BLASTX nr result

ID: Papaver23_contig00001613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001613
         (1704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera...    56   2e-08
gb|EAZ07655.1| hypothetical protein OsI_29908 [Oryza sativa Indi...    54   3e-07
gb|EEE69010.1| hypothetical protein OsJ_27957 [Oryza sativa Japo...    54   3e-07
dbj|BAD09696.1| putative pumilio-family RNA-binding domain-conta...    54   3e-07
ref|NP_001062262.1| Os08g0519800 [Oryza sativa Japonica Group] g...    54   3e-07

>ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
            gi|297735758|emb|CBI18445.3| unnamed protein product
            [Vitis vinifera]
          Length = 1053

 Score = 55.8 bits (133), Expect(2) = 2e-08
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
 Frame = -2

Query: 737  SSKMYGCRVILKELDVIEFDRKTQLFMSLMG-IF*YV------YLMESCDA*MCDCVPIE 579
            S +MYGCRVI K L+VIE D+KTQL   L G +   V      ++++ C     +C+P E
Sbjct: 778  SLQMYGCRVIQKALEVIELDQKTQLVHELDGHVIRCVRDQNGNHVIQKC----IECIPTE 833

Query: 578  ETGFVISAFHKQGAAPSTYP 519
            + GF+ISAF  Q    S++P
Sbjct: 834  KIGFIISAFKGQVTVLSSHP 853



 Score = 30.4 bits (67), Expect(2) = 2e-08
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 808 FECGSVKKRKKLVYQLVGHFFPSSLQ 731
           FE G+ ++R++L YQL G   P SLQ
Sbjct: 755 FEHGTPEQRRELAYQLAGQMIPLSLQ 780


>gb|EAZ07655.1| hypothetical protein OsI_29908 [Oryza sativa Indica Group]
          Length = 1806

 Score = 53.5 bits (127), Expect(2) = 3e-07
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 737  SSKMYGCRVILKELDVIEFDRKTQLFMSLMG-IF*YV------YLMESCDA*MCDCVPIE 579
            S +MYGCRVI K L+V+E D+K +L   L G I   V      ++++ C     +CVP E
Sbjct: 1551 SLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKC----IECVPTE 1606

Query: 578  ETGFVISAFHKQGAAPSTYP 519
              GFV+SAF  Q A+ S +P
Sbjct: 1607 HIGFVVSAFRGQVASLSMHP 1626



 Score = 28.9 bits (63), Expect(2) = 3e-07
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 808  FECGSVKKRKKLVYQLVGHFFPSSLQ 731
            FE G+ ++R+ L  +LVGH  P SLQ
Sbjct: 1528 FEHGTPEQRRDLATKLVGHVLPLSLQ 1553


>gb|EEE69010.1| hypothetical protein OsJ_27957 [Oryza sativa Japonica Group]
          Length = 1138

 Score = 53.5 bits (127), Expect(2) = 3e-07
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 737  SSKMYGCRVILKELDVIEFDRKTQLFMSLMG-IF*YV------YLMESCDA*MCDCVPIE 579
            S +MYGCRVI K L+V+E D+K +L   L G I   V      ++++ C     +CVP E
Sbjct: 890  SLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKC----IECVPTE 945

Query: 578  ETGFVISAFHKQGAAPSTYP 519
              GFV+SAF  Q A+ S +P
Sbjct: 946  HIGFVVSAFRGQVASLSMHP 965



 Score = 28.9 bits (63), Expect(2) = 3e-07
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 808 FECGSVKKRKKLVYQLVGHFFPSSLQ 731
           FE G+ ++R+ L  +LVGH  P SLQ
Sbjct: 867 FEHGTPEQRRDLATKLVGHVLPLSLQ 892


>dbj|BAD09696.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
           [Oryza sativa Japonica Group]
           gi|42409165|dbj|BAD10431.1| putative pumilio-family
           RNA-binding domain-containing protein(PPD1) [Oryza
           sativa Japonica Group] gi|215694322|dbj|BAG89315.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 1006

 Score = 53.5 bits (127), Expect(2) = 3e-07
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 737 SSKMYGCRVILKELDVIEFDRKTQLFMSLMG-IF*YV------YLMESCDA*MCDCVPIE 579
           S +MYGCRVI K L+V+E D+K +L   L G I   V      ++++ C     +CVP E
Sbjct: 758 SLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKC----IECVPTE 813

Query: 578 ETGFVISAFHKQGAAPSTYP 519
             GFV+SAF  Q A+ S +P
Sbjct: 814 HIGFVVSAFRGQVASLSMHP 833



 Score = 28.9 bits (63), Expect(2) = 3e-07
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 808 FECGSVKKRKKLVYQLVGHFFPSSLQ 731
           FE G+ ++R+ L  +LVGH  P SLQ
Sbjct: 735 FEHGTPEQRRDLATKLVGHVLPLSLQ 760


>ref|NP_001062262.1| Os08g0519800 [Oryza sativa Japonica Group]
           gi|113624231|dbj|BAF24176.1| Os08g0519800 [Oryza sativa
           Japonica Group]
          Length = 1001

 Score = 53.5 bits (127), Expect(2) = 3e-07
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -2

Query: 737 SSKMYGCRVILKELDVIEFDRKTQLFMSLMG-IF*YV------YLMESCDA*MCDCVPIE 579
           S +MYGCRVI K L+V+E D+K +L   L G I   V      ++++ C     +CVP E
Sbjct: 753 SLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKC----IECVPTE 808

Query: 578 ETGFVISAFHKQGAAPSTYP 519
             GFV+SAF  Q A+ S +P
Sbjct: 809 HIGFVVSAFRGQVASLSMHP 828



 Score = 28.9 bits (63), Expect(2) = 3e-07
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 808 FECGSVKKRKKLVYQLVGHFFPSSLQ 731
           FE G+ ++R+ L  +LVGH  P SLQ
Sbjct: 730 FEHGTPEQRRDLATKLVGHVLPLSLQ 755


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