BLASTX nr result
ID: Papaver23_contig00000552
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00000552
(1293 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P21241.1|RUBB_BRANA RecName: Full=RuBisCO large subunit-bindi... 562 e-158
ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro... 560 e-157
ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata] gi... 558 e-157
ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding pro... 558 e-157
ref|NP_175945.1| RuBisCO large subunit-binding protein subunit b... 558 e-157
>sp|P21241.1|RUBB_BRANA RecName: Full=RuBisCO large subunit-binding protein subunit beta,
chloroplastic; AltName: Full=60 kDa chaperonin subunit
beta; AltName: Full=CPN-60 beta; Flags: Precursor
gi|167117|gb|AAA32980.1| 60-kDa beta-polypeptide of
plastid chaperonin-60 precursor [Brassica napus]
Length = 588
Score = 562 bits (1448), Expect = e-158
Identities = 297/335 (88%), Positives = 312/335 (93%)
Frame = -3
Query: 1291 KLMSKEVEDSELADVAAVSAGNNLEVGQMIAEAMSRVGRKGVVTLEEGKSSENFLYVVEG 1112
K MSKEVEDSELADVAAVSAGNN E+G MIAEAMSRVGRKGVVTLEEGKS+EN LYVVEG
Sbjct: 187 KKMSKEVEDSELADVAAVSAGNNAEIGSMIAEAMSRVGRKGVVTLEEGKSAENALYVVEG 246
Query: 1111 MQFDRGYISPYFVTDSEKMTVEFENCKLLLVDKKISNARDLIGVLEEAIRGGYPILIIAE 932
MQFDRGY+SPYFVTDSEKM+VEF+NCKLLLVDKKI+NARDL+GVLE+AIRGGYPILIIAE
Sbjct: 247 MQFDRGYVSPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILIIAE 306
Query: 931 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA 752
DIEQEALATLVVNKLRG LKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA
Sbjct: 307 DIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA 366
Query: 751 DSEVLGHASKVVLTKETTTIVGDGSTQDAVDKRVAQIRNLIEVAEQDYEKEKLNERVAKL 572
EVLGHA+KVVLTKET+TIVGDGSTQDAV KRV QI+NLIE AEQDYEKEKLNER+AKL
Sbjct: 367 GKEVLGHAAKVVLTKETSTIVGDGSTQDAVQKRVTQIKNLIEQAEQDYEKEKLNERIAKL 426
Query: 571 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLASKVDAIKLT 392
SGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCTLLRLASKVDAIK
Sbjct: 427 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAA 486
Query: 391 LDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 287
LDNDE+KVGA+IV+RAL YPLKLIAKNAG NGSVV
Sbjct: 487 LDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVV 521
Score = 59.7 bits (143), Expect = 2e-06
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = -2
Query: 125 TKVVRCCLEHAASVARTFLTSDVVVVDIKEPE 30
TKVVRCCLEHAASVA+TFL SD VVV+IKEPE
Sbjct: 554 TKVVRCCLEHAASVAKTFLMSDCVVVEIKEPE 585
>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297746501|emb|CBI16557.3| unnamed protein product
[Vitis vinifera]
Length = 608
Score = 560 bits (1444), Expect = e-157
Identities = 297/335 (88%), Positives = 315/335 (94%)
Frame = -3
Query: 1291 KLMSKEVEDSELADVAAVSAGNNLEVGQMIAEAMSRVGRKGVVTLEEGKSSENFLYVVEG 1112
KL+SKEVEDSELADVAAVSAGNN EVG MIAEAMS+VGRKGVVTLEEGKS+EN LYVVEG
Sbjct: 195 KLISKEVEDSELADVAAVSAGNNHEVGNMIAEAMSKVGRKGVVTLEEGKSAENHLYVVEG 254
Query: 1111 MQFDRGYISPYFVTDSEKMTVEFENCKLLLVDKKISNARDLIGVLEEAIRGGYPILIIAE 932
MQFDRGYISPYFVTDSEKM VEFENCKLLLVDKKI+NARDLI VLE+AIRGGYPILIIAE
Sbjct: 255 MQFDRGYISPYFVTDSEKMAVEFENCKLLLVDKKITNARDLINVLEDAIRGGYPILIIAE 314
Query: 931 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA 752
DIEQEALATLVVNKLRG+LKIAALKAPGFGERKSQYLDDIAILTG TVIR+EVGL+LDKA
Sbjct: 315 DIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIRDEVGLTLDKA 374
Query: 751 DSEVLGHASKVVLTKETTTIVGDGSTQDAVDKRVAQIRNLIEVAEQDYEKEKLNERVAKL 572
+ EVLGHA+KVVLTK+TTTIVGDGSTQ+AV+KRVAQIRNLIE AEQ+YEKEKLNER+AKL
Sbjct: 375 EKEVLGHAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLIEAAEQEYEKEKLNERIAKL 434
