BLASTX nr result

ID: Papaver23_contig00001856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001856
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinu...   553   e-155
ref|XP_002316630.1| predicted protein [Populus trichocarpa] gi|2...   551   e-154
ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like...   548   e-153
ref|XP_002305682.1| predicted protein [Populus trichocarpa] gi|2...   546   e-153
ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like...   545   e-153

>ref|XP_002519025.1| Splicing factor 3B subunit, putative [Ricinus communis]
            gi|223541688|gb|EEF43236.1| Splicing factor 3B subunit,
            putative [Ricinus communis]
          Length = 590

 Score =  553 bits (1425), Expect = e-155
 Identities = 271/358 (75%), Positives = 288/358 (80%), Gaps = 8/358 (2%)
 Frame = +3

Query: 258  DNDSDDN-------AKENSDPHQPLEKVEIEYVTENLEFGDAY-AELKSVFEKFXXXXXX 413
            +N+S DN       A ENSDP + +E+V +EYV E  E  D    E + +FEKF      
Sbjct: 63   NNESSDNDEANGSYANENSDPQKVMEQVVVEYVLEKAELDDGMDEEFRKIFEKFNFTEAA 122

Query: 414  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVSNKKKKLQRRMKIAELKQLC 593
                                                 GG+SNKKKKL RRMKIAELKQ+C
Sbjct: 123  ATEENDTKDESAQNAESKKKVDSDSEEEEQDNQQKEKGGISNKKKKLLRRMKIAELKQIC 182

Query: 594  ARPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIA 773
            +RPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIA
Sbjct: 183  SRPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIA 242

Query: 774  ATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGE 953
            ATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLT+HG+
Sbjct: 243  ATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTHGD 302

Query: 954  LYHEGKEFEVKLREMKPGMLSQDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLN 1133
            LYHEGKEFEVKLREMKPG LSQ+LKE+LGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLN
Sbjct: 303  LYHEGKEFEVKLREMKPGTLSQELKESLGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLN 362

Query: 1134 APIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQLNYEEEPVDRSKHWGDLE 1307
            APIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGV QQEQ NYEEEPVD++KHWGDLE
Sbjct: 363  APIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVYQQEQPNYEEEPVDKNKHWGDLE 420


>ref|XP_002316630.1| predicted protein [Populus trichocarpa] gi|222859695|gb|EEE97242.1|
            predicted protein [Populus trichocarpa]
          Length = 588

 Score =  551 bits (1419), Expect = e-154
 Identities = 268/349 (76%), Positives = 283/349 (81%)
 Frame = +3

Query: 261  NDSDDNAKENSDPHQPLEKVEIEYVTENLEFGDAYAELKSVFEKFXXXXXXXXXXXXXXX 440
            N    +AKEN+DP Q +E+V IEYV E  E  D   E ++VFEKF               
Sbjct: 65   NGDGGDAKENADPQQVMEQVVIEYVPEKAELEDGMDEFRNVFEKFNFLQSAGSEENDKKD 124

Query: 441  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVSNKKKKLQRRMKIAELKQLCARPDVVEVW 620
                                         GVSNKKKKLQRRMKIA+LKQ+C+RPDVVEVW
Sbjct: 125  ESIQNADAKKKTDSDSDSEEEEDNEQKEKGVSNKKKKLQRRMKIADLKQICSRPDVVEVW 184

Query: 621  DATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 800
            DAT+ADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 185  DATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 244

Query: 801  AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGELYHEGKEFE 980
            AYIEKED KKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLT HG+LYHEGKEFE
Sbjct: 245  AYIEKEDGKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTMHGDLYHEGKEFE 304

Query: 981  VKLREMKPGMLSQDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 1160
            VKLREMKPG LSQ+LKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF
Sbjct: 305  VKLREMKPGSLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 364

Query: 1161 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQLNYEEEPVDRSKHWGDLE 1307
            GYH GGWGKPPVDEYGRPLYGDVFGVQ Q+Q NYEEEPVD++KHWGDLE
Sbjct: 365  GYHAGGWGKPPVDEYGRPLYGDVFGVQIQDQPNYEEEPVDKTKHWGDLE 413


>ref|XP_004152814.1| PREDICTED: splicing factor 3B subunit 2-like [Cucumis sativus]
            gi|449515207|ref|XP_004164641.1| PREDICTED: splicing
            factor 3B subunit 2-like [Cucumis sativus]
          Length = 580

 Score =  548 bits (1412), Expect = e-153
 Identities = 272/352 (77%), Positives = 289/352 (82%), Gaps = 2/352 (0%)
 Frame = +3

Query: 258  DND-SDDNAKENSDPHQPLEKVEIEYVTENLEFGDAYAE-LKSVFEKFXXXXXXXXXXXX 431
            D+D S D+ KEN DP Q +EKVEIEY+ E  E  D+  E  + VFEKF            
Sbjct: 60   DSDASGDDTKENDDPLQVVEKVEIEYIPEKAELDDSLDEDFRKVFEKFSFSEVAGAEENE 119

