BLASTX nr result

ID: Papaver23_contig00000493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000493
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vi...   412   e-113
ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cu...   409   e-112
emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]   407   e-111
gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]        395   e-108
ref|NP_565463.1| large subunit ribosomal protein L4 [Arabidopsis...   394   e-107

>ref|XP_003634850.1| PREDICTED: 50S ribosomal protein L4-like [Vitis vinifera]
           gi|297741766|emb|CBI32995.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  412 bits (1058), Expect = e-113
 Identities = 208/273 (76%), Positives = 236/273 (86%), Gaps = 1/273 (0%)
 Frame = -1

Query: 818 KESAFDSSQICKGMISSFIANRGFSTT-ISTPQSCEGPIPAELLTSKSVLTSDHKQGLYQ 642
           ++  F +   CK   SSF+++R  STT I TP+S     P ELL++K+VLT +   G YQ
Sbjct: 44  QDGLFSTDSSCKTG-SSFLSSRSLSTTTILTPESSGVAFPPELLSTKTVLTPERTPGHYQ 102

Query: 641 DCLFPVTNFHNEEKGFMRLAGDVFDVPIRKDIVHRVVKWQLANRRQGTHSTKTISEVSGT 462
           D + PVTNFHNE+KGFM LAGDVFDVPIRKDIVHRVV+WQLA R+QGTHSTKTISEVSGT
Sbjct: 103 DLVIPVTNFHNEDKGFMVLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGT 162

Query: 461 GRKPWPQKGTGRARHGSLRGPQFRHGATMHGPKPRSYAMKLQKKVRRLGLKCALSARMAE 282
           GRKPW QKGTGRARHG+LRGPQFR GA MHGPKPRS+A+KL KKVRRLGLK ALSAR AE
Sbjct: 163 GRKPWRQKGTGRARHGTLRGPQFRGGAIMHGPKPRSHAIKLNKKVRRLGLKIALSARTAE 222

Query: 281 GKLLVFDDLEIPTHKTKHIVNCVQQMENSKKVLIVDGGPIDEKLKLATQNLHYVNVLPSI 102
           GKLLVFDDLE+P+HKTK+IVN V++MEN+KK+L+VDGGPI EKLKLATQNLHYVNVLPSI
Sbjct: 223 GKLLVFDDLEVPSHKTKNIVNYVKEMENTKKLLLVDGGPITEKLKLATQNLHYVNVLPSI 282

Query: 101 GLNVYSILQHDTLVMSRDAVDRIVERMHTPINR 3
           GLNVYSIL HDTLVMSRDAV++IVERMHTPINR
Sbjct: 283 GLNVYSILLHDTLVMSRDAVNKIVERMHTPINR 315


>ref|XP_004134779.1| PREDICTED: 50S ribosomal protein L4-like [Cucumis sativus]
           gi|449531047|ref|XP_004172499.1| PREDICTED: 50S
           ribosomal protein L4-like [Cucumis sativus]
          Length = 315

 Score =  409 bits (1052), Expect = e-112
 Identities = 200/256 (78%), Positives = 227/256 (88%)
 Frame = -1

Query: 770 SFIANRGFSTTISTPQSCEGPIPAELLTSKSVLTSDHKQGLYQDCLFPVTNFHNEEKGFM 591
           SF+A+RGF T+I TP+S     P+ELL++K V + + K GLYQD + PVTNF NE+KGFM
Sbjct: 60  SFLASRGFCTSILTPESSNNAFPSELLSAKPVASEERKIGLYQDLMIPVTNFENEDKGFM 119

Query: 590 RLAGDVFDVPIRKDIVHRVVKWQLANRRQGTHSTKTISEVSGTGRKPWPQKGTGRARHGS 411
            LAGDVFD+PIRKDI+HRVV+WQLA R+QGTHSTKTISEVSGTGRKPW QKGTGRARHG+
Sbjct: 120 VLAGDVFDLPIRKDIIHRVVRWQLAKRQQGTHSTKTISEVSGTGRKPWKQKGTGRARHGT 179