Query: 571 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLASKVDAIKLT 392
SGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCTLLRLASKVDAIK T
Sbjct: 435 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDT 494
Query: 391 LDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 287
LDNDE+KVGA+IV+RAL YPLKLIAKNAG NGSVV
Sbjct: 495 LDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVV 529
Score = 65.5 bits (158), Expect = 3e-08
Identities = 32/42 (76%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = -2
Query: 125 TKVVRCCLEHAASVARTFLTSDVVVVDIKEPEAALV-NPMDN 3
TKVVRCCLEHA+SVA+TFL SD VVV+IKEPE + NPMDN
Sbjct: 562 TKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPVVAGNPMDN 603
>ref|XP_002894506.1| CPN60B [Arabidopsis lyrata subsp. lyrata] gi|297340348|gb|EFH70765.1|
CPN60B [Arabidopsis lyrata subsp. lyrata]
Length = 600
Score = 558 bits (1439), Expect = e-157
Identities = 297/335 (88%), Positives = 313/335 (93%)
Frame = -3
Query: 1291 KLMSKEVEDSELADVAAVSAGNNLEVGQMIAEAMSRVGRKGVVTLEEGKSSENFLYVVEG 1112
K MSKEVEDSELADVAAVSAGNN E+G MIAEAMS+VGRKGVVTLEEGKS+EN LYVVEG
Sbjct: 187 KKMSKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEG 246
Query: 1111 MQFDRGYISPYFVTDSEKMTVEFENCKLLLVDKKISNARDLIGVLEEAIRGGYPILIIAE 932
MQFDRGYISPYFVTDSEKM+VEF+NCKLLLVDKKI+NARDL+GVLE+AIRGGYPILIIAE
Sbjct: 247 MQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILIIAE 306
Query: 931 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA 752
DIEQEALATLVVNKLRG LKIAAL+APGFGERKSQYLDDIAILTGATVIREEVGLSLDKA
Sbjct: 307 DIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA 366
Query: 751 DSEVLGHASKVVLTKETTTIVGDGSTQDAVDKRVAQIRNLIEVAEQDYEKEKLNERVAKL 572
EVLG+ASKVVLTKET+TIVGDGSTQDAV KRV QI+NLIE AEQDYEKEKLNER+AKL
Sbjct: 367 GKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAEQDYEKEKLNERIAKL 426
Query: 571 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLASKVDAIKLT 392
SGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCTLLRLASKVDAIK T
Sbjct: 427 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAT 486
Query: 391 LDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 287
LDNDE+KVGA+IV+RAL YPLKLIAKNAG NGSVV
Sbjct: 487 LDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVV 521
Score = 66.6 bits (161), Expect = 1e-08
Identities = 34/42 (80%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = -2
Query: 125 TKVVRCCLEHAASVARTFLTSDVVVVDIKEPEAALV-NPMDN 3
TKVVRCCLEHAASVA+TFL SD VVV+IKEPE V NPMDN
Sbjct: 554 TKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDN 595
>ref|XP_002284134.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
chloroplastic [Vitis vinifera]
gi|297743227|emb|CBI36094.3| unnamed protein product
[Vitis vinifera]
Length = 609
Score = 558 bits (1439), Expect = e-157
Identities = 295/336 (87%), Positives = 315/336 (93%)
Frame = -3
Query: 1291 KLMSKEVEDSELADVAAVSAGNNLEVGQMIAEAMSRVGRKGVVTLEEGKSSENFLYVVEG 1112
KLMSKEVEDSELADVAAVSAGNN EVG MIAEAM +VGRKGVVTLEEGKS+EN LYVVEG
Sbjct: 196 KLMSKEVEDSELADVAAVSAGNNYEVGYMIAEAMGQVGRKGVVTLEEGKSAENNLYVVEG 255
Query: 1111 MQFDRGYISPYFVTDSEKMTVEFENCKLLLVDKKISNARDLIGVLEEAIRGGYPILIIAE 932
MQFDRGYISPYFVTDSEKM VE+ENCKLLLVDKKI+NARDLI VLE+AI+GGYPILIIAE
Sbjct: 256 MQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINVLEDAIKGGYPILIIAE 315
Query: 931 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA 752
DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTG TVIREEVGLSLDKA
Sbjct: 316 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKA 375
Query: 751 DSEVLGHASKVVLTKETTTIVGDGSTQDAVDKRVAQIRNLIEVAEQDYEKEKLNERVAKL 572
