BLASTX nr result
ID: Papaver23_contig00000982
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00000982
(1716 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransfera... 379 e-102
ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago tr... 379 e-102
ref|NP_851080.1| serine hydroxymethyltransferase 2 [Arabidopsis ... 377 e-102
gb|AAK59622.1| putative glycine hydroxymethyltransferase [Arabid... 377 e-102
ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, ... 375 e-101
>sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
Short=SHMT; AltName: Full=Glycine
hydroxymethyltransferase; AltName: Full=Serine methylase;
Flags: Precursor gi|169158|gb|AAA33687.1| serine
hydroxymethyltransferase [Pisum sativum]
Length = 518
Score = 379 bits (974), Expect = e-102
Identities = 187/202 (92%), Positives = 195/202 (96%)
Frame = +2
Query: 554 DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDYARIR 733
DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAY+R YDYARIR
Sbjct: 186 DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIR 245
Query: 734 QVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGLKE 913
+VCDKQKA+LLADMAHISGLVAAGVIPSPF+YADVVTTTTHKSLRGPRGAMIF+RKGLKE
Sbjct: 246 KVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKE 305
Query: 914 VNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLKNCS 1093
VNKQGKEV YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEY+AYQEQVL N S
Sbjct: 306 VNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSS 365
Query: 1094 QFAKTLNALGYDLVSGGTENHL 1159
+FAK L+ GYDLVSGGTENHL
Sbjct: 366 KFAKALSEKGYDLVSGGTENHL 387
Score = 243 bits (620), Expect = 1e-61
Identities = 120/141 (85%), Positives = 128/141 (90%)
Frame = +3
Query: 3 FNADSYYCMSSLPSEAVDDSKDKSRVQWPKQLNAPLAEVDPEIADIIELEKARQWKGLEL 182
F+A S Y SSLP EAV D K+ RV WPKQLN+PL +DPEIADIIELEKARQWKGLEL
Sbjct: 22 FSASSLYYKSSLPDEAVYD-KENPRVTWPKQLNSPLEVIDPEIADIIELEKARQWKGLEL 80
Query: 183 IPSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAK 362
IPSENFTS+SVM+AVGS+MTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAK
Sbjct: 81 IPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAK 140
Query: 363 WGVNVQSLSGSPANFQVYTAL 425
WGVNVQ LSGSP+NFQVYTAL
Sbjct: 141 WGVNVQPLSGSPSNFQVYTAL 161
Score = 107 bits (267), Expect = 1e-20
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +1
Query: 1282 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDAAVNLALKAKAECK 1458
IAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVAE+FDAAV+LALK KAE K
Sbjct: 411 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESK 469
>ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago truncatula]
gi|163889372|gb|ABY48142.1|
serine-hydroxymethyltransferase [Medicago truncatula]
gi|355514289|gb|AES95912.1| Serine
hydroxymethyltransferase [Medicago truncatula]
Length = 518
Score = 379 bits (974), Expect = e-102
Identities = 185/202 (91%), Positives = 196/202 (97%)
Frame = +2
Query: 554 DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDYARIR 733
DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAY+R YDYARIR
Sbjct: 186 DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIR 245
Query: 734 QVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGLKE 913
+VCDKQKA++LADMAHISGLVAAGVIPSPF+YADVVTTTTHKSLRGPRGAMIF+RKGLKE
Sbjct: 246 KVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKE 305
Query: 914 VNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLKNCS 1093
VNKQGKEV YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVL NC+
Sbjct: 306 VNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLSNCA 365
Query: 1094 QFAKTLNALGYDLVSGGTENHL 1159
+FA+ L+ GY+LVSGGTENHL
