BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000919
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   246   8e-63
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   234   3e-59
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   229   6e-58
ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [S...   226   5e-57
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   224   3e-56

>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223541388|gb|EEF42939.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  246 bits (627), Expect = 8e-63
 Identities = 153/300 (51%), Positives = 183/300 (61%), Gaps = 12/300 (4%)
 Frame = +3

Query: 81  ASSSLVLPSISIKTLVLSKTGRNTXXXXXXXXXXXXXXXXXXXISVSSSFPSN------- 239
           ++SSLVLPS++ KTL L    +                     IS+ SS  S+       
Sbjct: 5   SASSLVLPSLNPKTLSLCNPNK---------PISLSFKLHAKPISIPSSLFSSFVPLQQQ 55

Query: 240 KGCSSSRFVTRVA--AEFDQ---ASSGRDETNFSPDLKIFVGNLPFSVESADLAELFEQS 404
              SSSRFV  VA  +EF Q    SS  DE++FS DLK+FVGNLPF+V+SA LA LFE +
Sbjct: 56  PYSSSSRFVPSVAISSEFGQEEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESA 115

Query: 405 GTVEMVEVIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQLRVNSGPPPPKDD 584
           G VEMVEVIYDK++GRSRGFGFVTMSS DEV+AA +QFNGYE++GR LRVNSGPPP ++ 
Sbjct: 116 GNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRES 175

Query: 585 YSSRPPRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQG 764
             SR PR                                                  EQG
Sbjct: 176 SFSRSPRF---------------GGGGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQG 220

Query: 765 KVLEAKVVYDRETGRSRGFGFVTYGSAEEVQGAIDSLDGADLNGRSIRVSVAEARQRRQF 944
           KV++AKVVYDRE+GRSRGFGFVTY SAEEV+ AIDSL+GA+L+GR+IRVSVAEAR RRQF
Sbjct: 221 KVVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEARPRRQF 280


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  234 bits (597), Expect = 3e-59
 Identities = 149/297 (50%), Positives = 179/297 (60%), Gaps = 9/297 (3%)
 Frame = +3

Query: 81  ASSSLVLPSISI-KTLVLSKTGRNTXXXXXXXXXXXXXXXXXXXISVSSSFPSNKG--CS 251
           ++SSLVLPS+S+ KTL +SK    +                   IS+S   PS++G    
Sbjct: 3   SASSLVLPSLSLPKTLAISKP--TSVSFFSLPFSCSSLKLHSNSISLS---PSSRGFLTL 57

Query: 252 SSRFVTRVAAEFDQAS-----SGRDETNFSPDLKIFVGNLPFSVESADLAELFEQSGTVE 416
           SSRFV  VA   D        S   E +FSPDLK+FVGNLPF+V+SA LA LFEQ+G VE
Sbjct: 58  SSRFVRNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVE 117

Query: 417 MVEVIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQLRVNSG-PPPPKDDYSS 593
           MVEVIYDKI+GRSRGFGFVTMS+ +EV+AA +QFNGYE++GRQLRVNSG PP  +++ + 
Sbjct: 118 MVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNF 177

Query: 594 RPPRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQGKVL 773
           R                                                     EQGKV 
Sbjct: 178 RGEN------SNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVT 231

Query: 774 EAKVVYDRETGRSRGFGFVTYGSAEEVQGAIDSLDGADLNGRSIRVSVAEARQRRQF 944
           EA+V+YDRETGRSRGFGFVTY SAEEV  AI+SLDG DLNGRSIRV++AEAR RRQF
Sbjct: 232 EARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  229 bits (585), Expect = 6e-58
 Identities = 137/254 (53%), Positives = 161/254 (63%), Gaps = 10/254 (3%)
 Frame = +3

Query: 213 SVSSSFPSNKGCSSSRFVTRVA-AEFDQASSGRD-------ETNFSPDLKIFVGNLPFSV 368
           S++ S  S+  C SSRFV +V  ++FDQ     D       E NFSPDLKIFVGNLPFS 
Sbjct: 39  SLNLSLSSSSSCFSSRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSA 98

