BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000575
         (1081 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02585.1|UCRIB_TOBAC RecName: Full=Cytochrome b6-f complex ir...   178   2e-42
gb|AFK33315.1| unknown [Lotus japonicus]                              176   9e-42
sp|P08980.2|UCRIA_SPIOL RecName: Full=Cytochrome b6-f complex ir...   176   1e-41
sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex ir...   176   1e-41
pdb|1RFS|A Chain A, Rieske Soluble Fragment From Spinach              176   1e-41

>sp|Q02585.1|UCRIB_TOBAC RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 2,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 2; AltName: Full=Rieske iron-sulfur
           protein 2; Short=ISP 2; Short=RISP 2; Flags: Precursor
           gi|19997|emb|CAA46809.1| Rieske FeS [Nicotiana tabacum]
          Length = 228

 Score =  178 bits (451), Expect = 2e-42
 Identities = 80/87 (91%), Positives = 83/87 (95%)
 Frame = +2

Query: 527 VENDKTLATYGINAVCTHLGCVVPFNANEKKFICPCHGSQYNNQGKVVRGPAPLSLALAH 706
           VEND TLATYGINAVCTHLGCVVPFNA E KFICPCHGSQYNNQG+VVRGPAPLSLALAH
Sbjct: 142 VENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 201

Query: 707 ADVVDGKVVFVPWVETDFRTGEAPWWS 787
           AD+ DGKVVFVPWVETDFRTGEAPWW+
Sbjct: 202 ADIDDGKVVFVPWVETDFRTGEAPWWA 228



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 40/92 (43%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
 Frame = +3

Query: 138 MVASTLSPATLSQVCSG-NGMFSPSQA---KPTRTQL--MVKERGTKIICQASSIPAEN- 296
           M +STLSP T  Q+CS  +G+ S SQ    KP +     + K++  K+ C A+SIPA++ 
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLLKPMKINSHGLGKDKRMKVKCMATSIPADDR 58

Query: 297 VPDMGKREXXXXXXXXXXXXPTAGMLVPYGSF 392
           VPDM KR             PTAGMLVPY +F
Sbjct: 59  VPDMEKRNLMNLLLLGALSLPTAGMLVPYATF 90


>gb|AFK33315.1| unknown [Lotus japonicus]
          Length = 227

 Score =  176 bits (446), Expect = 9e-42
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +2

Query: 527 VENDKTLATYGINAVCTHLGCVVPFNANEKKFICPCHGSQYNNQGKVVRGPAPLSLALAH 706
           VE D+TLATYGINAVCTHLGCVVPFN  EKKFICPCHGSQYN+QG+VVRGPAPLSLALAH
Sbjct: 141 VEKDRTLATYGINAVCTHLGCVVPFNTAEKKFICPCHGSQYNDQGRVVRGPAPLSLALAH 200

Query: 707 ADVVDGKVVFVPWVETDFRTGEAPWWS 787
            DVVDGKVVFVPWVETDFRTG+APWW+
Sbjct: 201 CDVVDGKVVFVPWVETDFRTGDAPWWA 227



 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 45/89 (50%), Positives = 59/89 (66%), Gaps = 4/89 (4%)
 Frame = +3

Query: 138 MVASTLSPATLSQVCSG-NGMFSPSQA---KPTRTQLMVKERGTKIICQASSIPAENVPD 305
           M ++TLSP T SQ+CSG +G+F PSQA   KP R Q++ K +G +I C A+SIPA+ VPD
Sbjct: 1   MSSTTLSPVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKAKGIRIACMATSIPADRVPD 60

Query: 306 MGKREXXXXXXXXXXXXPTAGMLVPYGSF 392
           M KR+            P+AGMLVPY +F
Sbjct: 61  MEKRKLLNLLLLGAISLPSAGMLVPYATF 89


>sp|P08980.2|UCRIA_SPIOL RecName: Full=Cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein; AltName: Full=Rieske iron-sulfur
           protein; Short=ISP; Short=RISP; Flags: Precursor
          Length = 230