Sbjct: 366 KFAQALSEKGYELVSGGTENHL 387
Score = 243 bits (621), Expect = 9e-62
Identities = 121/141 (85%), Positives = 128/141 (90%)
Frame = +3
Query: 3 FNADSYYCMSSLPSEAVDDSKDKSRVQWPKQLNAPLAEVDPEIADIIELEKARQWKGLEL 182
F+A S Y SSLP EAV D K+ SRV WPKQLN+ L E+DPEIADIIELEKARQWKGLEL
Sbjct: 22 FSASSVYYKSSLPDEAVYD-KENSRVSWPKQLNSSLEEIDPEIADIIELEKARQWKGLEL 80
Query: 183 IPSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAK 362
IPSENFTS+SVM+AVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAK
Sbjct: 81 IPSENFTSLSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAK 140
Query: 363 WGVNVQSLSGSPANFQVYTAL 425
WGVNVQ LSGSP+NF VYTAL
Sbjct: 141 WGVNVQPLSGSPSNFHVYTAL 161
Score = 107 bits (268), Expect = 7e-21
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +1
Query: 1282 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDAAVNLALKAKAECK 1458
IAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVAE+FDA+VNLALK KAE K
Sbjct: 411 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDASVNLALKIKAESK 469
>ref|NP_851080.1| serine hydroxymethyltransferase 2 [Arabidopsis thaliana]
gi|227202628|dbj|BAH56787.1| AT5G26780 [Arabidopsis
thaliana] gi|332006219|gb|AED93602.1| serine
hydroxymethyltransferase 2 [Arabidopsis thaliana]
Length = 517
Score = 377 bits (968), Expect = e-102
Identities = 183/202 (90%), Positives = 197/202 (97%)
Frame = +2
Query: 554 DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDYARIR 733
DTKKISAVSIFFETMPYRLDE+TGYIDYDQLEKSA LFRPKLIVAGASAY+R YDYARIR
Sbjct: 185 DTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIR 244
Query: 734 QVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGLKE 913
+VC+KQKA++LADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF+RKGLKE
Sbjct: 245 KVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKE 304
Query: 914 VNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLKNCS 1093
+NKQGKEVMYDYED+INQAVFPGLQGGPHNHTITGLAVALKQA TPEYKAYQ+QVL+NCS
Sbjct: 305 INKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCS 364
Query: 1094 QFAKTLNALGYDLVSGGTENHL 1159
+FA+TL A GYDLVSGGT+NHL
Sbjct: 365 KFAETLLAKGYDLVSGGTDNHL 386
Score = 229 bits (583), Expect = 2e-57
Identities = 114/140 (81%), Positives = 125/140 (89%)
Frame = +3
Query: 6 NADSYYCMSSLPSEAVDDSKDKSRVQWPKQLNAPLAEVDPEIADIIELEKARQWKGLELI 185
N S MSSL + A+ +S +KSR W KQLNA L E+DPE+ADIIELEKARQWKG ELI
Sbjct: 22 NGGSLRFMSSLSTAAMAES-EKSRSSWIKQLNASLDEIDPEVADIIELEKARQWKGFELI 80
Query: 186 PSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKW 365
PSENFTS+SVM+AVGS+MTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAF+LDP+KW
Sbjct: 81 PSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKW 140
Query: 366 GVNVQSLSGSPANFQVYTAL 425
GVNVQSLSGSPANFQVYTAL
Sbjct: 141 GVNVQSLSGSPANFQVYTAL 160
Score = 106 bits (265), Expect = 2e-20
Identities = 56/81 (69%), Positives = 66/81 (81%)
Frame = +1
Query: 1282 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDAAVNLALKAKAECKK 1461
IAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDFAKVAE+FD AV +ALK KAE +
Sbjct: 410 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAE-SQ 468
Query: 1462 GS*F*RKIAEKENSRKWQSSL 1524
G+ +A +++ K QS +
Sbjct: 469 GTKLKDFVATMQSNEKLQSEM 489
>gb|AAK59622.1| putative glycine hydroxymethyltransferase [Arabidopsis thaliana]
Length = 517
Score = 377 bits (968), Expect = e-102
Identities = 183/202 (90%), Positives = 197/202 (97%)
Frame = +2
Query: 554 DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDYARIR 733
DTKKISAVSIFFETMPYRLDE+TGYIDYDQLEKSA LFRPKLIVAGASAY+R YDYARIR
Sbjct: 185 DTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIR 244
