BLASTX nr result

ID: Papaver23_contig00001913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001913
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273931.1| PREDICTED: transcription initiation factor T...   239   5e-61
ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|1...   239   6e-61
ref|XP_002521322.1| protein with unknown function [Ricinus commu...   237   2e-60
ref|NP_175816.1| transcription initiation factor TFIID subunit D...   233   3e-59
ref|XP_004141702.1| PREDICTED: transcription initiation factor T...   226   4e-57

>ref|XP_002273931.1| PREDICTED: transcription initiation factor TFIID subunit 9B [Vitis
           vinifera] gi|297742999|emb|CBI35866.3| unnamed protein
           product [Vitis vinifera]
          Length = 177

 Score =  239 bits (611), Expect = 5e-61
 Identities = 125/178 (70%), Positives = 138/178 (77%)
 Frame = -3

Query: 764 GDEDLPRDAKIVQTLLKSMGVSEYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAID 585
           GDEDLPRDAKIV++LLKSMGV +YEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAID
Sbjct: 4   GDEDLPRDAKIVKSLLKSMGVDDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAID 63

Query: 584 TDDVKLAIQTKVNFGFSQPPPREVLLELARSRNKMPLPKSITGPGIPLPPDEDTLTSPNY 405
            DDVKLAIQ+KVNF FSQPP REVLLELAR+RNK+PLPKSI GPGIPLPP++DTL SPNY
Sbjct: 64  CDDVKLAIQSKVNFSFSQPPAREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNY 123

Query: 404 QLAIPRRPQTQAXXXXXXXXDVADPNQNSNLXXXXXXXXXXXXXXXXQRVSFPLTGKR 231
           QLAIP++   QA        + ADP+  S                  QRVSFP+  KR
Sbjct: 124 QLAIPKKRTAQAVEETEEDEEGADPSHASQ------EGRTDLPQHTPQRVSFPIGAKR 175


>ref|XP_002299587.1| predicted protein [Populus trichocarpa] gi|118484348|gb|ABK94051.1|
           unknown [Populus trichocarpa]
           gi|222846845|gb|EEE84392.1| predicted protein [Populus
           trichocarpa]
          Length = 175

 Score =  239 bits (610), Expect = 6e-61
 Identities = 122/175 (69%), Positives = 138/175 (78%)
 Frame = -3

Query: 764 GDEDLPRDAKIVQTLLKSMGVSEYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAID 585
           G+ED+PRDAKIV++LLKSMGV +YEPRV+HQFLELWYRYVVDVLTDAQVYSEHA+K AID
Sbjct: 4   GEEDMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKTAID 63

Query: 584 TDDVKLAIQTKVNFGFSQPPPREVLLELARSRNKMPLPKSITGPGIPLPPDEDTLTSPNY 405
            DDVKLAIQ+KVNF FSQPPPREVLLELAR+RNK+PLPKSI GPGIPLPP++DTL SPNY
Sbjct: 64  CDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLISPNY 123

Query: 404 QLAIPRRPQTQAXXXXXXXXDVADPNQNSNLXXXXXXXXXXXXXXXXQRVSFPLT 240
           QLAIP++   QA        + ADPNQ+                   QRVSFPLT
Sbjct: 124 QLAIPKKRTAQAIEETEEDEESADPNQSQE-------QKTDPPQLTPQRVSFPLT 171


>ref|XP_002521322.1| protein with unknown function [Ricinus communis]
           gi|223539400|gb|EEF40990.1| protein with unknown
           function [Ricinus communis]
          Length = 175

 Score =  237 bits (605), Expect = 2e-60
 Identities = 122/175 (69%), Positives = 136/175 (77%)
 Frame = -3

Query: 764 GDEDLPRDAKIVQTLLKSMGVSEYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAID 585
           GDE+LPRDAKIV++LLKSMGV +YEPRVIHQFLELWYRYVVDVLTDAQVYSEHA K AID
Sbjct: 4   GDENLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKSAID 63

