIVSIGWRRYQTIPVYATEDRSKCPRMLNYTPVDMQCLAMFWGP 188
            +KRH WH+KLLKTRDPIIVSIGWRRYQTIPVYATED +   RML YT   M CLAMFWGP
Sbjct: 782  IKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGP 841

Query: 189  LASPNTGIVAVQYLPDKKAAFRILATAVVVDYD-IAKILKKCKRSRTPWKISGKTALIKD 365
            LA PNTG+VAVQ L + +A FRI+ATAVV++++  A+++KK K    P KI  KTALIK+
Sbjct: 842  LAPPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKN 901

Query: 366  LFRSADEFYRFKDAKLWTESGIPGKVVQATEKTFVDRPQRNVSLLLTERIAECKFKRRIC 545
            +F S  E  RF+ A + T SGI G+V +A ++   ++P++    L  E IA C F+ RI 
Sbjct: 902  MFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGG-LPREGIARCTFEDRIL 960

Query: 546  MGDTIFMRVQKEVEVPRFFKPV 611
            M D +F+R   EVEVP FF P+
Sbjct: 961  MSDLVFLRAWTEVEVPCFFNPL 982


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  214 bits (544), Expect = 2e-53
 Identities = 114/202 (56%), Positives = 144/202 (71%), Gaps = 1/202 (0%)
 Frame = +3

Query: 9    LKRHTWHRKLLKTRDPIIVSIGWRRYQTIPVYATEDRSKCPRMLNYTPVDMQCLAMFWGP 188
            +KRH WH+KLLKTRDPIIVSIGWRRYQTIPVYATED +   RML YT   M CLAMFWGP
Sbjct: 948  IKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYTKEHMHCLAMFWGP 1007

Query: 189  LASPNTGIVAVQYLPDKKAAFRILATAVVVDYD-IAKILKKCKRSRTPWKISGKTALIKD 365
            LA PNTG+VAVQ L + +A FRI+ATAVV++++  A+++KK K    P KI  KTALIK+
Sbjct: 1008 LAPPNTGVVAVQNLSNNQATFRIIATAVVLEFNHAARLVKKIKLVGEPCKIFKKTALIKN 1067

Query: 366  LFRSADEFYRFKDAKLWTESGIPGKVVQATEKTFVDRPQRNVSLLLTERIAECKFKRRIC 545
            +F S  E  RF+ A + T SGI G+V +A ++   ++P++    L  E IA C F+ RI 
Sbjct: 1068 MFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGG-LPREGIARCTFEDRIL 1126

Query: 546  MGDTIFMRVQKEVEVPRFFKPV 611
            M D +F+R   EVEVP FF P+
Sbjct: 1127 MSDLVFLRAWTEVEVPCFFNPL 1148


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  209 bits (532), Expect = 6e-52
 Identities = 116/226 (51%), Positives = 151/226 (66%), Gaps = 2/226 (0%)
 Frame = +3

Query: 3    ATLKRHTWHRKLLKTRDPIIVSIGWRRYQTIPVYATEDRSKCPRMLNYTPVDMQCLAMFW 182
            A LKRH WH+K+LKTRDPIIVS+GWRRYQT P+YA ED +   RML YTP  M CLAMFW
Sbjct: 819  ARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPIYAIEDSNGRHRMLKYTPEHMHCLAMFW 878

Query: 183  GPLASPNTGIVAVQYLPDKKAAFRILATAVVVDYD-IAKILKKCKRSRTPWKISGKTALI 359
            GPLA PNTG+VA+Q L + +A FRI ATAVV++++  A+I+KK K    P KI  KTALI
Sbjct: 879  GPLAPPNTGVVAIQNLSNNQATFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALI 938

Query: 360  KDLFRSADEFYRFKDAKLWTESGIPGKVVQATEKTFVDRPQRNVSLLLTERIAECKFKRR 539
            KD+F S  E  RF+ A + T SGI G+V +A ++   ++ +R       E IA C F+ +
Sbjct: 939  KDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGG-QTKEGIARCTFEDK 997

Query: 540  ICMGDTIFMRVQKEVEVPRFFKPVVPMPGLSDGPEEFP-KGRRTVA 674
            I M D +F+R   +VEVP+F+ P+      +  P +   KG RTVA
Sbjct: 998  ILMSDIVFLRAWTQVEVPQFYNPLT----TALQPRDMTWKGMRTVA 1039


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