Query: 734 QVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGLKE 913
+VC+KQKA++LADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIF+RKGLKE
Sbjct: 245 KVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKGLKE 304
Query: 914 VNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLKNCS 1093
+NKQGKEVMYDYED+INQAVFPGLQGGPHNHTITGLAVALKQA TPEYKAYQ+QVL+NCS
Sbjct: 305 INKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLRNCS 364
Query: 1094 QFAKTLNALGYDLVSGGTENHL 1159
+FA+TL A GYDLVSGGT+NHL
Sbjct: 365 KFAETLLAKGYDLVSGGTDNHL 386
Score = 229 bits (583), Expect = 2e-57
Identities = 114/140 (81%), Positives = 125/140 (89%)
Frame = +3
Query: 6 NADSYYCMSSLPSEAVDDSKDKSRVQWPKQLNAPLAEVDPEIADIIELEKARQWKGLELI 185
N S MSSL + A+ +S +KSR W KQLNA L E+DPE+ADIIELEKARQWKG ELI
Sbjct: 22 NGGSLRFMSSLSTAAMAES-EKSRSSWIKQLNASLDEIDPEVADIIELEKARQWKGFELI 80
Query: 186 PSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKW 365
PSENFTS+SVM+AVGS+MTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAF+LDP+KW
Sbjct: 81 PSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKW 140
Query: 366 GVNVQSLSGSPANFQVYTAL 425
GVNVQSLSGSPANFQVYTAL
Sbjct: 141 GVNVQSLSGSPANFQVYTAL 160
Score = 104 bits (260), Expect = 6e-20
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 1282 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDAAVNLALKAKAECKK 1461
IAANKNTVPGDVSAMVPGGI MGTPALTSRGF+EEDFAKVAE+FD AV +ALK KAE +
Sbjct: 410 IAANKNTVPGDVSAMVPGGIHMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAE-SQ 468
Query: 1462 GS*F*RKIAEKENSRKWQSSL 1524
G+ +A +++ K QS +
Sbjct: 469 GTKLKDFVATMQSNEKLQSEM 489
>ref|XP_002262872.2| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Vitis
vinifera] gi|297736687|emb|CBI25704.3| unnamed protein
product [Vitis vinifera]
Length = 518
Score = 375 bits (964), Expect = e-101
Identities = 185/202 (91%), Positives = 195/202 (96%)
Frame = +2
Query: 554 DTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYSRFYDYARIR 733
DTKKISAVSIFFETMPYRL+ESTGYIDYDQLEKSATLFRPKLIVAGASAY+R YDYARIR
Sbjct: 186 DTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIR 245
Query: 734 QVCDKQKAILLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFYRKGLKE 913
+VCDKQKAILLADMAHISGLVAAGVIPSPFEYAD+VTTTTHKSLRGPRGAMIF+RKG+KE
Sbjct: 246 KVCDKQKAILLADMAHISGLVAAGVIPSPFEYADIVTTTTHKSLRGPRGAMIFFRKGVKE 305
Query: 914 VNKQGKEVMYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQVLKNCS 1093
VNKQGKEV+YDYEDKINQAVFPGLQGGPHNHTI GLAVALKQATT EYKAYQEQVL NCS
Sbjct: 306 VNKQGKEVLYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTSEYKAYQEQVLSNCS 365
Query: 1094 QFAKTLNALGYDLVSGGTENHL 1159
+FA+TL GY+LVSGGTENHL
Sbjct: 366 KFAETLIKKGYELVSGGTENHL 387
Score = 252 bits (643), Expect = 2e-64
Identities = 126/141 (89%), Positives = 132/141 (93%)
Frame = +3
Query: 3 FNADSYYCMSSLPSEAVDDSKDKSRVQWPKQLNAPLAEVDPEIADIIELEKARQWKGLEL 182
FN S Y M+SLP+EAV + K+KSRV WPKQLNAPL VDPEIADIIELEKARQWKGLEL
Sbjct: 22 FNGGSIYYMASLPNEAVYE-KEKSRVTWPKQLNAPLGVVDPEIADIIELEKARQWKGLEL 80
Query: 183 IPSENFTSVSVMEAVGSIMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAK 362
IPSENFTSVSVM+AVGSIMTNKYSEGYPGARYYGGNEYIDMAE+LCQKRALEAFRLDPAK
Sbjct: 81 IPSENFTSVSVMQAVGSIMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAK 140
Query: 363 WGVNVQSLSGSPANFQVYTAL 425
WGVNVQSLSGSPANFQVYTAL
Sbjct: 141 WGVNVQSLSGSPANFQVYTAL 161
Score = 102 bits (255), Expect = 2e-19
Identities = 50/57 (87%), Positives = 54/57 (94%)
Frame = +1
Query: 1282 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEEDFAKVAEFFDAAVNLALKAKAE 1452
IAANKNTVPGDVSAMVPGGIRMGTPALTSRGF+EEDF KVAE+FDAAV +A+K KAE
Sbjct: 411 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVTVAVKIKAE 467