BLASTX nr result

ID: Papaver23_contig00001807 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001807
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   308   e-107
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   302   e-105
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   304   e-105
ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation spec...   299   e-103
ref|XP_002321911.1| predicted protein [Populus trichocarpa] gi|1...   301   e-103

>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  308 bits (788), Expect(2) = e-107
 Identities = 145/149 (97%), Positives = 148/149 (99%)
 Frame = +3

Query: 315 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLSSKLAANSTALQPD 494
           VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLSSKLAANS ALQPD
Sbjct: 50  VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPD 109

Query: 495 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 674
           WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPL
Sbjct: 110 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPL 169

Query: 675 FELYDNVQRYGPVISTIPQQLSRFQFNMI 761
           FELYDNVQRYGPVISTIPQQLSRFQFNM+
Sbjct: 170 FELYDNVQRYGPVISTIPQQLSRFQFNMM 198



 Score =  109 bits (272), Expect(2) = e-107
 Identities = 54/55 (98%), Positives = 55/55 (100%)
 Frame = +1

Query: 103 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVSDRLARMKVNYMKEGMRTSVEAILL 267
           MVTSPVVNTYPLSSYTFGTKEPKMEKDTSV+DRLARMKVNYMKEGMRTSVEAILL
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 55


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  302 bits (774), Expect(2) = e-105
 Identities = 141/149 (94%), Positives = 146/149 (97%)
 Frame = +3

Query: 315 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLSSKLAANSTALQPD 494
           VEAILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKL+SKL ANS +LQPD
Sbjct: 50  VEAILLVQEHKHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPD 109

Query: 495 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 674
           WQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPL
Sbjct: 110 WQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPL 169

Query: 675 FELYDNVQRYGPVISTIPQQLSRFQFNMI 761
           FELYDNVQRYGPVISTIPQQLSRFQFNMI
Sbjct: 170 FELYDNVQRYGPVISTIPQQLSRFQFNMI 198



 Score =  108 bits (269), Expect(2) = e-105
 Identities = 53/55 (96%), Positives = 55/55 (100%)
 Frame = +1

Query: 103 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVSDRLARMKVNYMKEGMRTSVEAILL 267
           MVTSPVVNTYPLSSYTFGTKEPK+EKDTSV+DRLARMKVNYMKEGMRTSVEAILL
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILL 55


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  304 bits (779), Expect(2) = e-105
 Identities = 144/149 (96%), Positives = 146/149 (97%)
 Frame = +3

Query: 315 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLSSKLAANSTALQPD 494
           VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKL+SKL ANS AL PD
Sbjct: 50  VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD 109

Query: 495 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 674
           WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL
Sbjct: 110 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 169

Query: 675 FELYDNVQRYGPVISTIPQQLSRFQFNMI 761
           FELYDNVQRYGPVISTIPQQLSRFQFNMI
Sbjct: 170 FELYDNVQRYGPVISTIPQQLSRFQFNMI 198



 Score =  104 bits (259), Expect(2) = e-105
 Identities = 52/55 (94%), Positives = 53/55 (96%)
 Frame = +1

Query: 103 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVSDRLARMKVNYMKEGMRTSVEAILL 267
           MV S VVNTYPLSSYTFGTKEPKMEKDTSV+DRLARMKVNYMKEGMRTSVEAILL
Sbjct: 1   MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 55


>ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 [Vitis vinifera] gi|147788664|emb|CAN61008.1|
           hypothetical protein VITISV_016616 [Vitis vinifera]
           gi|302143896|emb|CBI22757.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  299 bits (765), Expect(2) = e-103
 Identities = 140/149 (93%), Positives = 144/149 (96%)
 Frame = +3

Query: 315 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLSSKLAANSTALQPD 494
           V+AILLVQEH HPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKLSSKLAANS  LQPD
Sbjct: 50  VDAILLVQEHTHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPD 109

Query: 495 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 674
           WQIGECVAIWWRPNFET+MYPYCPPHITKPKECKKLF+VHLSEREYFAVPKNLKLLAVPL
Sbjct: 110 WQIGECVAIWWRPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPL 169

Query: 675 FELYDNVQRYGPVISTIPQQLSRFQFNMI 761
           FELYDNVQRYGPVISTIP  LSRFQFNMI
Sbjct: 170 FELYDNVQRYGPVISTIPLHLSRFQFNMI 198



 Score =  104 bits (260), Expect(2) = e-103
 Identities = 50/55 (90%), Positives = 55/55 (100%)
 Frame = +1

Query: 103 MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVSDRLARMKVNYMKEGMRTSVEAILL 267
           M+TSPVVNTYPLSSYTFGTKEPKMEKDTSV+DRLARM+VNYMKEGMRT+V+AILL
Sbjct: 1   MLTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMRVNYMKEGMRTTVDAILL 55


>ref|XP_002321911.1| predicted protein [Populus trichocarpa] gi|118487488|gb|ABK95571.1|
           unknown [Populus trichocarpa]
           gi|222868907|gb|EEF06038.1| predicted protein [Populus
           trichocarpa]
          Length = 202

 Score =  301 bits (771), Expect(2) = e-103
 Identities = 142/149 (95%), Positives = 145/149 (97%)
 Frame = +3

Query: 315 VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLSSKLAANSTALQPD 494
           VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEI+GLKRKL+SKL ANS AL PD
Sbjct: 52  VEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPD 111

Query: 495 WQIGECVAIWWRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPL 674
           WQIGECVA WWRPNFETIMYPYCPPHITKPKECKKL+LVHLSEREYFAVPKNLKLLAVPL
Sbjct: 112 WQIGECVATWWRPNFETIMYPYCPPHITKPKECKKLYLVHLSEREYFAVPKNLKLLAVPL 171

Query: 675 FELYDNVQRYGPVISTIPQQLSRFQFNMI 761
           FELYDNVQRYGPVISTIPQQLSRFQFNMI
Sbjct: 172 FELYDNVQRYGPVISTIPQQLSRFQFNMI 200



 Score =  100 bits (250), Expect(2) = e-103
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = +1

Query: 112 SPVVNTYPLSSYTFGTKEPKMEKDTSVSDRLARMKVNYMKEGMRTSVEAILL 267
           S VVNTYPLSSYTFGTKEPKMEKDTSV+DRLARMKVNYMKEGMRTSVEAILL
Sbjct: 6   SAVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILL 57


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