BLASTX nr result

ID: Papaver23_contig00001712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001712
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298178.1| light-harvesting complex II protein Lhcb6 [P...   189   2e-46
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   189   2e-46
ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein C...   188   5e-46
dbj|BAI52949.1| light-harvesting complex II protein [Citrullus l...   188   5e-46
ref|XP_002447312.1| hypothetical protein SORBIDRAFT_06g032690 [S...   188   5e-46

>ref|XP_002298178.1| light-harvesting complex II protein Lhcb6 [Populus trichocarpa]
           gi|118486723|gb|ABK95197.1| unknown [Populus
           trichocarpa] gi|222845436|gb|EEE82983.1|
           light-harvesting complex II protein Lhcb6 [Populus
           trichocarpa]
          Length = 257

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/89 (98%), Positives = 89/89 (100%)
 Frame = -1

Query: 267 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 88
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SGIPWFEAGADPGAIAPFS
Sbjct: 81  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFS 140

Query: 87  FGSLLGTQLLLMGWVESKRWVDFFNPESQ 1
           FGSLLGTQLLLMGWVESKRWVDFFNPESQ
Sbjct: 141 FGSLLGTQLLLMGWVESKRWVDFFNPESQ 169


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  189 bits (481), Expect = 2e-46
 Identities = 88/89 (98%), Positives = 89/89 (100%)
 Frame = -1

Query: 267 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 88
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SGIPWFEAGADPGAIAPFS
Sbjct: 81  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFS 140

Query: 87  FGSLLGTQLLLMGWVESKRWVDFFNPESQ 1
           FGSLLGTQLLLMGWVESKRWVDFFNPESQ
Sbjct: 141 FGSLLGTQLLLMGWVESKRWVDFFNPESQ 169


>ref|XP_004140973.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
           chloroplastic-like [Cucumis sativus]
           gi|449497079|ref|XP_004160305.1| PREDICTED: chlorophyll
           a-b binding protein CP24 10A, chloroplastic-like
           [Cucumis sativus]
          Length = 255

 Score =  188 bits (478), Expect = 5e-46
 Identities = 87/89 (97%), Positives = 89/89 (100%)
 Frame = -1

Query: 267 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 88
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQA+SGIPWFEAGADPGAIAPFS
Sbjct: 79  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFS 138

Query: 87  FGSLLGTQLLLMGWVESKRWVDFFNPESQ 1
           FGSLLGTQLLLMGWVESKRWVDFFNPESQ
Sbjct: 139 FGSLLGTQLLLMGWVESKRWVDFFNPESQ 167


>dbj|BAI52949.1| light-harvesting complex II protein [Citrullus lanatus subsp.
           vulgaris]
          Length = 255

 Score =  188 bits (478), Expect = 5e-46
 Identities = 87/89 (97%), Positives = 89/89 (100%)
 Frame = -1

Query: 267 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 88
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQA+SGIPWFEAGADPGAIAPFS
Sbjct: 79  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFS 138

Query: 87  FGSLLGTQLLLMGWVESKRWVDFFNPESQ 1
           FGSLLGTQLLLMGWVESKRWVDFFNPESQ
Sbjct: 139 FGSLLGTQLLLMGWVESKRWVDFFNPESQ 167


>ref|XP_002447312.1| hypothetical protein SORBIDRAFT_06g032690 [Sorghum bicolor]
           gi|241938495|gb|EES11640.1| hypothetical protein
           SORBIDRAFT_06g032690 [Sorghum bicolor]
          Length = 255

 Score =  188 bits (478), Expect = 5e-46
 Identities = 87/89 (97%), Positives = 89/89 (100%)
 Frame = -1

Query: 267 GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAYSGIPWFEAGADPGAIAPFS 88
           GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA+SGIPWFEAGADPGAIAPFS
Sbjct: 79  GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADPGAIAPFS 138

Query: 87  FGSLLGTQLLLMGWVESKRWVDFFNPESQ 1
           FGSLLGTQLLLMGWVESKRWVDFFNP+SQ
Sbjct: 139 FGSLLGTQLLLMGWVESKRWVDFFNPDSQ 167


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