Query: 369 ESADLAELFEQSGTVEMVEVIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQL 548
           +SA LAELFE++G VEMVEVIYDK++GRSRGFGFVTMSS +EV+AA +QFNGYE+DGR L
Sbjct: 99  DSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRAL 158

Query: 549 RVNSGP-PPPKDDYSSRPPRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 725
           RVNSGP P  +++ S R                                           
Sbjct: 159 RVNSGPPPEKRENSSFR-------------------GGSRGGGSFDSSNRVYVGNLAWGV 199

Query: 726 XXXXXXXXXXEQGKVLEAKVVYDRETGRSRGFGFVTYGSAEEVQGAIDSLDGADLNGRSI 905
                     EQGKV++AKVVYDR++GRSRGFGFVTY SAEEV  AI+SLDG DLNGR+I
Sbjct: 200 DQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAI 259

Query: 906 RVSVAEAR-QRRQF 944
           RVS AEAR  RRQF
Sbjct: 260 RVSPAEARPPRRQF 273


>ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
           gi|241919059|gb|EER92203.1| hypothetical protein
           SORBIDRAFT_01g034120 [Sorghum bicolor]
          Length = 262

 Score =  226 bits (577), Expect = 5e-57
 Identities = 125/225 (55%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
 Frame = +3

Query: 273 VAAEFDQASSGRDETNFSPDLKIFVGNLPFSVESADLAELFEQSGTVEMVEVIYDKISGR 452
           V  E +       E  FS DL++FVGNLPFSV+SA LA LFEQ+G+VEMVEVIYDK++GR
Sbjct: 63  VTEELEAEGQPGGEEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGR 122

Query: 453 SRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQLRVNSGPPPPKDDYSSRPPRIXXXXXXXX 632
           SRGFGFVTMSS  EV+AAVEQFNGY +DGR LRVNSGPPPP+D  S R PR         
Sbjct: 123 SRGFGFVTMSSVQEVEAAVEQFNGYVLDGRSLRVNSGPPPPRDPSSQRGPR--------- 173

Query: 633 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQGKVLEAKVVYDRETGRS 812
                                                    EQG+VLEA++VYDRE+GRS
Sbjct: 174 ----------------GDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRS 217

Query: 813 RGFGFVTYGSAEEVQGAIDSLDGADLNGRSIRVSVAEAR-QRRQF 944
           RGFGFVTYGSAEEV+ AI +LDG+DL+GR IRV+VAE++  RRQF
Sbjct: 218 RGFGFVTYGSAEEVENAISNLDGSDLDGRQIRVTVAESKPPRRQF 262


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  224 bits (571), Expect = 3e-56
 Identities = 145/298 (48%), Positives = 173/298 (58%), Gaps = 10/298 (3%)
 Frame = +3

Query: 81  ASSSLVLPSISIKTLVLSKTGRNTXXXXXXXXXXXXXXXXXXXISVSSSFPSNKGCSSSR 260
           ++SSL   S++ +TL+L K    T                    S++ S  S   C SSR
Sbjct: 4   SASSLHFLSLTPQTLLLPKPTSQTTSLSFFSLPPS---------SLNLSLSSPSSCFSSR 54

Query: 261 FVTRVAA-EFDQASSGRD-------ETNFSPDLKIFVGNLPFSVESADLAELFEQSGTVE 416
           FV +V   +FDQ     D       E NFSPDLKIFVGNL FS +SA LAELFE++G VE
Sbjct: 55  FVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVE 114

Query: 417 MVEVIYDKISGRSRGFGFVTMSSTDEVKAAVEQFNGYEIDGRQLRVNSGP-PPPKDDYSS 593
           MVEVIYDK++GRSRGFGFVTMSS +EV+AA +QFNGYE+DGR LRVNSGP P  +++ S 
Sbjct: 115 MVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSF 174

Query: 594 RPPRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQGKVL 773
           R                                                     EQGKV+
Sbjct: 175 RE-------------NSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVV 221

Query: 774 EAKVVYDRETGRSRGFGFVTYGSAEEVQGAIDSLDGADLNGRSIRVSVAEAR-QRRQF 944
           +AKVVYDR++GRSRGFGFVTY SAEEV  AI+SLDG DLNGR+IRVS AEAR  RRQF
Sbjct: 222 DAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279