Query: 410 LRGPQFRHGATMHGPKPRSYAMKLQKKVRRLGLKCALSARMAEGKLLVFDDLEIPTHKTK 231
           LRGPQFR GATMHGPKPRS+A KL KKVRRLGL  ALSAR+AEGKLLVFD+L++ THKTK
Sbjct: 180 LRGPQFRGGATMHGPKPRSHAFKLNKKVRRLGLMIALSARVAEGKLLVFDNLDVTTHKTK 239

Query: 230 HIVNCVQQMENSKKVLIVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILQHDTLVMSR 51
           ++V  V +MEN+KKVL+VDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSIL HDTLVMSR
Sbjct: 240 NMVKYVSKMENTKKVLLVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVMSR 299

Query: 50  DAVDRIVERMHTPINR 3
           DAV+RIV RMHTPINR
Sbjct: 300 DAVERIVTRMHTPINR 315


>emb|CAN77922.1| hypothetical protein VITISV_027648 [Vitis vinifera]
          Length = 278

 Score =  407 bits (1046), Expect = e-111
 Identities = 202/258 (78%), Positives = 229/258 (88%), Gaps = 1/258 (0%)
 Frame = -1

Query: 773 SSFIANRGFSTT-ISTPQSCEGPIPAELLTSKSVLTSDHKQGLYQDCLFPVTNFHNEEKG 597
           SSF+++R  STT + TP+S     P ELL++K+VLT +   G YQD + PVTNFHNE+KG
Sbjct: 21  SSFLSSRSLSTTTMLTPESSGVAFPPELLSTKTVLTPERTPGHYQDLVIPVTNFHNEDKG 80

Query: 596 FMRLAGDVFDVPIRKDIVHRVVKWQLANRRQGTHSTKTISEVSGTGRKPWPQKGTGRARH 417
           FM LAGDVFDVPIRKDIVHRVV+WQLA R+QGTHSTKTISEVSGTG+KPW QKGTGRARH
Sbjct: 81  FMXLAGDVFDVPIRKDIVHRVVRWQLAKRQQGTHSTKTISEVSGTGKKPWRQKGTGRARH 140

Query: 416 GSLRGPQFRHGATMHGPKPRSYAMKLQKKVRRLGLKCALSARMAEGKLLVFDDLEIPTHK 237
           G+LRGPQFR GA MHGPKPRS+A+KL KKVRRLGLK ALSAR AEGKLLVFDDLE+P+HK
Sbjct: 141 GTLRGPQFRGGAIMHGPKPRSHAIKLNKKVRRLGLKIALSARTAEGKLLVFDDLEVPSHK 200

Query: 236 TKHIVNCVQQMENSKKVLIVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILQHDTLVM 57
           TK+IVN V++MEN KK+L+VDGGPI EKLKLATQNLHYVNVLPSIGLNVYSIL HDTLVM
Sbjct: 201 TKNIVNYVKEMENXKKLLLVDGGPITEKLKLATQNLHYVNVLPSIGLNVYSILLHDTLVM 260

Query: 56  SRDAVDRIVERMHTPINR 3
           SR+AV++IVERMHTPINR
Sbjct: 261 SRBAVNKIVERMHTPINR 278


>gb|AAM62769.1| 50S ribosomal protein L4 [Arabidopsis thaliana]
          Length = 300

 Score =  395 bits (1016), Expect = e-108
 Identities = 194/256 (75%), Positives = 222/256 (86%)
 Frame = -1

Query: 770 SFIANRGFSTTISTPQSCEGPIPAELLTSKSVLTSDHKQGLYQDCLFPVTNFHNEEKGFM 591
           + ++NR  ST+I TP   +   P++LLT K+VLT D   G YQD + PVTNF NEEKGFM
Sbjct: 48  ALLSNRKLSTSILTP---DDSFPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFM 104

