BLASTX nr result

ID: Papaver23_contig00001563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001563
         (1565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   944   0.0  
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...   923   0.0  
ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Gl...   919   0.0  
ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Gl...   919   0.0  
gb|ABR16132.1| unknown [Picea sitchensis]                             919   0.0  

>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  944 bits (2441), Expect = 0.0
 Identities = 472/522 (90%), Positives = 489/522 (93%), Gaps = 1/522 (0%)
 Frame = -1

Query: 1565 MIDFIYASTSNYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRARLSSEGSVGTDSFT 1386
            MIDFI+AST+NYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISR+R+S EGS G D FT
Sbjct: 143  MIDFIHASTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRSRISHEGSTGNDGFT 202

Query: 1385 ISKAIGEVEGTHDELLNGIELAAA-EEKETHAFEVDPAQVENVKQRCLPNALNYPMLEEY 1209
            ISK +GE+EG HDEL+N  ELAAA EEKETH+FEVDPAQVENVKQRCLPNALNYPMLEEY
Sbjct: 203  ISKTVGEIEGRHDELINEAELAAAAEEKETHSFEVDPAQVENVKQRCLPNALNYPMLEEY 262

Query: 1208 DFRNDTVNADLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 1029
            DFRNDTVN DL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC
Sbjct: 263  DFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 322

Query: 1028 RIRKSCLCLATNAVSVDQWAFQFSLWSTIREDQICRFTSDSKERFRGNAGVVVTTYNMVA 849
            RIRKSCLCLATNAVSVDQWAFQF LWSTIR++QICRFTSDSKERFRGNAGVVVTTYNMVA
Sbjct: 323  RIRKSCLCLATNAVSVDQWAFQFKLWSTIRDEQICRFTSDSKERFRGNAGVVVTTYNMVA 382

Query: 848  FGGXXXXXXXXXXXXXXXXEWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 669
            FGG                EWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED
Sbjct: 383  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 442

Query: 668  DRITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLRKENSKKKQAL 489
            +RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL+KENSKKKQAL
Sbjct: 443  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQAL 502

Query: 488  YVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHQERTRI 309
            YVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSH ERT+I
Sbjct: 503  YVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKI 562

Query: 308  LHAFKNSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQD 129
            L AFK   DVNT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG+ QD
Sbjct: 563  LEAFKTHKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGRLQD 622

Query: 128  RMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK 3
            R+AGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK
Sbjct: 623  RLAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK 664


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score =  923 bits (2386), Expect = 0.0
 Identities = 467/522 (89%), Positives = 482/522 (92%), Gaps = 1/522 (0%)
 Frame = -1

Query: 1565 MIDFIYASTSNYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRARLSSEGSVGTDSFT 1386
            MIDFI+ ST+NYGKVKLVLKKNRY VESPFPEVLK LL+DEVISRARL SE  V   SFT
Sbjct: 141  MIDFIHGSTANYGKVKLVLKKNRYLVESPFPEVLKRLLKDEVISRARLVSEAHVN-GSFT 199

Query: 1385 ISKAIGEVEGTHDELLNGIELAAA-EEKETHAFEVDPAQVENVKQRCLPNALNYPMLEEY 1209
            ISK  GE+  +HD LLN  ELAAA EEKETH+FEVDP+QVENVKQRCLPNALNYPMLEEY
Sbjct: 200  ISKTAGEIGTSHDGLLNEAELAAAAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEY 259

Query: 1208 DFRNDTVNADLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 1029
            DFRNDTVN DL+MELKP AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC
Sbjct: 260  DFRNDTVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 319

Query: 1028 RIRKSCLCLATNAVSVDQWAFQFSLWSTIREDQICRFTSDSKERFRGNAGVVVTTYNMVA 849
            RI+KSCLCLATNAVSVDQWAFQF LWSTIRE+QICRFTSDSKERF+GNAGVVVTTYNMVA
Sbjct: 320  RIKKSCLCLATNAVSVDQWAFQFQLWSTIREEQICRFTSDSKERFQGNAGVVVTTYNMVA 379

