BLASTX nr result

ID: Papaver23_contig00000281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000281
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotei...   105   6e-32
emb|CBI36876.3| unnamed protein product [Vitis vinifera]              105   6e-32
ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arab...   110   9e-31
ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuc...   113   2e-30
ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotei...   113   2e-30

>ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
          Length = 245

 Score =  105 bits (263), Expect(2) = 6e-32
 Identities = 53/76 (69%), Positives = 60/76 (78%)
 Frame = +3

Query: 240 ILFFENLPHETTPGQLQIVLSHYHGFKEVRMIDAKPGIAFVEFGDEMQSTVAMQALQGFK 419
           ILF +NLPHE TP  LQ+    Y GFKEVRM++AKPGIAFVE+GDEMQSTVAMQ LQG K
Sbjct: 172 ILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLK 231

Query: 420 MTPQAQNQVLITYAKK 467
           +    QN +LITYAKK
Sbjct: 232 I--NQQNPMLITYAKK 245



 Score = 57.0 bits (136), Expect(2) = 6e-32
 Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
 Frame = +1

Query: 1   RKKHDERADRKRREQHQDASQSMGLNAPYSGPYGAAVPL---PYLGG 132
           R++HD+RA RKRREQH      +G+N  Y G YGAA PL   PYLGG
Sbjct: 111 RRRHDDRAGRKRREQHDANQAGVGVNPAYGGAYGAAPPLSQIPYLGG 157


>emb|CBI36876.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  105 bits (263), Expect(2) = 6e-32
 Identities = 53/76 (69%), Positives = 60/76 (78%)
 Frame = +3

Query: 240 ILFFENLPHETTPGQLQIVLSHYHGFKEVRMIDAKPGIAFVEFGDEMQSTVAMQALQGFK 419
           ILF +NLPHE TP  LQ+    Y GFKEVRM++AKPGIAFVE+GDEMQSTVAMQ LQG K
Sbjct: 159 ILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQGLQGLK 218

Query: 420 MTPQAQNQVLITYAKK 467
           +    QN +LITYAKK
Sbjct: 219 I--NQQNPMLITYAKK 232



 Score = 57.0 bits (136), Expect(2) = 6e-32
 Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
 Frame = +1

Query: 1   RKKHDERADRKRREQHQDASQSMGLNAPYSGPYGAAVPL---PYLGG 132
           R++HD+RA RKRREQH      +G+N  Y G YGAA PL   PYLGG
Sbjct: 98  RRRHDDRAGRKRREQHDANQAGVGVNPAYGGAYGAAPPLSQIPYLGG 144


>ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
           lyrata] gi|297326152|gb|EFH56572.1| hypothetical protein
           ARALYDRAFT_483938 [Arabidopsis lyrata subsp. lyrata]
          Length = 249

 Score =  110 bits (276), Expect(2) = 9e-31
 Identities = 56/76 (73%), Positives = 63/76 (82%)
 Frame = +3

Query: 240 ILFFENLPHETTPGQLQIVLSHYHGFKEVRMIDAKPGIAFVEFGDEMQSTVAMQALQGFK 419
           ILF +NLPHETTP  LQ++   Y GFKEVRM++AKPGIAFVEF DEMQSTVAMQ LQGFK
Sbjct: 177 ILFVQNLPHETTPMVLQMLFYQYQGFKEVRMVEAKPGIAFVEFADEMQSTVAMQGLQGFK 236

Query: 420 MTPQAQNQVLITYAKK 467
           +    QNQ+LITYAKK
Sbjct: 237 I---QQNQMLITYAKK 249



 Score = 48.1 bits (113), Expect(2) = 9e-31
 Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 4/49 (8%)
 Frame = +1

Query: 1   RKKHDERADRKRREQHQDASQ-SMGLNAPYSGPYGAAVPL---PYLGGV 135
           RK+H+E+  +K+++ H D++Q  M  N+ Y G YGAA PL   PY GGV
Sbjct: 115 RKRHEEKGGKKKKDHHHDSTQMGMATNSAYPGVYGAAPPLSQVPYPGGV 163


>ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
           A-like [Cucumis sativus]
          Length = 248

 Score =  113 bits (282), Expect(2) = 2e-30
 Identities = 56/76 (73%), Positives = 64/76 (84%)
 Frame = +3

Query: 240 ILFFENLPHETTPGQLQIVLSHYHGFKEVRMIDAKPGIAFVEFGDEMQSTVAMQALQGFK 419
           ILF +NLPHETTP  LQ++   Y GFKEVRM++AKPGIAFVE+ DE+QSTVAMQALQGFK
Sbjct: 175 ILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFK 234

Query: 420 MTPQAQNQVLITYAKK 467
           M P  QN +LITYAKK
Sbjct: 235 MNP--QNSMLITYAKK 248



 Score = 44.7 bits (104), Expect(2) = 2e-30
 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = +1

Query: 1   RKKHDERADRKRREQHQDASQSMGLNAPYSGPYGAAV--PLPYLGGV 135
           RK+H+E+  RK++EQH      MGLN  ++G YGA     +PY GGV
Sbjct: 118 RKRHEEKG-RKKKEQHDANQAGMGLNPAFAGAYGATAHSQVPYSGGV 163


>ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
           sativus]
          Length = 242

 Score =  113 bits (282), Expect(2) = 2e-30
 Identities = 56/76 (73%), Positives = 64/76 (84%)
 Frame = +3

Query: 240 ILFFENLPHETTPGQLQIVLSHYHGFKEVRMIDAKPGIAFVEFGDEMQSTVAMQALQGFK 419
           ILF +NLPHETTP  LQ++   Y GFKEVRM++AKPGIAFVE+ DE+QSTVAMQALQGFK
Sbjct: 169 ILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYSDEVQSTVAMQALQGFK 228

Query: 420 MTPQAQNQVLITYAKK 467
           M P  QN +LITYAKK
Sbjct: 229 MNP--QNSMLITYAKK 242



 Score = 44.7 bits (104), Expect(2) = 2e-30
 Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = +1

Query: 1   RKKHDERADRKRREQHQDASQSMGLNAPYSGPYGAAV--PLPYLGGV 135
           RK+H+E+  RK++EQH      MGLN  ++G YGA     +PY GGV
Sbjct: 112 RKRHEEKG-RKKKEQHDANQAGMGLNPAFAGAYGATAHSQVPYSGGV 157


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