BLASTX nr result

ID: Papaver23_contig00001096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00001096
         (3097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE43199.1| SFBBalpha protein [Pyrus x bretschneideri]              64   2e-07
gb|ADE43196.1| SFBBalpha protein [Pyrus pyrifolia] gi|345433661|...    61   2e-06
ref|XP_002315233.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-06
gb|ACH54098.1| SFBB12-alpha [Pyrus pyrifolia]                          60   5e-06
gb|ACH54091.1| SFBB19-alpha [Pyrus x bretschneideri]                   59   6e-06

>gb|ADE43199.1| SFBBalpha protein [Pyrus x bretschneideri]
          Length = 392

 Score = 64.3 bits (155), Expect = 2e-07
 Identities = 75/292 (25%), Positives = 122/292 (41%), Gaps = 33/292 (11%)
 Frame = -1

Query: 3097 TRLPARDLGRFTTVSKLWYDSIHDNARFTASHFAQQQNSEFN----LVFNLFNVSI--NR 2936
            +RLP + L RF  V K W  +I ++  F A H +   +++F+    ++FN   V +  +R
Sbjct: 19   SRLPPKSLMRFKCVHKSWC-TIINSPSFVAKHLSNTVDNKFSSFTCILFNRSQVHVFADR 77

Query: 2935 QLRNCFF------SLQKDRHDEFLNYKSF---CPLIYNEPCEPLGYCNGLACLNLVRDQE 2783
              +   F      S++ D H+   + +      P+   +  +  GYCNG+ C+ + ++  
Sbjct: 78   SWKRDVFWSMINLSIESDEHNLHYDVEDLNIPFPMEVQDNVQLYGYCNGIVCVIVGKN-- 135

Query: 2782 PGVDDEGAVAIINPSRSE-----TLTHLYAIPTSGKY------LGHGFGFDSSSNEYKVV 2636
                    V + NP+  E       + L  +PT GK+       G GFG+D  + EYKVV
Sbjct: 136  --------VLLCNPATREFKQLPDSSLLLPLPT-GKFGLETLFKGLGFGYDCKTKEYKVV 186

Query: 2635 VI-------YTTTTSAAVESGSQGFLCMVITLGTKSWRKSVTSTSDMSPPPGCSPFPDQM 2477
             I       Y+    +  E     +   V T+   SW++    TS     P C P+    
Sbjct: 187  RIIENCDCEYSEGKESYYERILLPYTAEVYTMAANSWKEIKIDTSS-DTDPYCIPY---- 241

Query: 2476 VTRPWRNDRRSASLCGGNLVWTITNSSMNGYTIEMLLSFDIHSEKIQFIGLP 2321
                      S S+C   L +   N   NG   E + SFD+  E  + I LP
Sbjct: 242  ----------SCSVCLKGLCYWFAND--NG---EYIFSFDLGDEIFRRIELP 278


>gb|ADE43196.1| SFBBalpha protein [Pyrus pyrifolia] gi|345433661|dbj|BAK69463.1|
            S-locus F-box brothers6-S3 [Pyrus pyrifolia]
          Length = 392

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 62/239 (25%), Positives = 103/239 (43%), Gaps = 36/239 (15%)
 Frame = -1

Query: 3097 TRLPARDLGRFTTVSKLWYDSIHDNARFTASHFAQQQNSEFN----LVFNLFNVSI--NR 2936
            +RLP + L RF  V K W  +I ++  F A H +   +++F+    ++FN   V +  +R
Sbjct: 19   SRLPPKSLMRFKCVHKSWC-TIINSPSFVAKHLSNTVDNKFSSFTCILFNRSQVHVFADR 77

Query: 2935 QLRNCFF------SLQKDRHDEFLNYKSF---CPLIYNEPCEPLGYCNGLACLNLVRDQE 2783
              +   F      S++ D H+   + K      P+   +  +  GYCNG+ C+ +     
Sbjct: 78   SWKRDVFWSMINLSIESDEHNLHYDVKDLNIPFPMEVQDNVQLYGYCNGIVCVIV----- 132

Query: 2782 PGVDDEGAVAIINPSRSE-----TLTHLYAIPTSG-----KYLGHGFGFDSSSNEYKVVV 2633
                  G V + NP+  E       + L  +PT        + G GFG+D  + EYKVV 
Sbjct: 133  -----GGNVLLCNPATREFKQLPDSSLLLPLPTGRFGLETLFKGLGFGYDCKTKEYKVVR 187

Query: 2632 I-------YTTTTSAAVESGSQGFLCMVITLGTKSWRK-SVTSTSDMSP---PPGCSPF 2489
            I       Y+    +  E     +   V T   KSW++  + ++SD  P   P  CS +
Sbjct: 188  IIENCDCEYSEGKESYYERILLPYTAEVYTTAAKSWKEIKIDTSSDTDPYCIPYSCSVY 246


>ref|XP_002315233.1| predicted protein [Populus trichocarpa] gi|222864273|gb|EEF01404.1|
            predicted protein [Populus trichocarpa]
          Length = 381

 Score = 60.8 bits (146), Expect = 2e-06
 Identities = 68/252 (26%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
 Frame = -1

Query: 3091 LPARDLGRFTTVSKLWYDSIHDNARFTASHFAQQQNSEFNLVFNLFNVSINRQLRNCFFS 2912
            LPA+ L RF +VSK W +S+  +A F + H AQ +     L+F+  N S + +L N    
Sbjct: 19   LPAKCLVRFRSVSKYW-NSLITSAEFISIHLAQAKPL---LLFHHHNQSYSLRLDNESLD 74

