BLASTX nr result

ID: Papaver23_contig00000200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00000200
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP5536...   272   1e-70
ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|2235512...   271   2e-70
ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|2235512...   265   1e-68
gb|ABK96569.1| unknown [Populus trichocarpa x Populus deltoides]      265   2e-68
ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|1...   265   2e-68

>gb|AFM75900.1| GSK1 [Gossypium hirsutum] gi|399912953|gb|AFP55363.1| SKP1-like
           protein [Gossypium hirsutum]
          Length = 156

 Score =  272 bits (695), Expect = 1e-70
 Identities = 135/154 (87%), Positives = 142/154 (92%)
 Frame = -2

Query: 854 STEKKVTLKSSDGETFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCK 675
           S+ +K+TLKSSDGE+F+VDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCK
Sbjct: 3   SSGRKITLKSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYCK 62

Query: 674 KHVENPKGDDRSADDELKNWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 495
           KHVE PK DDRSADDELK+WDA+FVKVDQATLFDLILAANYLNIK LLDLTCQTVADMIK
Sbjct: 63  KHVEAPKTDDRSADDELKSWDADFVKVDQATLFDLILAANYLNIKGLLDLTCQTVADMIK 122

Query: 494 GKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 393
           GKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 123 GKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 156


>ref|XP_002510576.1| skp1, putative [Ricinus communis] gi|223551277|gb|EEF52763.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  271 bits (692), Expect = 2e-70
 Identities = 137/157 (87%), Positives = 141/157 (89%), Gaps = 2/157 (1%)
 Frame = -2

Query: 857 MSTEKKVTLKSSDGETFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 678
           MST +K+TLKSSDGETF+VDEAVALESQTIKHMIEDDCADNGIPLPNVTSKIL+KVIEYC
Sbjct: 1   MSTSRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYC 60

Query: 677 KKHVENPKGDDR--SADDELKNWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 504
           KKHVE  K DDR  S DDELK WDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVETSKSDDRPSSVDDELKTWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 503 MIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 393
           MIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|223551278|gb|EEF52764.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  265 bits (677), Expect = 1e-68
 Identities = 134/157 (85%), Positives = 141/157 (89%), Gaps = 2/157 (1%)
 Frame = -2

Query: 857 MSTEKKVTLKSSDGETFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 678
           MS  KK+TLKSSDGETF+V+E VALESQTIKHMIEDDCAD+GIPLPNVTSKIL+KVIEYC
Sbjct: 1   MSAGKKITLKSSDGETFEVEELVALESQTIKHMIEDDCADSGIPLPNVTSKILSKVIEYC 60

Query: 677 KKHVENPKGDDR--SADDELKNWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 504
           KKHVE PK +DR  SADD+LK WDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD
Sbjct: 61  KKHVETPKSEDRPSSADDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 120

Query: 503 MIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 393
           MIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


>gb|ABK96569.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 158

 Score =  265 bits (676), Expect = 2e-68
 Identities = 132/158 (83%), Positives = 141/158 (89%), Gaps = 3/158 (1%)
 Frame = -2

Query: 857 MSTEKKVTLKSSDGETFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 678
           MS+ +K++L+SSDGE+F+VDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC
Sbjct: 1   MSSGRKISLRSSDGESFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 60

Query: 677 KKHVENPKGDDR---SADDELKNWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 507
           KKHVE PK +DR   S DDELKNWD EFV+VDQATLFDLILAANYLNIK LLDLTCQTVA
Sbjct: 61  KKHVETPKSEDRGTNSGDDELKNWDTEFVRVDQATLFDLILAANYLNIKGLLDLTCQTVA 120

Query: 506 DMIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 393
           DMIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 121 DMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 158


>ref|XP_002301954.1| predicted protein [Populus trichocarpa] gi|118485200|gb|ABK94461.1|
           unknown [Populus trichocarpa]
           gi|222843680|gb|EEE81227.1| predicted protein [Populus
           trichocarpa]
          Length = 157

 Score =  265 bits (676), Expect = 2e-68
 Identities = 133/157 (84%), Positives = 141/157 (89%), Gaps = 2/157 (1%)
 Frame = -2

Query: 857 MSTEKKVTLKSSDGETFDVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILAKVIEYC 678
           MS+ +K TLKSSDGE F+VDEAVALESQTIKHMIE+DCADN IPLPNVTSKIL+KVIEYC
Sbjct: 1   MSSSRKFTLKSSDGEAFEVDEAVALESQTIKHMIEEDCADNAIPLPNVTSKILSKVIEYC 60

Query: 677 KKHVENPKGDDR--SADDELKNWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVAD 504
           KKHVE PK DDR  SADD+LK+WDAEFVKVDQATLFDLILAANYLNIK+LLDLTCQTVAD
Sbjct: 61  KKHVETPKSDDRPSSADDDLKSWDAEFVKVDQATLFDLILAANYLNIKNLLDLTCQTVAD 120

Query: 503 MIKGKTPEEIRKTFNIKNDFTPXXXXXXXXENQWAFE 393
           MIKGKTPEEIRKTFNIKNDFTP        ENQWAFE
Sbjct: 121 MIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 157


Top