Query: 848  FGGXXXXXXXXXXXXXXXXEWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 669
            FGG                EWGLLLMDEVHVVPAHMFRKVIS+TKSHCKLGLTATLVRED
Sbjct: 380  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVRED 439

Query: 668  DRITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLRKENSKKKQAL 489
            +RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL+KENSKKKQAL
Sbjct: 440  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKKQAL 499

Query: 488  YVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHQERTRI 309
            YVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSH ERT+I
Sbjct: 500  YVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHAERTKI 559

Query: 308  LHAFKNSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQD 129
            L AFK S DVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQD
Sbjct: 560  LQAFKTSKDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQD 619

Query: 128  RMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK 3
            RMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK
Sbjct: 620  RMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK 661


>ref|XP_003532875.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
          Length = 768

 Score =  919 bits (2375), Expect = 0.0
 Identities = 462/522 (88%), Positives = 482/522 (92%), Gaps = 1/522 (0%)
 Frame = -1

Query: 1565 MIDFIYASTSNYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRARLSSEGSVGTDSFT 1386
            MI FI+ ST+NYGKVKLVLKKNRYF+ESPFPEVLKTLLRDE ISR+RL SE +V  D FT
Sbjct: 141  MIKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRLISE-NVNGDGFT 199

Query: 1385 ISKAIGEVEGTHDELLNGIELAA-AEEKETHAFEVDPAQVENVKQRCLPNALNYPMLEEY 1209
            ISKA GE+EGTHDELLN  E+AA AEEKE H+FE+DP+QVENVKQRCLPNALNYPMLEEY
Sbjct: 200  ISKAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEY 259

Query: 1208 DFRNDTVNADLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 1029
            DFRNDTVN DL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC
Sbjct: 260  DFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 319

Query: 1028 RIRKSCLCLATNAVSVDQWAFQFSLWSTIREDQICRFTSDSKERFRGNAGVVVTTYNMVA 849
            RI+KSCLCLATNAVSVDQWAFQF LWSTIRE+QICRFTSDSKERFRGNAGVVVTTYNMVA
Sbjct: 320  RIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVVVTTYNMVA 379

Query: 848  FGGXXXXXXXXXXXXXXXXEWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 669
            FGG                EWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED
Sbjct: 380  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 439

Query: 668  DRITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLRKENSKKKQAL 489
            +RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL+KENSKK+QAL
Sbjct: 440  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQAL 499

Query: 488  YVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHQERTRI 309
            YVMNPNKFRACEFLI FHE  RGDKIIVFADNLFALTEYAMKLRKPMIYGATSH ERT+I
Sbjct: 500  YVMNPNKFRACEFLINFHEGTRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKI 559

Query: 308  LHAFKNSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQD 129
            L AFK S D+NT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGK +D
Sbjct: 560  LQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLED 619

Query: 128  RMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK 3
            RMAGGKEEYNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFK
Sbjct: 620  RMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFK 661


>ref|XP_003525384.1| PREDICTED: DNA repair helicase XPB1-like [Glycine max]
          Length = 768

 Score =  919 bits (2375), Expect = 0.0
 Identities = 460/522 (88%), Positives = 483/522 (92%), Gaps = 1/522 (0%)
 Frame = -1

Query: 1565 MIDFIYASTSNYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRARLSSEGSVGTDSFT 1386
            M+ FI+ ST+NYGKVKLVLKKNRYF+ESPFPEVLKTLLRDE ISR+R+ SE +V  D FT
Sbjct: 141  MVKFIHDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDETISRSRIISE-NVNGDGFT 199

Query: 1385 ISKAIGEVEGTHDELLNGIELAA-AEEKETHAFEVDPAQVENVKQRCLPNALNYPMLEEY 1209
            ISKA GE+EGTHDELLN  E+AA AEEKE H+FE+DP+QVENVKQRCLPNALNYPMLEEY
Sbjct: 200  ISKAAGEIEGTHDELLNEAEVAAVAEEKEAHSFEIDPSQVENVKQRCLPNALNYPMLEEY 259

