BLASTX nr result

ID: Papaver23_contig00001947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001947
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...    80   2e-13
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...    80   2e-13
ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [S...    79   4e-13
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...    78   6e-13
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...    78   8e-13

>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 58/165 (35%), Positives = 87/165 (52%)
 Frame = +2

Query: 2    KCKRSGTSWKISGKTALIKDLFRSDHEIERFKDAKVRTESGIQGKVKKVSIATEKVFVDR 181
            K K  G   KI  KTALIKD+F SD E+ RF+ A +RT SGI+G+VKKV+   ++   ++
Sbjct: 917  KIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVA---KEEIGNQ 973

Query: 182  LERNVSLLTIRIVECKFKRRICTGDTIFMRVQKEVEVPRYFNPVVPMPGLSDGPGEFPKG 361
             +R    +   I  C F+ +I   D +F+R   +VEVP+++NP+       D   +  KG
Sbjct: 974  PKRKGGQIKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRD---QTWKG 1030

Query: 362  RRKVAFVEGEPSFQDLTIAMKFELDHCNKVEQREFNKHPVLVISK 496
             R VA +  E +     + +    D   K  +R+  K   LVI K
Sbjct: 1031 MRTVAELRREHN-----LPIPVNKDSLYKKIERKPRKFNPLVIPK 1070


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 58/165 (35%), Positives = 87/165 (52%)
 Frame = +2

Query: 2    KCKRSGTSWKISGKTALIKDLFRSDHEIERFKDAKVRTESGIQGKVKKVSIATEKVFVDR 181
            K K  G   KI  KTALIKD+F SD E+ RF+ A +RT SGI+G+VKKV+   ++   ++
Sbjct: 917  KIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVA---KEEIGNQ 973

Query: 182  LERNVSLLTIRIVECKFKRRICTGDTIFMRVQKEVEVPRYFNPVVPMPGLSDGPGEFPKG 361
             +R    +   I  C F+ +I   D +F+R   +VEVP+++NP+       D   +  KG
Sbjct: 974  PKRKGGQIKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRD---QTWKG 1030

Query: 362  RRKVAFVEGEPSFQDLTIAMKFELDHCNKVEQREFNKHPVLVISK 496
             R VA +  E +     + +    D   K  +R+  K   LVI K
Sbjct: 1031 MRTVAELRREHN-----LPIPVNKDSLYKKIERKPRKFNPLVIPK 1070


>ref|XP_002467916.1| hypothetical protein SORBIDRAFT_01g036270 [Sorghum bicolor]
            gi|241921770|gb|EER94914.1| hypothetical protein
            SORBIDRAFT_01g036270 [Sorghum bicolor]
          Length = 1184

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 47/104 (45%), Positives = 59/104 (56%)
 Frame = +2

Query: 2    KCKRSGTSWKISGKTALIKDLFRSDHEIERFKDAKVRTESGIQGKVKKVSIATEKVFVDR 181
            K K +GT  KI  KTALIK +F SD E+ RF+ A +RT SGI+G+VKK +       + R
Sbjct: 930  KIKLTGTPCKIFKKTALIKGMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKIEPGDMLKR 989

Query: 182  LERNVSLLTIRIVECKFKRRICTGDTIFMRVQKEVEVPRYFNPV 313
               N    T  I  C F+ RI   D +F+R    VEVP Y NPV
Sbjct: 990  KGEN----TEGIARCTFEDRILMSDIVFLRAWVNVEVPTYCNPV 1029


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 58/165 (35%), Positives = 84/165 (50%)
 Frame = +2

Query: 2    KCKRSGTSWKISGKTALIKDLFRSDHEIERFKDAKVRTESGIQGKVKKVSIATEKVFVDR 181
            K K  G   KI  KTALIKD+F SD E+ RF+ A +RT SGI+G+VKK   A ++   ++
Sbjct: 921  KIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKK---AAKEEIGNQ 977

Query: 182  LERNVSLLTIRIVECKFKRRICTGDTIFMRVQKEVEVPRYFNPVVPMPGLSDGPGEFPKG 361
             +R        I  C F+ +I   D +F+R   +VEVP+++NP+       D      KG
Sbjct: 978  AKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDMTW---KG 1034

Query: 362  RRKVAFVEGEPSFQDLTIAMKFELDHCNKVEQREFNKHPVLVISK 496
             R VA +  E +     + +    D   K  +R+  K   LVI K
Sbjct: 1035 MRTVAELRREHN-----LPIPVNKDSLYKKIERKPRKFNPLVIPK 1074


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/104 (41%), Positives = 63/104 (60%)
 Frame = +2

Query: 2    KCKRSGTSWKISGKTALIKDLFRSDHEIERFKDAKVRTESGIQGKVKKVSIATEKVFVDR 181
            K K  G   KI  KTALIKD+F SD E+ RF+ A +RT SGI+G+VKK   A ++   ++
Sbjct: 916  KIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKK---AAKEEIGNQ 972

Query: 182  LERNVSLLTIRIVECKFKRRICTGDTIFMRVQKEVEVPRYFNPV 313
             +R        I  C F+ +I   D +F+R   +VEVP+++NP+
Sbjct: 973  AKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPL 1016


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