BLASTX nr result

ID: Papaver23_contig00000478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000478
         (1333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19935.3| unnamed protein product [Vitis vinifera]              335   1e-89
ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform...   335   1e-89
ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays] gi|195...   330   7e-88
ref|NP_175056.1| Ras-related protein Rab-18 [Arabidopsis thalian...   329   9e-88
ref|XP_002893966.1| hypothetical protein ARALYDRAFT_473785 [Arab...   329   9e-88

>emb|CBI19935.3| unnamed protein product [Vitis vinifera]
          Length = 307

 Score =  335 bits (860), Expect = 1e-89
 Identities = 167/200 (83%), Positives = 181/200 (90%)
 Frame = -1

Query: 1123 SNSSQPDFDYLFKLLMIGDSGVGKXXXXXSFTSDTFEDLSPTIGVDFXXXXXXXXXXXXX 944
            S+SSQP+FDYLFKLL+IGDSGVGK     SFTS+TFEDLSPTIGVDF             
Sbjct: 101  SSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLK 160

Query: 943  LAIWDTAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLADVWAKEIDLYSTNQDCIK 764
            LAIWDTAGQERFRTLTSSYYRGAQGVI+VYDVTRR+TFTNL+D+WAKEIDLYSTNQDCIK
Sbjct: 161  LAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIK 220

Query: 763  MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLV 584
            MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPSL+
Sbjct: 221  MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLL 280

Query: 583  AEGSAGGKKNIFKQKPPQTD 524
            AEGS+G +KNIFKQKPP++D
Sbjct: 281  AEGSSGVRKNIFKQKPPESD 300


>ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
            gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related
            protein RABC1 [Vitis vinifera]
          Length = 211

 Score =  335 bits (860), Expect = 1e-89
 Identities = 167/200 (83%), Positives = 181/200 (90%)
 Frame = -1

Query: 1123 SNSSQPDFDYLFKLLMIGDSGVGKXXXXXSFTSDTFEDLSPTIGVDFXXXXXXXXXXXXX 944
            S+SSQP+FDYLFKLL+IGDSGVGK     SFTS+TFEDLSPTIGVDF             
Sbjct: 5    SSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLK 64

Query: 943  LAIWDTAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLADVWAKEIDLYSTNQDCIK 764
            LAIWDTAGQERFRTLTSSYYRGAQGVI+VYDVTRR+TFTNL+D+WAKEIDLYSTNQDCIK
Sbjct: 65   LAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIK 124

Query: 763  MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLV 584
            MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPSL+
Sbjct: 125  MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLL 184

Query: 583  AEGSAGGKKNIFKQKPPQTD 524
            AEGS+G +KNIFKQKPP++D
Sbjct: 185  AEGSSGVRKNIFKQKPPESD 204


>ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays] gi|195625924|gb|ACG34792.1|
            ras-related protein Rab-18 [Zea mays]
            gi|223972897|gb|ACN30636.1| unknown [Zea mays]
            gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea mays]
          Length = 215

 Score =  330 bits (845), Expect = 7e-88
 Identities = 163/205 (79%), Positives = 178/205 (86%)
 Frame = -1

Query: 1138 SSMALSNSSQPDFDYLFKLLMIGDSGVGKXXXXXSFTSDTFEDLSPTIGVDFXXXXXXXX 959
            SS + S S QP+FDYLFKLL+IGDSGVGK      FT+D+FEDLSPTIGVDF        
Sbjct: 4    SSSSSSLSQQPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIG 63

Query: 958  XXXXXLAIWDTAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLADVWAKEIDLYSTN 779
                 LAIWDTAGQERFRTLTSSYYRGAQGVI+VYDVTRR+TFTNL+D+WAKEIDLYSTN
Sbjct: 64   GKKLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTN 123

Query: 778  QDCIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 599
            QDCIKMLVGNKVDKESER VTKKEGI+FAREYGCLFLECSAKT+VNVEQCFEELVLKILD
Sbjct: 124  QDCIKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILD 183

Query: 598  TPSLVAEGSAGGKKNIFKQKPPQTD 524
            TPSL+A+ S+G KKNIFKQKPP+ D
Sbjct: 184  TPSLLADASSGAKKNIFKQKPPEAD 208


