BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000462
         (1248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA65042.1| chlorophyll a/b-binding protein CP26 in PS II [B...   320   4e-85
ref|NP_001105374.1| chlorophyll a/b-binding apoprotein CP26 prec...   313   8e-83
gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis...   313   8e-83
ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidops...   313   8e-83
ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arab...   313   8e-83

>emb|CAA65042.1| chlorophyll a/b-binding protein CP26 in PS II [Brassica juncea]
          Length = 283

 Score =  320 bits (821), Expect = 4e-85
 Identities = 170/256 (66%), Positives = 177/256 (69%)
 Frame = -2

Query: 1085 TFKTVALFXXXXXXXXXXXXXXXXANDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVA 906
            TFKTVALF                ANDELAKWYG DR+I+LP GLLDR EIPEYLNGEVA
Sbjct: 34   TFKTVALFSKKKPAPPPKAKTVSAANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVA 93

Query: 905  GDYGYDPFGLGKKPEDFAKYQGQELIHARWAMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 726
            GDYGYDPFGLGKKPE+FAKYQ  ELIHARWAM                            
Sbjct: 94   GDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGCIIPEALNKYGANCGPEAVWFKT 153

Query: 725  XXXXXXXXXLLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXEYYRITNGLDLEDKLHPGG 546
                     LLDGNTL+YFGKNIPIN               EYYRITNGLD EDKLHPGG
Sbjct: 154  GAL------LLDGNTLSYFGKNIPINLVLAVVGEVVLLGGAEYYRITNGLDFEDKLHPGG 207

Query: 545  PFDPLGLADDPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGN 366
            PFDPL LA DP+Q ALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGN
Sbjct: 208  PFDPLDLAKDPEQGALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGN 267

Query: 365  NLLTVISGSVERAPIL 318
            NLLTVI+G+ ERAP L
Sbjct: 268  NLLTVIAGTAERAPTL 283


>ref|NP_001105374.1| chlorophyll a/b-binding apoprotein CP26 precursor [Zea mays]
            gi|733456|gb|AAA64415.1| chlorophyll a/b-binding
            apoprotein CP26 precursor [Zea mays]
          Length = 283

 Score =  313 bits (801), Expect = 8e-83
 Identities = 160/231 (69%), Positives = 167/231 (72%)
 Frame = -2

Query: 1010 NDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVAGDYGYDPFGLGKKPEDFAKYQGQEL 831
            +DELAKWYG DR+IYLP GLLDR E+PEYL GEV GDYGYDPFGLGKKPEDFAKYQ  EL
Sbjct: 59   SDELAKWYGPDRRIYLPDGLLDRSEVPEYLTGEVPGDYGYDPFGLGKKPEDFAKYQAYEL 118

Query: 830  IHARWAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLDGNTLNYFGKNIPI 651
            IHARWAM                                     LLDGNTLNYFG +IPI
Sbjct: 119  IHARWAMLGAAGAVIPEACNKFGANCGPEAVWFKTGAL------LLDGNTLNYFGNSIPI 172

Query: 650  NXXXXXXXXXXXXXXXEYYRITNGLDLEDKLHPGGPFDPLGLADDPDQAALLKVKEIKNG 471
            N               EYYRITNGLDLEDKLHPGGPFDPLGLA DPDQAA+LKVKEIKNG
Sbjct: 173  NLVVAVIAEVVLVGGAEYYRITNGLDLEDKLHPGGPFDPLGLASDPDQAAILKVKEIKNG 232

Query: 470  RLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGNNLLTVISGSVERAPIL 318
            RLAMFSMFAFFIQAYVTGEGPVENL+KHLSDPFGNNLLTVISG+ ER P L
Sbjct: 233  RLAMFSMFAFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVISGAAERTPSL 283


>gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
          Length = 280

 Score =  313 bits (801), Expect = 8e-83
 Identities = 166/256 (64%), Positives = 175/256 (68%)
 Frame = -2

Query: 1085 TFKTVALFXXXXXXXXXXXXXXXXANDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVA 906
            TFKTVALF                 +DELAKWYG DR+I+LP GLLDR EIPEYLNGEVA
Sbjct: 32   TFKTVALFSKKKPAPAKSKAVSET-SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVA 90

Query: 905  GDYGYDPFGLGKKPEDFAKYQGQELIHARWAMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 726
            GDYGYDPFGLGKKPE+FAKYQ  ELIHARWAM                            
Sbjct: 91   GDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKT 150

Query: 725  XXXXXXXXXLLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXEYYRITNGLDLEDKLHPGG 546
                     LLDGNTLNYFGKNIPIN               EYYRITNGLD EDKLHPGG
Sbjct: 151  GAL------LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGSEYYRITNGLDFEDKLHPGG 204

