BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000243
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein ...   268   4e-70
gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]      266   1e-69
gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I p...   266   1e-69
pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   266   1e-69
gb|AFK40061.1| unknown [Medicago truncatula]                          266   1e-69

>gb|AAW31511.1| light-harvesting chlorophyll-a/b binding protein Lhcb1 [Pisum
           sativum]
          Length = 266

 Score =  268 bits (684), Expect = 4e-70
 Identities = 131/133 (98%), Positives = 132/133 (99%)
 Frame = -3

Query: 401 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHA 222
           RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHA
Sbjct: 96  RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155

Query: 221 QSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL 42
           QSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL
Sbjct: 156 QSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL 215

Query: 41  KNGRLAMFSMFGF 3
           KNGRLAMFSMFGF
Sbjct: 216 KNGRLAMFSMFGF 228


>gb|AAC25775.1| chlorophyll a/b binding protein [Medicago sativa]
          Length = 266

 Score =  266 bits (681), Expect = 1e-69
 Identities = 130/133 (97%), Positives = 132/133 (99%)
 Frame = -3

Query: 401 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHA 222
           RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHA
Sbjct: 96  RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155

Query: 221 QSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL 42
           QSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEL
Sbjct: 156 QSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEL 215

Query: 41  KNGRLAMFSMFGF 3
           KNGRLAMFSMFGF
Sbjct: 216 KNGRLAMFSMFGF 228


>gb|AAB87573.1| chlorophyll a/b binding protein of LHCII type I precursor [Panax
           ginseng]
          Length = 266

 Score =  266 bits (681), Expect = 1e-69
 Identities = 130/133 (97%), Positives = 132/133 (99%)
 Frame = -3

Query: 401 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHA 222
           RELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHA
Sbjct: 96  RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155

Query: 221 QSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL 42
           QSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL
Sbjct: 156 QSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL 215

Query: 41  KNGRLAMFSMFGF 3
           KNGRLAMFSMFGF
Sbjct: 216 KNGRLAMFSMFGF 228


>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  266 bits (681), Expect = 1e-69
 Identities = 130/133 (97%), Positives = 132/133 (99%)
 Frame = -3

Query: 401 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHA 222
           RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHA
Sbjct: 62  RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 121

Query: 221 QSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL 42
           QSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEL
Sbjct: 122 QSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEL 181

Query: 41  KNGRLAMFSMFGF 3
           KNGRLAMFSMFGF
Sbjct: 182 KNGRLAMFSMFGF 194


>gb|AFK40061.1| unknown [Medicago truncatula]
          Length = 266

 Score =  266 bits (681), Expect = 1e-69
 Identities = 130/133 (97%), Positives = 132/133 (99%)
 Frame = -3

Query: 401 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNSSLVHA 222
           RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGN SLVHA
Sbjct: 96  RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155

Query: 221 QSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEL 42
           QSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLA+DPEAFAELKVKEL
Sbjct: 156 QSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEL 215

Query: 41  KNGRLAMFSMFGF 3
           KNGRLAMFSMFGF
Sbjct: 216 KNGRLAMFSMFGF 228