BLASTX nr result

ID: Papaver23_contig00000640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000640
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-co...    95   5e-18
ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-co...    95   5e-18
ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca...    95   7e-18
ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu...    94   9e-18
ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17

>ref|XP_003548683.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 971

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/70 (67%), Positives = 52/70 (74%)
 Frame = -2

Query: 212 MNSFSVTRKKTPFQKHXXXXXXXXXXXXXXXXRLYAEFLESFQSDSTPGSKTFVRGGTIN 33
           M+SFS+TRKKTPFQKH                RLYAEF+ESFQ D+TPGSKTFVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTIN 60

Query: 32  PNDKLKNDSE 3
           PNDK K+DSE
Sbjct: 61  PNDKFKDDSE 70


>ref|XP_003531944.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
           [Glycine max]
          Length = 972

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/70 (67%), Positives = 52/70 (74%)
 Frame = -2

Query: 212 MNSFSVTRKKTPFQKHXXXXXXXXXXXXXXXXRLYAEFLESFQSDSTPGSKTFVRGGTIN 33
           M+SFS+TRKKTPFQKH                RLYAEF+ESFQ D+TPGSKTFVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDTTPGSKTFVRGGTIN 60

Query: 32  PNDKLKNDSE 3
           PNDK K+DSE
Sbjct: 61  PNDKFKDDSE 70


>ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula]
           gi|355522973|gb|AET03427.1| U2-associated protein SR140
           [Medicago truncatula]
          Length = 1139

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/70 (67%), Positives = 52/70 (74%)
 Frame = -2

Query: 212 MNSFSVTRKKTPFQKHXXXXXXXXXXXXXXXXRLYAEFLESFQSDSTPGSKTFVRGGTIN 33
           M+SFS+TRKKTPFQKH                RLYAEF+ESFQ D+ PGSKTFVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTIN 60

Query: 32  PNDKLKNDSE 3
           PNDKLK+DSE
Sbjct: 61  PNDKLKDDSE 70


>ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis]
           gi|223545356|gb|EEF46861.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 979

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/70 (67%), Positives = 51/70 (72%)
 Frame = -2

Query: 212 MNSFSVTRKKTPFQKHXXXXXXXXXXXXXXXXRLYAEFLESFQSDSTPGSKTFVRGGTIN 33
           M+SFS+TRKKTPFQKH                RLYAEF+ESFQ D+ PGSKTFVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKREDDETARLYAEFVESFQGDNAPGSKTFVRGGTIN 60

Query: 32  PNDKLKNDSE 3
           PNDKLK DSE
Sbjct: 61  PNDKLKTDSE 70


>ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1|
           predicted protein [Populus trichocarpa]
          Length = 988

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/70 (64%), Positives = 52/70 (74%)
 Frame = -2

Query: 212 MNSFSVTRKKTPFQKHXXXXXXXXXXXXXXXXRLYAEFLESFQSDSTPGSKTFVRGGTIN 33
           M+SFS+TRKKTPFQKH                RLYAEF+ESFQ D+ PGSKTFVRGGTIN
Sbjct: 1   MSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDNAPGSKTFVRGGTIN 60

Query: 32  PNDKLKNDSE 3
           PN+KLK+D+E
Sbjct: 61  PNEKLKSDAE 70


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