>ref|NP_175056.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
            gi|145324172|ref|NP_001077675.1| Ras-related protein
            Rab-18 [Arabidopsis thaliana]
            gi|186488925|ref|NP_001117435.1| Ras-related protein
            Rab-18 [Arabidopsis thaliana]
            gi|75097949|sp|O23657.1|RABC1_ARATH RecName:
            Full=Ras-related protein RABC1; Short=AtRABC1; AltName:
            Full=Ras-related protein Rab18; Short=AtRab18
            gi|7523663|gb|AAF63103.1|AC006423_4 AtRab18 [Arabidopsis
            thaliana] gi|13878001|gb|AAK44078.1|AF370263_1 putative
            GTP-binding protein RAB1Y [Arabidopsis thaliana]
            gi|2231312|gb|AAB61997.1| AtRab18 [Arabidopsis thaliana]
            gi|17104731|gb|AAL34254.1| putative GTP-binding protein
            RAB1Y [Arabidopsis thaliana] gi|21555736|gb|AAM63924.1|
            GTP-binding protein(RAB1Y), putative [Arabidopsis
            thaliana] gi|110743628|dbj|BAE99651.1| putative
            GTP-binding protein [Arabidopsis thaliana]
            gi|332193882|gb|AEE32003.1| Ras-related protein Rab-18
            [Arabidopsis thaliana] gi|332193883|gb|AEE32004.1|
            Ras-related protein Rab-18 [Arabidopsis thaliana]
            gi|332193884|gb|AEE32005.1| Ras-related protein Rab-18
            [Arabidopsis thaliana]
          Length = 212

 Score =  329 bits (844), Expect = 9e-88
 Identities = 163/199 (81%), Positives = 176/199 (88%)
 Frame = -1

Query: 1123 SNSSQPDFDYLFKLLMIGDSGVGKXXXXXSFTSDTFEDLSPTIGVDFXXXXXXXXXXXXX 944
            S+S QP+FDYLFK+L+IGDSGVGK     SFTS+TF+DLSPTIGVDF             
Sbjct: 3    SSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLK 62

Query: 943  LAIWDTAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLADVWAKEIDLYSTNQDCIK 764
            LAIWDTAGQERFRTLTSSYYRGAQG+I+VYDVTRRDTFTNL+D+WAKEIDLYSTNQDCIK
Sbjct: 63   LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIK 122

Query: 763  MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLV 584
            MLVGNKVDKESER V+KKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPSL 
Sbjct: 123  MLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLT 182

Query: 583  AEGSAGGKKNIFKQKPPQT 527
            AEGS+GGKKNIFKQ P QT
Sbjct: 183  AEGSSGGKKNIFKQNPAQT 201


>ref|XP_002893966.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
            lyrata] gi|297339808|gb|EFH70225.1| hypothetical protein
            ARALYDRAFT_473785 [Arabidopsis lyrata subsp. lyrata]
          Length = 212

 Score =  329 bits (844), Expect = 9e-88
 Identities = 163/199 (81%), Positives = 176/199 (88%)
 Frame = -1

Query: 1123 SNSSQPDFDYLFKLLMIGDSGVGKXXXXXSFTSDTFEDLSPTIGVDFXXXXXXXXXXXXX 944
            S+S QP+FDYLFK+L+IGDSGVGK     SFTS+TF+DLSPTIGVDF             
Sbjct: 3    SSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKKLK 62

Query: 943  LAIWDTAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLADVWAKEIDLYSTNQDCIK 764
            LAIWDTAGQERFRTLTSSYYRGAQG+I+VYDVTRRDTFTNL+D+WAKEIDLYSTNQDCIK
Sbjct: 63   LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIK 122

Query: 763  MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLV 584
            MLVGNKVDKESER V+KKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPSL 
Sbjct: 123  MLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLT 182

Query: 583  AEGSAGGKKNIFKQKPPQT 527
            AEGS+GGKKNIFKQ P QT
Sbjct: 183  AEGSSGGKKNIFKQNPAQT 201


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