Query: 432  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVSNKKKKLQRRMKIAELKQLCARPDVV 611
                                            G+SNKKKKLQRRMKIAELKQ+C+RPDVV
Sbjct: 120  DKDESAQNATSKKSDSDSDDEEHDNQQKEK--GLSNKKKKLQRRMKIAELKQICSRPDVV 177

Query: 612  EVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 791
            E+WDATAADPKLLV+LKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK
Sbjct: 178  EIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEK 237

Query: 792  IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGELYHEGK 971
            IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLT+ G+LY+EGK
Sbjct: 238  IRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGK 297

Query: 972  EFEVKLREMKPGMLSQDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPG 1151
            EFEVKLREMKPGMLSQ+LKEALGMPEGAPPPWLINMQRYGPPPSYP LKIPGLNAPIPPG
Sbjct: 298  EFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPG 357

Query: 1152 ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQLNYEEEPVDRSKHWGDLE 1307
            ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQ NYEEEPVD++KHWGDLE
Sbjct: 358  ASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQANYEEEPVDKTKHWGDLE 409


>ref|XP_002305682.1| predicted protein [Populus trichocarpa] gi|222848646|gb|EEE86193.1|
            predicted protein [Populus trichocarpa]
          Length = 585

 Score =  546 bits (1408), Expect = e-153
 Identities = 267/349 (76%), Positives = 285/349 (81%)
 Frame = +3

Query: 261  NDSDDNAKENSDPHQPLEKVEIEYVTENLEFGDAYAELKSVFEKFXXXXXXXXXXXXXXX 440
            ND  D+AKEN+DP Q +++V IEYV E  E  D   E +++FEKF               
Sbjct: 62   NDDGDDAKENADPQQVVDQVVIEYVPEKAELEDGMDEFRNIFEKFNLLQSAGSEENDKKD 121

Query: 441  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVSNKKKKLQRRMKIAELKQLCARPDVVEVW 620
                                        G VSNKKKKLQRRMKIA LKQ+C+RPDVVEVW
Sbjct: 122  ESVQNAEAKKKADSDSDDEEQENEQKEKG-VSNKKKKLQRRMKIANLKQICSRPDVVEVW 180

Query: 621  DATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 800
            DAT+ADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ
Sbjct: 181  DATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 240

Query: 801  AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGELYHEGKEFE 980
            AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLT+ G+LYHEGKEFE
Sbjct: 241  AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTTLGDLYHEGKEFE 300

Query: 981  VKLREMKPGMLSQDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 1160
            VKLREMKPG LSQ+LKE+LGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF
Sbjct: 301  VKLREMKPGSLSQELKESLGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 360

Query: 1161 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQLNYEEEPVDRSKHWGDLE 1307
            GYH GGWGKPPVDEYGRPLYGDVFGVQ Q+Q NYEEEPVD++KHWGDLE
Sbjct: 361  GYHAGGWGKPPVDEYGRPLYGDVFGVQIQDQPNYEEEPVDKTKHWGDLE 409


>ref|XP_003541544.1| PREDICTED: splicing factor 3B subunit 2-like [Glycine max]
          Length = 577

 Score =  545 bits (1405), Expect = e-153
 Identities = 268/349 (76%), Positives = 284/349 (81%), Gaps = 1/349 (0%)
 Frame = +3

Query: 264  DSDDNAKENSDPHQPLEKVEIEYVTENLEFGDAY-AELKSVFEKFXXXXXXXXXXXXXXX 440
            +  D+A EN+DP Q +E+VEIEYV E  E  +    E + +FEKF               
Sbjct: 55   EDGDDATENTDPQQVVEQVEIEYVPERAELDEGLDEEFRKIFEKFSFGEVTGSEDNDKKD 114

Query: 441  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVSNKKKKLQRRMKIAELKQLCARPDVVEVW 620
                                        G +SNKKKKLQRRMKIAELKQ+C+RPDVVEVW
Sbjct: 115  ESVENATTNKKADSDSEEEENDNEQKEKG-ISNKKKKLQRRMKIAELKQICSRPDVVEVW 173

Query: 621  DATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQ 800
            DATA+DPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEK PFQLPDFIAATGIEKIRQ
Sbjct: 174  DATASDPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKLPFQLPDFIAATGIEKIRQ 233

Query: 801  AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSHGELYHEGKEFE 980
            AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTS GELYHEGKEFE
Sbjct: 234  AYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTSLGELYHEGKEFE 293

Query: 981  VKLREMKPGMLSQDLKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 1160
            VKLREMKPGMLS +LKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF
Sbjct: 294  VKLREMKPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASF 353

Query: 1161 GYHPGGWGKPPVDEYGRPLYGDVFGVQQQEQLNYEEEPVDRSKHWGDLE 1307
            GYHPGGWGKPPVDEYGRPLYGDVFGV QQ+Q NYEEEPVD++KHWGDLE
Sbjct: 354  GYHPGGWGKPPVDEYGRPLYGDVFGVHQQDQPNYEEEPVDKTKHWGDLE 402


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