BLASTX nr result

ID: Papaver23_contig00000837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000837
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing p...   361   1e-97
ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arab...   360   3e-97
ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-contai...   360   4e-97
ref|XP_002315749.1| predicted protein [Populus trichocarpa] gi|2...   357   2e-96
ref|XP_004134119.1| PREDICTED: transmembrane emp24 domain-contai...   357   2e-96

>ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis
           thaliana] gi|75273406|sp|Q9LIL4.1|P24B3_ARATH RecName:
           Full=Transmembrane emp24 domain-containing protein
           p24beta3; AltName: Full=p24 family protein beta2;
           Short=p24beta2; AltName: Full=p24 family protein beta3;
           Short=p24beta3; Flags: Precursor
           gi|11994713|dbj|BAB03029.1| coated vesicle membrane
           protein-like [Arabidopsis thaliana]
           gi|17979492|gb|AAL50082.1| AT3g22845/MWI23_22
           [Arabidopsis thaliana] gi|20147305|gb|AAM10366.1|
           AT3g22845/MWI23_22 [Arabidopsis thaliana]
           gi|332643162|gb|AEE76683.1| emp24/gp25L/p24 family/GOLD
           domain-containing protein [Arabidopsis thaliana]
          Length = 214

 Score =  361 bits (927), Expect = 1e-97
 Identities = 174/217 (80%), Positives = 196/217 (90%), Gaps = 1/217 (0%)
 Frame = -3

Query: 819 MERRRTKMGSMKICLILGF-LLSFVGHISSLSVTVNDMECVYEYVLYEGDTVSGNFVVVD 643
           MERR+ K+    + +++G  LL+ +  ISSLSVTVND ECV EYVLYEGDTVSGNFVVVD
Sbjct: 1   MERRQAKI---HVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVD 57

Query: 642 HDIFWSSDHPGIDFTVTSPGGNVVNSLKGTSGDKFEFKAPRAGMYKFCFHNPYSTPETVS 463
           HDIFW SDHPG+DFTVTSP GN+V +LKGTSGDKFEFKAP++GMYKFCFHNPYSTPETVS
Sbjct: 58  HDIFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNPYSTPETVS 117

Query: 462 FYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDSRHRHTNESTRR 283
           FYIHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD+RHRHTNESTR+
Sbjct: 118 FYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRK 177

Query: 282 RVVFYTILEYLVLCLASGLQVMFIRRLFSKSVAYNRV 172
           RV+FYT+ EY+ L  ASGLQV++IR+LFSKSVAYNRV
Sbjct: 178 RVIFYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214


>ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arabidopsis lyrata subsp.
           lyrata] gi|297329220|gb|EFH59639.1| hypothetical protein
           ARALYDRAFT_479795 [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  360 bits (924), Expect = 3e-97
 Identities = 174/217 (80%), Positives = 195/217 (89%), Gaps = 1/217 (0%)
 Frame = -3

Query: 819 MERRRTKMGSMKICLILGF-LLSFVGHISSLSVTVNDMECVYEYVLYEGDTVSGNFVVVD 643
           MERR+ K+    + +++G  LL+ +  ISSLSVTVND ECV EYVLYEGDTVSGNFVVVD
Sbjct: 1   MERRQAKI---HVFVLIGLILLNSINQISSLSVTVNDEECVQEYVLYEGDTVSGNFVVVD 57

Query: 642 HDIFWSSDHPGIDFTVTSPGGNVVNSLKGTSGDKFEFKAPRAGMYKFCFHNPYSTPETVS 463
           HDIFW SDHPG+DFTVTSP GN+V +LKGTSGDKFEFKAPR+GMYKFCFHNPYSTPETVS
Sbjct: 58  HDIFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPRSGMYKFCFHNPYSTPETVS 117

Query: 462 FYIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDSRHRHTNESTRR 283
           FYIHVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQKYLKARD+RHRHTNESTR+
Sbjct: 118 FYIHVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRK 177

Query: 282 RVVFYTILEYLVLCLASGLQVMFIRRLFSKSVAYNRV 172
           RV+ YT+ EY+ L  ASGLQV++IR+LFSKSVAYNRV
Sbjct: 178 RVILYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214


>ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-containing protein A [Vitis
           vinifera] gi|297737114|emb|CBI26315.3| unnamed protein
           product [Vitis vinifera]
          Length = 215

 Score =  360 bits (923), Expect = 4e-97
 Identities = 176/216 (81%), Positives = 194/216 (89%)
 Frame = -3

Query: 819 MERRRTKMGSMKICLILGFLLSFVGHISSLSVTVNDMECVYEYVLYEGDTVSGNFVVVDH 640
           MERR T   +     I  F  SF+  IS+LSVTVN++ECVYEYV+YEGDTVSGNFVVVDH
Sbjct: 1   MERRHTHRCATGFIFIALFF-SFIHRISALSVTVNEVECVYEYVIYEGDTVSGNFVVVDH 59