Query: 545  PFDPLGLADDPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGN 366
            PFDPLGLA DP+Q ALLKVKEIKNGRLAMF+M  FFIQAYVTGEGPVENL+KHLSDPFGN
Sbjct: 205  PFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGN 264

Query: 365  NLLTVISGSVERAPIL 318
            NLLTVI+G+ ERAP L
Sbjct: 265  NLLTVIAGTAERAPTL 280


>ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
            gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName:
            Full=Chlorophyll a-b binding protein CP26, chloroplastic;
            AltName: Full=LHCB5; AltName: Full=LHCIIc; AltName:
            Full=Light-harvesting complex II protein 5; Flags:
            Precursor gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5
            protein [Arabidopsis thaliana]
            gi|11908106|gb|AAG41482.1|AF326900_1 putative chlorophyll
            a/b-binding protein [Arabidopsis thaliana]
            gi|12642916|gb|AAK00400.1|AF339718_1 putative chlorophyll
            a/b-binding protein [Arabidopsis thaliana]
            gi|14190463|gb|AAK55712.1|AF380631_1 AT4g10340/F24G24_140
            [Arabidopsis thaliana]
            gi|15983446|gb|AAL11591.1|AF424597_1 AT4g10340/F24G24_140
            [Arabidopsis thaliana] gi|4538963|emb|CAB39787.1|
            chlorophyll a/b-binding protein-like [Arabidopsis
            thaliana] gi|7267731|emb|CAB78157.1| chlorophyll
            a/b-binding protein-like [Arabidopsis thaliana]
            gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140
            [Arabidopsis thaliana] gi|332657469|gb|AEE82869.1|
            chlorophyll a-b binding protein CP26 [Arabidopsis
            thaliana]
          Length = 280

 Score =  313 bits (801), Expect = 8e-83
 Identities = 166/256 (64%), Positives = 175/256 (68%)
 Frame = -2

Query: 1085 TFKTVALFXXXXXXXXXXXXXXXXANDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVA 906
            TFKTVALF                 +DELAKWYG DR+I+LP GLLDR EIPEYLNGEVA
Sbjct: 32   TFKTVALFSKKKPAPAKSKAVSET-SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVA 90

Query: 905  GDYGYDPFGLGKKPEDFAKYQGQELIHARWAMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 726
            GDYGYDPFGLGKKPE+FAKYQ  ELIHARWAM                            
Sbjct: 91   GDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKT 150

Query: 725  XXXXXXXXXLLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXEYYRITNGLDLEDKLHPGG 546
                     LLDGNTLNYFGKNIPIN               EYYRITNGLD EDKLHPGG
Sbjct: 151  GAL------LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGG 204

Query: 545  PFDPLGLADDPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGN 366
            PFDPLGLA DP+Q ALLKVKEIKNGRLAMF+M  FFIQAYVTGEGPVENL+KHLSDPFGN
Sbjct: 205  PFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGN 264

Query: 365  NLLTVISGSVERAPIL 318
            NLLTVI+G+ ERAP L
Sbjct: 265  NLLTVIAGTAERAPTL 280


>ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
            lyrata] gi|297318345|gb|EFH48767.1| hypothetical protein
            ARALYDRAFT_489877 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  313 bits (801), Expect = 8e-83
 Identities = 166/256 (64%), Positives = 175/256 (68%)
 Frame = -2

Query: 1085 TFKTVALFXXXXXXXXXXXXXXXXANDELAKWYGADRKIYLPGGLLDRDEIPEYLNGEVA 906
            TFKTVALF                 +DELAKWYG DR+I+LP GLLDR EIPEYLNGEVA
Sbjct: 32   TFKTVALFSKKKPAPAKSKAVSET-SDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVA 90

Query: 905  GDYGYDPFGLGKKPEDFAKYQGQELIHARWAMXXXXXXXXXXXXXXXXXXXXXXXXXXXX 726
            GDYGYDPFGLGKKPE+FAKYQ  ELIHARWAM                            
Sbjct: 91   GDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKT 150

Query: 725  XXXXXXXXXLLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXEYYRITNGLDLEDKLHPGG 546
                     LLDGNTLNYFGKNIPIN               EYYRITNGLD EDKLHPGG
Sbjct: 151  GAL------LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGG 204

Query: 545  PFDPLGLADDPDQAALLKVKEIKNGRLAMFSMFAFFIQAYVTGEGPVENLSKHLSDPFGN 366
            PFDPLGLA DP+Q ALLKVKEIKNGRLAMF+M  FFIQAYVTGEGPVENL+KHLSDPFGN
Sbjct: 205  PFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGN 264

Query: 365  NLLTVISGSVERAPIL 318
            NLLTVI+G+ ERAP L
Sbjct: 265  NLLTVIAGTAERAPTL 280