Query: 584 TDDVKLAIQTKVNFGFSQPPPREVLLELARSRNKMPLPKSITGPGIPLPPDEDTLTSPNY 405
            DDVKLAIQ+KVNF FSQPPPREVLLELAR+RNK+PLPKSI GPG+PLPP++DTL SPNY
Sbjct: 64  CDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGMPLPPEQDTLISPNY 123

Query: 404 QLAIPRRPQTQAXXXXXXXXDVADPNQNSNLXXXXXXXXXXXXXXXXQRVSFPLT 240
           QLAIP++   QA        + ADPN +                   QRVSFPLT
Sbjct: 124 QLAIPKKQSVQATEETEEDEESADPNSSQE-------PKTDVPQGTPQRVSFPLT 171


>ref|NP_175816.1| transcription initiation factor TFIID subunit D7 [Arabidopsis
           thaliana] gi|4587557|gb|AAD25788.1|AC006577_24 Similar
           to gb|U21858 transcription initiation factor TFIID 31KD
           subunit (TAFII32) from Homo sapiens [Arabidopsis
           thaliana] gi|7638157|gb|AAF65406.1|AF238327_1 putative
           TATA binding protein associated factor 21kDa subunit
           [Arabidopsis thaliana] gi|21593471|gb|AAM65438.1|
           transcriptional activation factor TAFII32, putative
           [Arabidopsis thaliana] gi|39545926|gb|AAR28026.1| TAF9
           [Arabidopsis thaliana] gi|98960943|gb|ABF58955.1|
           At1g54140 [Arabidopsis thaliana]
           gi|332194933|gb|AEE33054.1| transcription initiation
           factor TFIID subunit D7 [Arabidopsis thaliana]
          Length = 183

 Score =  233 bits (595), Expect = 3e-59
 Identities = 117/175 (66%), Positives = 135/175 (77%)
 Frame = -3

Query: 764 GDEDLPRDAKIVQTLLKSMGVSEYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAID 585
           G+ED+PRDAKIV++LLKSMGV +YEPRVIHQFLELWYRYVV+VLTDAQVYSEHASKP ID
Sbjct: 5   GEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNID 64

Query: 584 TDDVKLAIQTKVNFGFSQPPPREVLLELARSRNKMPLPKSITGPGIPLPPDEDTLTSPNY 405
            DDVKLAIQ+KVNF FSQPPPREVLLELA SRNK+PLPKSI GPG+PLPP++DTL SPNY
Sbjct: 65  CDDVKLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPNY 124

Query: 404 QLAIPRRPQTQAXXXXXXXXDVADPNQNSNLXXXXXXXXXXXXXXXXQRVSFPLT 240
           QL IP++  +          ++ DP Q+S                  QRVSFPL+
Sbjct: 125 QLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQTPQRVSFPLS 179


>ref|XP_004141702.1| PREDICTED: transcription initiation factor TFIID subunit 9-like
           [Cucumis sativus] gi|449480520|ref|XP_004155919.1|
           PREDICTED: transcription initiation factor TFIID subunit
           9-like [Cucumis sativus]
          Length = 179

 Score =  226 bits (577), Expect = 4e-57
 Identities = 109/127 (85%), Positives = 119/127 (93%)
 Frame = -3

Query: 764 GDEDLPRDAKIVQTLLKSMGVSEYEPRVIHQFLELWYRYVVDVLTDAQVYSEHASKPAID 585
           GDE+LPRDAKIV+TLLKSMGV +YEPRVIHQFLELWYRYVVDVLTDAQVYSEHA K AID
Sbjct: 4   GDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAID 63

Query: 584 TDDVKLAIQTKVNFGFSQPPPREVLLELARSRNKMPLPKSITGPGIPLPPDEDTLTSPNY 405
            DDVKLAIQ+KVNF FSQPPPREVLLELAR+RNK+PLP+SI GPGI LPPD+DTL SPNY
Sbjct: 64  CDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNY 123

Query: 404 QLAIPRR 384
           QLAIP++
Sbjct: 124 QLAIPKK 130


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