+ EVLGHA+KVVLTK+TTTIVGDGSTQ+AV+KRVAQIRNL+E A+QDYEKEKLNER+AKL
Sbjct: 376 EKEVLGHAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIRNLVEAADQDYEKEKLNERIAKL 435
Query: 571 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLASKVDAIKLT 392
SGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCTLLRLA+KVDAIK T
Sbjct: 436 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIKDT 495
Query: 391 LDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVVM 284
LD+DEQKVGA+IV+RAL YP+KLIAKNAG NGSVV+
Sbjct: 496 LDSDEQKVGADIVKRALSYPMKLIAKNAGVNGSVVI 531
Score = 70.1 bits (170), Expect = 1e-09
Identities = 36/42 (85%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = -2
Query: 125 TKVVRCCLEHAASVARTFLTSDVVVVDIKEPEAALV-NPMDN 3
TKVVRCCLEHAASVARTFLTSD VVVDIKEPE NPMDN
Sbjct: 563 TKVVRCCLEHAASVARTFLTSDAVVVDIKEPEPIPAGNPMDN 604
>ref|NP_175945.1| RuBisCO large subunit-binding protein subunit beta [Arabidopsis
thaliana] gi|30695947|ref|NP_849811.1| RuBisCO large
subunit-binding protein subunit beta [Arabidopsis
thaliana] gi|27735252|sp|P21240.3|CPNB1_ARATH RecName:
Full=Chaperonin 60 subunit beta 1, chloroplastic;
Short=CPN-60 beta 1; AltName: Full=60 kDa chaperonin
subunit beta 1; AltName: Full=RuBisCO large
subunit-binding protein subunit beta, chloroplastic;
Flags: Precursor gi|14423416|gb|AAK62390.1|AF386945_1
Rubisco subunit binding-protein beta subunit [Arabidopsis
thaliana] gi|4204266|gb|AAD10647.1| Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
gi|20148345|gb|AAM10063.1| Rubisco subunit
binding-protein beta subunit [Arabidopsis thaliana]
gi|222423239|dbj|BAH19596.1| AT1G55490 [Arabidopsis
thaliana] gi|332195130|gb|AEE33251.1| RuBisCO large
subunit-binding protein subunit beta [Arabidopsis
thaliana] gi|332195131|gb|AEE33252.1| RuBisCO large
subunit-binding protein subunit beta [Arabidopsis
thaliana]
Length = 600
Score = 558 bits (1439), Expect = e-157
Identities = 297/335 (88%), Positives = 313/335 (93%)
Frame = -3
Query: 1291 KLMSKEVEDSELADVAAVSAGNNLEVGQMIAEAMSRVGRKGVVTLEEGKSSENFLYVVEG 1112
K MSKEVEDSELADVAAVSAGNN E+G MIAEAMS+VGRKGVVTLEEGKS+EN LYVVEG
Sbjct: 187 KKMSKEVEDSELADVAAVSAGNNDEIGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEG 246
Query: 1111 MQFDRGYISPYFVTDSEKMTVEFENCKLLLVDKKISNARDLIGVLEEAIRGGYPILIIAE 932
MQFDRGYISPYFVTDSEKM+VEF+NCKLLLVDKKI+NARDL+GVLE+AIRGGYPILIIAE
Sbjct: 247 MQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILIIAE 306
Query: 931 DIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA 752
DIEQEALATLVVNKLRG LKIAAL+APGFGERKSQYLDDIAILTGATVIREEVGLSLDKA
Sbjct: 307 DIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVGLSLDKA 366
Query: 751 DSEVLGHASKVVLTKETTTIVGDGSTQDAVDKRVAQIRNLIEVAEQDYEKEKLNERVAKL 572
EVLG+ASKVVLTKET+TIVGDGSTQDAV KRV QI+NLIE AEQDYEKEKLNER+AKL
Sbjct: 367 GKEVLGNASKVVLTKETSTIVGDGSTQDAVKKRVTQIKNLIEQAEQDYEKEKLNERIAKL 426
Query: 571 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXGCTLLRLASKVDAIKLT 392
SGGVAVIQVGAQTETELKEKKLRVEDALNATKAA GCTLLRLASKVDAIK T
Sbjct: 427 SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKAT 486
Query: 391 LDNDEQKVGAEIVRRALCYPLKLIAKNAGDNGSVV 287
LDNDE+KVGA+IV+RAL YPLKLIAKNAG NGSVV
Sbjct: 487 LDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVV 521
Score = 66.6 bits (161), Expect = 1e-08
Identities = 34/42 (80%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
Frame = -2
Query: 125 TKVVRCCLEHAASVARTFLTSDVVVVDIKEPEAALV-NPMDN 3
TKVVRCCLEHAASVA+TFL SD VVV+IKEPE V NPMDN
Sbjct: 554 TKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDN 595