Query: 639 DIFWSSDHPGIDFTVTSPGGNVVNSLKGTSGDKFEFKAPRAGMYKFCFHNPYSTPETVSF 460
           DIFW SDHPGIDFTVTSP GN V++LKGTSGDKFEFKAPR+GMYKFCF N Y+TPETVSF
Sbjct: 60  DIFWGSDHPGIDFTVTSPAGNTVHTLKGTSGDKFEFKAPRSGMYKFCFQNSYATPETVSF 119

Query: 459 YIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDSRHRHTNESTRRR 280
           YIHVGHIPNEH+LAKDEHLDPINVKIAELREALESVTAEQKYLKARD+RHRHTNESTR+R
Sbjct: 120 YIHVGHIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRKR 179

Query: 279 VVFYTILEYLVLCLASGLQVMFIRRLFSKSVAYNRV 172
           V+FYT+ EYL+L LASGLQV++IRRLFSKSVAYNRV
Sbjct: 180 VIFYTLGEYLLLALASGLQVVYIRRLFSKSVAYNRV 215


>ref|XP_002315749.1| predicted protein [Populus trichocarpa] gi|222864789|gb|EEF01920.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  357 bits (917), Expect = 2e-96
 Identities = 173/216 (80%), Positives = 193/216 (89%)
 Frame = -3

Query: 819 MERRRTKMGSMKICLILGFLLSFVGHISSLSVTVNDMECVYEYVLYEGDTVSGNFVVVDH 640
           MERRR +     I ++   L+SF+  I SLSVTVND+ECVYEYVLYEGDTVSGNFVVVDH
Sbjct: 1   MERRRKQ-----IYVVAALLMSFISRIYSLSVTVNDVECVYEYVLYEGDTVSGNFVVVDH 55

Query: 639 DIFWSSDHPGIDFTVTSPGGNVVNSLKGTSGDKFEFKAPRAGMYKFCFHNPYSTPETVSF 460
           DIFW SDHPGIDFT TSPG N V+++KGTSGDKFEFKAPR+GMYKFCFHNPY+TPETVSF
Sbjct: 56  DIFWGSDHPGIDFTATSPGDNTVHTVKGTSGDKFEFKAPRSGMYKFCFHNPYATPETVSF 115

Query: 459 YIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDSRHRHTNESTRRR 280
           YIHVGHIP+EHDLAKDEHL+P+NVKIAELREALESVTAEQ+YLKARD RHRHTNESTRRR
Sbjct: 116 YIHVGHIPSEHDLAKDEHLNPVNVKIAELREALESVTAEQRYLKARDIRHRHTNESTRRR 175

Query: 279 VVFYTILEYLVLCLASGLQVMFIRRLFSKSVAYNRV 172
           V+ YT+ EYL+L  AS LQV++IRRLFSKSVAYNRV
Sbjct: 176 VIAYTVGEYLLLAAASTLQVVYIRRLFSKSVAYNRV 211


>ref|XP_004134119.1| PREDICTED: transmembrane emp24 domain-containing protein
           p24beta3-like [Cucumis sativus]
           gi|449504149|ref|XP_004162266.1| PREDICTED:
           transmembrane emp24 domain-containing protein
           p24beta3-like [Cucumis sativus]
          Length = 215

 Score =  357 bits (916), Expect = 2e-96
 Identities = 174/216 (80%), Positives = 194/216 (89%)
 Frame = -3

Query: 819 MERRRTKMGSMKICLILGFLLSFVGHISSLSVTVNDMECVYEYVLYEGDTVSGNFVVVDH 640
           MERR  + G +   L    LLS +  I S+SVTVN++ECVYEYVLYEGD+VSGNFVVVDH
Sbjct: 1   MERRVREKG-LGFLLAAFLLLSLIAGIDSISVTVNEVECVYEYVLYEGDSVSGNFVVVDH 59

Query: 639 DIFWSSDHPGIDFTVTSPGGNVVNSLKGTSGDKFEFKAPRAGMYKFCFHNPYSTPETVSF 460
           DIFW +DHPGI+FTVTSP GNVV+SLK TSGDKFEFKAPR+GMYKFCFHNPYSTPETVSF
Sbjct: 60  DIFWGADHPGIEFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNPYSTPETVSF 119

Query: 459 YIHVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQKYLKARDSRHRHTNESTRRR 280
           YIHVGHIPNEHD AKDEHLDPINVKIAELREALESV +EQKYLKARD+RHRHTNESTR+R
Sbjct: 120 YIHVGHIPNEHDHAKDEHLDPINVKIAELREALESVISEQKYLKARDARHRHTNESTRKR 179

Query: 279 VVFYTILEYLVLCLASGLQVMFIRRLFSKSVAYNRV 172
           V+FYT+ EYL+L +ASGLQV++IRRLFSKSVAYNRV
Sbjct: 180 VIFYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215


Top