Query: 1208 DFRNDTVNADLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 1029
            DFRNDTVN DL+MELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC
Sbjct: 260  DFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 319

Query: 1028 RIRKSCLCLATNAVSVDQWAFQFSLWSTIREDQICRFTSDSKERFRGNAGVVVTTYNMVA 849
            RI+KSCLCLATNAVSVDQWAFQF LWSTIRE+QICRFTSDSKERFRGNAGVVVTTYNMVA
Sbjct: 320  RIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVVVTTYNMVA 379

Query: 848  FGGXXXXXXXXXXXXXXXXEWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 669
            FGG                EWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED
Sbjct: 380  FGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVRED 439

Query: 668  DRITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLRKENSKKKQAL 489
            +RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYL+KENSKK+QAL
Sbjct: 440  ERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQAL 499

Query: 488  YVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHQERTRI 309
            YVMNPNKFRACEFLI FHE+ RGDKIIVFADNLFALTEYAMKLRKPMIYGATSH ERT+I
Sbjct: 500  YVMNPNKFRACEFLINFHERTRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKI 559

Query: 308  LHAFKNSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKHQD 129
            L AFK S D+NT+FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGK +D
Sbjct: 560  LQAFKTSKDINTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLED 619

Query: 128  RMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK 3
            RMAGGKEEYNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFK
Sbjct: 620  RMAGGKEEYNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFK 661


>gb|ABR16132.1| unknown [Picea sitchensis]
          Length = 772

 Score =  919 bits (2375), Expect = 0.0
 Identities = 464/525 (88%), Positives = 485/525 (92%), Gaps = 4/525 (0%)
 Frame = -1

Query: 1565 MIDFIYASTSNYGKVKLVLKKNRYFVESPFPEVLKTLLRDEVISRARL-SSEGS--VGTD 1395
            +IDFI  ST+NYGKVKLVLKKNRYFVESP+PEVLKTLL+D VI+R+RL SSE S   G D
Sbjct: 141  IIDFINGSTANYGKVKLVLKKNRYFVESPYPEVLKTLLKDAVIARSRLHSSEVSDIKGGD 200

Query: 1394 SFTISKAIGEVEGTHDELLNGIELAAA-EEKETHAFEVDPAQVENVKQRCLPNALNYPML 1218
             FT+SKA  E+ G+H EL+   ++ AA EEKETH+FE+DPAQVENVKQRCLPNALNYPML
Sbjct: 201  MFTVSKAPNEMGGSHTELIGSEDITAAIEEKETHSFEIDPAQVENVKQRCLPNALNYPML 260

Query: 1217 EEYDFRNDTVNADLNMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVS 1038
            EEYDFRNDTVN DLN+ELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVS
Sbjct: 261  EEYDFRNDTVNPDLNVELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVS 320

Query: 1037 AACRIRKSCLCLATNAVSVDQWAFQFSLWSTIREDQICRFTSDSKERFRGNAGVVVTTYN 858
            AACRIRKSCLCLATNAVSVDQWAFQF LWSTIR+DQICRFTSDSKERFRGN GVVVTTYN
Sbjct: 321  AACRIRKSCLCLATNAVSVDQWAFQFKLWSTIRDDQICRFTSDSKERFRGNVGVVVTTYN 380

Query: 857  MVAFGGXXXXXXXXXXXXXXXXEWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLV 678
            MVAFGG                EWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLV
Sbjct: 381  MVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLV 440

Query: 677  REDDRITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLRKENSKKK 498
            RED+RITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMT+EFFAEYL+KENSKKK
Sbjct: 441  REDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTREFFAEYLKKENSKKK 500

Query: 497  QALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHQER 318
            QALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSH ER
Sbjct: 501  QALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHSER 560

Query: 317  TRILHAFKNSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGK 138
            TRIL+AFK+SPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGK
Sbjct: 561  TRILYAFKHSPDVNTVFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGK 620

Query: 137  HQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK 3
            HQDRMAGGKEEYNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFK
Sbjct: 621  HQDRMAGGKEEYNAFFYSLVSNDTQEMYYSTKRQQFLIDQGYSFK 665


Top