BLASTX nr result

ID: Papaver23_contig00000213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000213
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187210.1| 60S ribosomal protein L18-2 [Arabidopsis thalia...   291   1e-76
gb|AAA69928.1| cytoplasmic ribosomal protein L18 [Arabidopsis th...   290   3e-76
ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259...   289   5e-76
emb|CBI39539.3| unnamed protein product [Vitis vinifera]              289   5e-76
emb|CAN65685.1| hypothetical protein VITISV_022459 [Vitis vinifera]   289   5e-76

>ref|NP_187210.1| 60S ribosomal protein L18-2 [Arabidopsis thaliana]
           gi|21431838|sp|P42791.2|RL182_ARATH RecName: Full=60S
           ribosomal protein L18-2
           gi|6714451|gb|AAF26138.1|AC011620_14 putative 60S
           ribosomal protein L18 [Arabidopsis thaliana]
           gi|14335090|gb|AAK59824.1| AT3g05590/F18C1_14
           [Arabidopsis thaliana] gi|16974509|gb|AAL31164.1|
           AT3g05590/F18C1_14 [Arabidopsis thaliana]
           gi|332640742|gb|AEE74263.1| 60S ribosomal protein L18-2
           [Arabidopsis thaliana]
          Length = 187

 Score =  291 bits (744), Expect = 1e-76
 Identities = 151/188 (80%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
 Frame = +3

Query: 117 MGIDLIAGGKSKKTKRTAPKSDDIXXXXXXXXXXXXXXXTGSKFNGVILKRLFMSKVNKA 296
           MGIDLIAGGKSKKTKRTAPKSDD+               T SKFNGVILKRLFMSKVNKA
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 297 PLSLSRLIKFMDNKGEKIGVLVGTVTDDVRIVKEVPKMKIAALRFTETARARIEKAGGEC 476
           PLSLSRL++FM  K +KI VLVGT+TDD+R V E+P MK+ ALRFTE ARARIEKAGGEC
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLR-VHEIPAMKVTALRFTERARARIEKAGGEC 119

Query: 477 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG-APGVPHSHSKPYVRSKGRKFEKARGK 653
           LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG APGVPHSHSKPYVR+KGRKFEKARGK
Sbjct: 120 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGK 179

Query: 654 RNSRGFRV 677
           R SRGF+V
Sbjct: 180 RKSRGFKV 187


>gb|AAA69928.1| cytoplasmic ribosomal protein L18 [Arabidopsis thaliana]
          Length = 187

 Score =  290 bits (741), Expect = 3e-76
 Identities = 150/188 (79%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
 Frame = +3

Query: 117 MGIDLIAGGKSKKTKRTAPKSDDIXXXXXXXXXXXXXXXTGSKFNGVILKRLFMSKVNKA 296
           MGIDLIAGGKSKKTKRTAPKSDD+               T SKFNGVILKRLFMSKVN+A
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNRA 60

Query: 297 PLSLSRLIKFMDNKGEKIGVLVGTVTDDVRIVKEVPKMKIAALRFTETARARIEKAGGEC 476
           PLSLSRL++FM  K +KI VLVGT+TDD+R V E+P MK+ ALRFTE ARARIEKAGGEC
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLR-VHEIPAMKVTALRFTERARARIEKAGGEC 119

Query: 477 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG-APGVPHSHSKPYVRSKGRKFEKARGK 653
           LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG APGVPHSHSKPYVR+KGRKFEKARGK
Sbjct: 120 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGK 179

Query: 654 RNSRGFRV 677
           R SRGF+V
Sbjct: 180 RKSRGFKV 187


>ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259659 [Vitis vinifera]
          Length = 429

 Score =  289 bits (739), Expect = 5e-76
 Identities = 150/188 (79%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
 Frame = +3

Query: 117 MGIDLIAGGKSKKTKRTAPKSDDIXXXXXXXXXXXXXXXTGSKFNGVILKRLFMSKVNKA 296
           MGIDL+AGGKSKKTKRTAPKSDDI               TGSKFN VILKRLFMSKVNK 
Sbjct: 243 MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 302

Query: 297 PLSLSRLIKFMDNKGEKIGVLVGTVTDDVRIVKEVPKMKIAALRFTETARARIEKAGGEC 476
           PLSLSRL+++M  K  KI V+VGTVTDD+R V EVP +K+ ALRFTETARARIEKAGGEC
Sbjct: 303 PLSLSRLVRYMGGKEGKIAVVVGTVTDDIR-VYEVPALKVTALRFTETARARIEKAGGEC 361

Query: 477 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG-APGVPHSHSKPYVRSKGRKFEKARGK 653
           LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG APGVPHSH+KPYVRSKGRKFE+ARG+
Sbjct: 362 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGR 421

Query: 654 RNSRGFRV 677
           RNSRGFRV
Sbjct: 422 RNSRGFRV 429


>emb|CBI39539.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  289 bits (739), Expect = 5e-76
 Identities = 150/188 (79%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
 Frame = +3

Query: 117 MGIDLIAGGKSKKTKRTAPKSDDIXXXXXXXXXXXXXXXTGSKFNGVILKRLFMSKVNKA 296
           MGIDL+AGGKSKKTKRTAPKSDDI               TGSKFN VILKRLFMSKVNK 
Sbjct: 63  MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 122

Query: 297 PLSLSRLIKFMDNKGEKIGVLVGTVTDDVRIVKEVPKMKIAALRFTETARARIEKAGGEC 476
           PLSLSRL+++M  K  KI V+VGTVTDD+R V EVP +K+ ALRFTETARARIEKAGGEC
Sbjct: 123 PLSLSRLVRYMGGKEGKIAVVVGTVTDDIR-VYEVPALKVTALRFTETARARIEKAGGEC 181

Query: 477 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG-APGVPHSHSKPYVRSKGRKFEKARGK 653
           LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG APGVPHSH+KPYVRSKGRKFE+ARG+
Sbjct: 182 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGR 241

Query: 654 RNSRGFRV 677
           RNSRGFRV
Sbjct: 242 RNSRGFRV 249


>emb|CAN65685.1| hypothetical protein VITISV_022459 [Vitis vinifera]
          Length = 187

 Score =  289 bits (739), Expect = 5e-76
 Identities = 150/188 (79%), Positives = 161/188 (85%), Gaps = 1/188 (0%)
 Frame = +3

Query: 117 MGIDLIAGGKSKKTKRTAPKSDDIXXXXXXXXXXXXXXXTGSKFNGVILKRLFMSKVNKA 296
           MGIDL+AGGKSKKTKRTAPKSDDI               TGSKFN VILKRLFMSKVNK 
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 297 PLSLSRLIKFMDNKGEKIGVLVGTVTDDVRIVKEVPKMKIAALRFTETARARIEKAGGEC 476
           PLSLSRL+++M  K  KI V+VGTVTDD+R V EVP +K+ ALRFTETARARIEKAGGEC
Sbjct: 61  PLSLSRLVRYMGGKEGKIAVVVGTVTDDIR-VYEVPALKVTALRFTETARARIEKAGGEC 119

Query: 477 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG-APGVPHSHSKPYVRSKGRKFEKARGK 653
           LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFG APGVPHSH+KPYVRSKGRKFE+ARG+
Sbjct: 120 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGR 179

Query: 654 RNSRGFRV 677
           RNSRGFRV
Sbjct: 180 RNSRGFRV 187


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