BLASTX nr result

ID: Papaver23_contig00001600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001600
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599216.1| F-box/kelch-repeat protein [Medicago truncat...    65   1e-08
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    59   6e-07
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    58   2e-06
ref|XP_002466739.1| hypothetical protein SORBIDRAFT_01g013220 [S...    55   9e-06

>ref|XP_003599216.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355488264|gb|AES69467.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 393

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 14/193 (7%)
 Frame = +1

Query: 94  FGYSPSTNEYKVVRIYL-----EEVYVYTLGDGKGWRHIGTRKECNKSGVGVYVHG---- 246
           FGY  ST+ YK+V +        EV  YTLG    WR I      + S VGV+  G    
Sbjct: 178 FGYGHSTHTYKIVGVSFFPDKSNEVCCYTLGTDC-WRRIQDLPYGSTSAVGVFARGTINW 236

Query: 247 -AYNRLDKDRNLVSFDLEDEKFGVLPSPACFRDWDDYSYQLREDGECLSIVHESQRAVYD 423
            AY+      N+VS DLE E +  L  P    D    S+ LRE  +CL I    ++ V D
Sbjct: 237 LAYDSQSSSHNIVSLDLEKESYQKLLKPNLETD----SWSLRESMDCLCIFARFEKFV-D 291

Query: 424 VWVLKKKELDVCETNKDEQDNQSWSWIKAYTLHDDRDASQKLNRKRLEPFAITKDREVLF 603
           +W++K+             DN+   W K Y +    D +Q  +   L    +  + + L+
Sbjct: 292 IWIMKR------------YDNEE-PWSKLYRVPYMHDLAQLYHAPYLHDLDLNPNDDALY 338

Query: 604 --HDDR--FFYRH 630
              DD+   +YR+
Sbjct: 339 ITEDDQVLMYYRN 351


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 50/168 (29%), Positives = 71/168 (42%), Gaps = 25/168 (14%)
 Frame = +1

Query: 91  GFGYSPSTNEYKVVRIY------------------LEEVYVYTLGDGKGWRHIG-----T 201
           GFG++P TNEYKV+RI                   L +V + TLG   GWR +G      
Sbjct: 169 GFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLG-CPGWRSLGKVSYRL 227

Query: 202 RKECNKSGVGVYVHGAYN--RLDKDRNLVSFDLEDEKFGVLPSPACFRDWDDYSYQLRED 375
            +  +++ V   +H      R    R LVSFDL DE+F  +P P C    +   Y L   
Sbjct: 228 VRRASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPDC-GGLNRCDYHLAVL 286

Query: 376 GECLSIVHESQRAVYDVWVLKKKELDVCETNKDEQDNQSWSWIKAYTL 519
             CLS+         ++WV+K             + N   SW+K Y +
Sbjct: 287 RGCLSVAVYCNYGRLEIWVMK-------------EYNVKESWVKEYNI 321


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 55/181 (30%), Positives = 75/181 (41%), Gaps = 26/181 (14%)
 Frame = +1

Query: 91  GFGYSPSTNEYKVVRIYL------------------EEVYVYTLGDGKGWRHIG-TRKEC 213
           GFGY P T  YKVV++                     EV V TLG    WR +G    + 
Sbjct: 170 GFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSYQL 228

Query: 214 NKSGVGVYVHGAYNRLDKDRN-----LVSFDLEDEKFGVLPSPACFRDWDDYSYQLREDG 378
           ++      V+G  + + + R      +VSFDL DE+F  +P P C       +Y L   G
Sbjct: 229 DRWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDC-GGLSRCNYHLLVLG 287

Query: 379 ECLSIVHESQRAVYDVWVLKKKELDVCETNKDEQDNQSWSWIKAYTL--HDDRDASQKLN 552
            CLS          +VWV+  KE DV E           SWIK + +  H  +   Q +N
Sbjct: 288 GCLSAAVHRSNGKLEVWVM--KEYDVKE-----------SWIKEFNIGAHLPKGLKQDVN 334

Query: 553 R 555
           R
Sbjct: 335 R 335


>ref|XP_002466739.1| hypothetical protein SORBIDRAFT_01g013220 [Sorghum bicolor]
           gi|241920593|gb|EER93737.1| hypothetical protein
           SORBIDRAFT_01g013220 [Sorghum bicolor]
          Length = 810

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 15/131 (11%)
 Frame = +1

Query: 91  GFGYSPSTNEYKVVRIYLEE----VYVYTLGDGKGWRHIGTRK-ECNK-----SGVGVYV 240
           G G+  +T++YKVVR+Y         V+TL     WR   T   +C++     S  GV+ 
Sbjct: 205 GLGHCSTTDQYKVVRMYCHRNAMFCEVFTLDQSTYWRPAATEPPQCHRLRLRISQGGVFC 264

Query: 241 HGAYNRLDKDRNLVSFDLEDEKFGVLPSPACFRDWDDYS-YQLREDGECLSIVHESQ--- 408
           +G+ + +  D  +++F+++DE FG L  PA      +YS + L E   CL +   SQ   
Sbjct: 265 NGSLHFVAHDGVIIAFNVDDETFGTLRPPAGL----EYSFFDLTELDGCLCVYFSSQVPT 320

Query: 409 -RAVYDVWVLK 438
             + Y +W+L+
Sbjct: 321 PDSPYHIWLLR 331


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