 Score =  176 bits (445), Expect = 1e-41
 Identities = 79/87 (90%), Positives = 82/87 (94%)
 Frame = +2

Query: 527 VENDKTLATYGINAVCTHLGCVVPFNANEKKFICPCHGSQYNNQGKVVRGPAPLSLALAH 706
           VE+DKTLAT+GINAVCTHLGCVVPFNA E KFICPCHGSQYNNQG+VVRGPAPLSLALAH
Sbjct: 143 VESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 202

Query: 707 ADVVDGKVVFVPWVETDFRTGEAPWWS 787
            DV DGKVVFVPW ETDFRTGEAPWWS
Sbjct: 203 CDVDDGKVVFVPWTETDFRTGEAPWWS 229



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 45/91 (49%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
 Frame = +3

Query: 138 MVASTLSPATLSQVCSG-NGMFSPSQA--KPTRTQLMVKE---RGTKIICQASSIPAENV 299
           M + TLS AT SQ+CS  NGMF+PS A  K  R  +++ +   RG K+ CQA+SIPA+NV
Sbjct: 1   MASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60

Query: 300 PDMGKREXXXXXXXXXXXXPTAGMLVPYGSF 392
           PDM KRE            PT  ML+PY SF
Sbjct: 61  PDMQKRETLNLLLLGALSLPTGYMLLPYASF 91


>sp|P30361.2|UCRIA_TOBAC RecName: Full=Cytochrome b6-f complex iron-sulfur subunit 1,
           chloroplastic; AltName:
           Full=Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein 1; AltName: Full=Rieske iron-sulfur
           protein 1; Short=ISP 1; Short=RISP 1; Flags: Precursor
           gi|19995|emb|CAA46808.1| Rieske FeS [Nicotiana tabacum]
          Length = 228

 Score =  176 bits (445), Expect = 1e-41
 Identities = 79/87 (90%), Positives = 82/87 (94%)
 Frame = +2

Query: 527 VENDKTLATYGINAVCTHLGCVVPFNANEKKFICPCHGSQYNNQGKVVRGPAPLSLALAH 706
           VEND TLATYGINAVCTHLGCVVPFNA E KFICPCHGSQYNNQG+VVRGPAPLSLALAH
Sbjct: 142 VENDGTLATYGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 201

Query: 707 ADVVDGKVVFVPWVETDFRTGEAPWWS 787
           AD+ DGKVVFVPWVETDFRTGE PWW+
Sbjct: 202 ADIDDGKVVFVPWVETDFRTGEDPWWA 228



 Score = 60.1 bits (144), Expect = 9e-07
 Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
 Frame = +3

Query: 138 MVASTLSPATLSQVCSG-NGMFSPSQA---KPTRTQL--MVKERGTKIICQASSIPAEN- 296
           M +STLSP T  Q+CS  +G+ S SQ    KP +     + K++  K+ C A+SIPA++ 
Sbjct: 1   MASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMKINSHGLGKDKRMKVKCMATSIPADDR 58

Query: 297 VPDMGKREXXXXXXXXXXXXPTAGMLVPYGSF 392
           VPDM KR             PTAGMLVPYG+F
Sbjct: 59  VPDMEKRNLMNLLLLGALSLPTAGMLVPYGTF 90


>pdb|1RFS|A Chain A, Rieske Soluble Fragment From Spinach
          Length = 139

 Score =  176 bits (445), Expect = 1e-41
 Identities = 79/87 (90%), Positives = 82/87 (94%)
 Frame = +2

Query: 527 VENDKTLATYGINAVCTHLGCVVPFNANEKKFICPCHGSQYNNQGKVVRGPAPLSLALAH 706
           VE+DKTLAT+GINAVCTHLGCVVPFNA E KFICPCHGSQYNNQG+VVRGPAPLSLALAH
Sbjct: 52  VESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHGSQYNNQGRVVRGPAPLSLALAH 111

Query: 707 ADVVDGKVVFVPWVETDFRTGEAPWWS 787
            DV DGKVVFVPW ETDFRTGEAPWWS
Sbjct: 112 CDVDDGKVVFVPWTETDFRTGEAPWWS 138