Query: 590 RLAGDVFDVPIRKDIVHRVVKWQLANRRQGTHSTKTISEVSGTGRKPWPQKGTGRARHGS 411
            LAGDVFDVPIRKDI+H VV+WQLA R+QGTHSTKT+SEVSGTGRKPW QKGTGRARHG+
Sbjct: 105 VLAGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGT 164

Query: 410 LRGPQFRHGATMHGPKPRSYAMKLQKKVRRLGLKCALSARMAEGKLLVFDDLEIPTHKTK 231
           LRGPQFR G  MHGPKPRS+A+K+ K+VRRLGLK AL+AR AEGKLLVFDDL +PTHKTK
Sbjct: 165 LRGPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGLPTHKTK 224

Query: 230 HIVNCVQQMENSKKVLIVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILQHDTLVMSR 51
           +IVN   QMEN+KKVL+V+GGPIDEKLKLATQNLHYVN++PSIGLNVYSIL HDTLVMSR
Sbjct: 225 NIVNYYNQMENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLVMSR 284

Query: 50  DAVDRIVERMHTPINR 3
           DAV++IVERMHTPINR
Sbjct: 285 DAVNKIVERMHTPINR 300


>ref|NP_565463.1| large subunit ribosomal protein L4 [Arabidopsis thaliana]
           gi|18252969|gb|AAL62411.1| 50S ribosomal protein L4
           [Arabidopsis thaliana] gi|20197568|gb|AAD24390.2| 50S
           ribosomal protein L4 [Arabidopsis thaliana]
           gi|25084070|gb|AAN72167.1| 50S ribosomal protein L4
           [Arabidopsis thaliana] gi|330251866|gb|AEC06960.1| large
           subunit ribosomal protein L4 [Arabidopsis thaliana]
          Length = 300

 Score =  394 bits (1013), Expect = e-107
 Identities = 193/256 (75%), Positives = 222/256 (86%)
 Frame = -1

Query: 770 SFIANRGFSTTISTPQSCEGPIPAELLTSKSVLTSDHKQGLYQDCLFPVTNFHNEEKGFM 591
           + ++NR  ST+I TP   +   P++LLT K+VLT D   G YQD + PVTNF NEEKGFM
Sbjct: 48  ALLSNRKLSTSILTP---DDSFPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFM 104

Query: 590 RLAGDVFDVPIRKDIVHRVVKWQLANRRQGTHSTKTISEVSGTGRKPWPQKGTGRARHGS 411
            LAGDVFDVPIRKDI+H VV+WQLA R+QGTHSTKT+SEVSGTGRKPW QKGTGRARHG+
Sbjct: 105 VLAGDVFDVPIRKDIIHNVVRWQLAKRQQGTHSTKTLSEVSGTGRKPWNQKGTGRARHGT 164

Query: 410 LRGPQFRHGATMHGPKPRSYAMKLQKKVRRLGLKCALSARMAEGKLLVFDDLEIPTHKTK 231
           LRGPQFR G  MHGPKPRS+A+K+ K+VRRLGLK AL+AR AEGKLLVFDDL +PTHKTK
Sbjct: 165 LRGPQFRGGCVMHGPKPRSHAIKMNKQVRRLGLKIALTARAAEGKLLVFDDLGLPTHKTK 224

Query: 230 HIVNCVQQMENSKKVLIVDGGPIDEKLKLATQNLHYVNVLPSIGLNVYSILQHDTLVMSR 51
           +IVN   QMEN+KKVL+V+GGPIDEKLKLATQNLHYVN++PSIGLNVYSIL HDTL+MSR
Sbjct: 225 NIVNYYNQMENTKKVLVVEGGPIDEKLKLATQNLHYVNIIPSIGLNVYSILLHDTLLMSR 284

Query: 50  DAVDRIVERMHTPINR 3
           DAV++IVERMHTPINR
Sbjct: 285 DAVNKIVERMHTPINR 300


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