Query: 2911 LQKDRHDEFLNYKSFCPLIYNEPCEPLGYCNGLACLNLVRDQEPGVDDEGAVAIINPSRS 2732
            +  +   E  + +       ++  + +G CNG+ CL L   Q+ G     ++ + NPS  
Sbjct: 75   MWSNSEFELPSKRE------DDDFQIIGSCNGVICL-LNSPQDHG----HSIILWNPSIG 123

Query: 2731 ETLTHLYAIPTSGKYLG-HGFGFDSSSNEYKVVVIYTTTTSAAVESGSQGFLCMVITLGT 2555
            ++L +L     S  + G  GFGF+  SN+YK V + T               C V ++  
Sbjct: 124  KSL-NLVLPRLSDPFHGIFGFGFNRQSNDYKFVRVATPHYPVG---------CQVYSVKE 173

Query: 2554 KSWRKSVTSTSDMSPPPG-CSPFPDQMVTRPW-RNDRRSASLCGGNLVWTITNSSMNGYT 2381
            +SW+       D+SP  G  +P P  +    W R+   + +   G L W +         
Sbjct: 174  RSWK-----AIDVSPALGYINPIPSVL----WGRSSSYNYAFLNGVLHWLVDREEFGS-- 222

Query: 2380 IEMLLSFDIHSE 2345
               +LSFD+ ++
Sbjct: 223  -RFVLSFDLRND 233


>gb|ACH54098.1| SFBB12-alpha [Pyrus pyrifolia]
          Length = 397

 Score = 59.7 bits (143), Expect = 5e-06
 Identities = 70/291 (24%), Positives = 114/291 (39%), Gaps = 32/291 (10%)
 Frame = -1

Query: 3097 TRLPARDLGRFTTVSKLWYDSIHDNARFTASHFAQQQNSEFN----LVFNLFNVSI--NR 2936
            +RLP + L RF  V K W  +I ++  F A H +   +++F+    ++FN   V +  +R
Sbjct: 19   SRLPPKSLMRFKCVRKSWC-TIINSPSFVAKHLSNTVDNKFSSFTCILFNRSQVHVFADR 77

Query: 2935 QLRNCFF------SLQKDRHDEFLNYKSF---CPLIYNEPCEPLGYCNGLACLNLVRDQE 2783
              +   F      S++ D H+   + K      P+   +  +  GYCNG+ C+ +  +  
Sbjct: 78   SWKRDVFWSTINLSIESDEHNLHYDVKDLNIPFPMEVQDNVQLYGYCNGIVCVIVGEN-- 135

Query: 2782 PGVDDEGAVAIINPSRSE-----TLTHLYAIPTSG-----KYLGHGFGFDSSSNEYKVVV 2633
                    V + NP+  E       + L  +PT        + G GFG+D  + EYKVV 
Sbjct: 136  --------VLLCNPATREFKQLPDSSLLLPLPTGRFGLETLFKGLGFGYDCKTKEYKVVR 187

Query: 2632 I-------YTTTTSAAVESGSQGFLCMVITLGTKSWRKSVTSTSDMSPPPGCSPFPDQMV 2474
            I       Y+    +  E     +   V T    SW++    TS     P C P+   M 
Sbjct: 188  IIENCDCEYSEGKESYYERILLPYTAEVYTTAANSWKEIKIDTSS-DTDPYCIPYSCSMY 246

Query: 2473 TRPWRNDRRSASLCGGNLVWTITNSSMNGYTIEMLLSFDIHSEKIQFIGLP 2321
             +             G   W   ++       E + SFD+  E    I LP
Sbjct: 247  LK-------------GFCYWFANDNG------EYIFSFDLGDEMFHRIELP 278


>gb|ACH54091.1| SFBB19-alpha [Pyrus x bretschneideri]
          Length = 392

 Score = 59.3 bits (142), Expect = 6e-06
 Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 37/240 (15%)
 Frame = -1

Query: 3097 TRLPARDLGRFTTVSKLWYDSIHDNARFTASHFAQQQNSEFN----LVFNLFNVSI--NR 2936
            +RLP + L RF  V K W  +I ++  F A H +   +++F+    ++FN   V +  +R
Sbjct: 19   SRLPPKSLMRFKCVHKSWC-TIINSPSFVAKHLSNTVDNKFSSFTCILFNRSQVHVFADR 77

Query: 2935 QLRNCFF------SLQKDRHDEFLNYKSF---CPLIYNEPCEPLGYCNGLACLNLVRDQE 2783
              +   F      S++ D H+   + K      P+   +  +  GYCNG+ C+ +  +  
Sbjct: 78   SWKRDVFWSTINLSIESDEHNLHYDVKDLNIPFPMEVQDNVQLYGYCNGIVCVIVGEN-- 135

Query: 2782 PGVDDEGAVAIINPSRSE-----TLTHLYAIPTSGKY------LGHGFGFDSSSNEYKVV 2636
                    V + NP+  E       + L  +PT GK+       G GFG+D  S EYKVV
Sbjct: 136  --------VLLCNPATREFKQLPDSSLLLPLPT-GKFGLETLFKGLGFGYDCKSKEYKVV 186

Query: 2635 VI-------YTTTTSAAVESGSQGFLCMVITLGTKSWRK-SVTSTSDMSP---PPGCSPF 2489
             I       Y+    +  E     +   V T    SW++  + ++SD  P   P  CS +
Sbjct: 187  RIIENCDCEYSEGKESYYERILLPYTAEVYTTAANSWKEIKIDTSSDTDPYCIPYSCSVY 246


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